Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0238
         (657 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC067474-1|AAH67474.1|  423|Homo sapiens G protein-coupled recep...    31   3.6  
BC067473-1|AAH67473.1|  423|Homo sapiens G protein-coupled recep...    31   3.6  
AF236081-1|AAF43705.1|  423|Homo sapiens orphan G-protein couple...    31   3.6  
AB040973-1|BAA96064.1|  424|Homo sapiens KIAA1540 protein protein.     31   3.6  

>BC067474-1|AAH67474.1|  423|Homo sapiens G protein-coupled receptor
           83 protein.
          Length = 423

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
 Frame = -2

Query: 293 LARPLALLKSMGDVTTQHHVGRRIHKKTSVNCALIYIYRKSKSHSTLNSFFLLLTR---T 123
           +A+ L L   +GDVTT+ +   R  KK ++   ++ +   +     LN + LLL+     
Sbjct: 262 VAKKLWLCNMIGDVTTEQYFALRRKKKKTIKMLMLVVVLFALCWFPLNCYVLLLSSKVIR 321

Query: 122 TNFQSYF 102
           TN   YF
Sbjct: 322 TNNALYF 328


>BC067473-1|AAH67473.1|  423|Homo sapiens G protein-coupled receptor
           83 protein.
          Length = 423

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
 Frame = -2

Query: 293 LARPLALLKSMGDVTTQHHVGRRIHKKTSVNCALIYIYRKSKSHSTLNSFFLLLTR---T 123
           +A+ L L   +GDVTT+ +   R  KK ++   ++ +   +     LN + LLL+     
Sbjct: 262 VAKKLWLCNMIGDVTTEQYFALRRKKKKTIKMLMLVVVLFALCWFPLNCYVLLLSSKVIR 321

Query: 122 TNFQSYF 102
           TN   YF
Sbjct: 322 TNNALYF 328


>AF236081-1|AAF43705.1|  423|Homo sapiens orphan G-protein coupled
           receptor GPR72 protein.
          Length = 423

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
 Frame = -2

Query: 293 LARPLALLKSMGDVTTQHHVGRRIHKKTSVNCALIYIYRKSKSHSTLNSFFLLLTR---T 123
           +A+ L L   +GDVTT+ +   R  KK ++   ++ +   +     LN + LLL+     
Sbjct: 262 VAKKLWLCNMIGDVTTEQYFALRRKKKKTIKMLMLVVVLFALCWFPLNCYVLLLSSKVIR 321

Query: 122 TNFQSYF 102
           TN   YF
Sbjct: 322 TNNALYF 328


>AB040973-1|BAA96064.1|  424|Homo sapiens KIAA1540 protein protein.
          Length = 424

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
 Frame = -2

Query: 293 LARPLALLKSMGDVTTQHHVGRRIHKKTSVNCALIYIYRKSKSHSTLNSFFLLLTR---T 123
           +A+ L L   +GDVTT+ +   R  KK ++   ++ +   +     LN + LLL+     
Sbjct: 263 VAKKLWLCNMIGDVTTEQYFALRRKKKKTIKMLMLVVVLFALCWFPLNCYVLLLSSKVIR 322

Query: 122 TNFQSYF 102
           TN   YF
Sbjct: 323 TNNALYF 329


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,829,572
Number of Sequences: 237096
Number of extensions: 1975370
Number of successful extensions: 3264
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3264
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)