Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0230
(660 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71; Eukaryo... 143 4e-33
UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellul... 136 6e-31
UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeb... 117 2e-25
UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep: ... 116 4e-25
UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma j... 106 4e-22
UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3; Euka... 105 7e-22
UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6; Thermop... 81 3e-14
UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella... 74 3e-12
UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3; Archaea... 73 5e-12
UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12; Archae... 73 8e-12
UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17; Euryar... 68 2e-10
UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8 ... 68 2e-10
UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10; Archae... 67 3e-10
UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1; ... 65 2e-09
UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1; Encephal... 62 9e-09
UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1; Nanoarc... 61 3e-08
UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus N... 59 8e-08
UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90; Bacteri... 59 8e-08
UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellul... 57 3e-07
UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular... 54 3e-06
UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2; n... 53 7e-06
UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2; Crenarchaeot... 51 2e-05
UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4; Thermop... 51 3e-05
UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1; ... 49 9e-05
UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1; ... 48 2e-04
UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellul... 48 2e-04
UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and org... 48 3e-04
UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus ... 47 5e-04
UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellul... 46 6e-04
UniRef50_A3LNH9 Cluster: Predicted protein; n=5; Saccharomycetac... 45 0.001
UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17; Bacteri... 44 0.003
UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5; Tracheophyta... 44 0.004
UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome. prec... 43 0.008
UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6; Eurotiom... 43 0.008
UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;... 43 0.008
UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole gen... 42 0.010
UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep... 40 0.040
UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondri... 39 0.093
UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;... 39 0.12
UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular org... 38 0.16
UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis ... 38 0.21
UniRef50_Q5DC89 Cluster: SJCHGC02322 protein; n=1; Schistosoma j... 38 0.21
UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2; Fi... 38 0.21
UniRef50_Q2HAK3 Cluster: Putative uncharacterized protein; n=1; ... 37 0.37
UniRef50_Q8A920 Cluster: Putative uncharacterized protein; n=4; ... 37 0.49
UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep... 36 0.65
UniRef50_A6ECP8 Cluster: Ferrichrome-iron receptor; n=1; Pedobac... 36 0.86
UniRef50_Q5IX18 Cluster: 50S ribosomal protein L2; n=1; Protothe... 36 1.1
UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-P... 36 1.1
UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10; Magnoli... 35 1.5
UniRef50_A5DY19 Cluster: 60S ribosomal protein RML2, mitochondri... 35 1.5
UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;... 35 1.5
UniRef50_Q4S2E6 Cluster: Chromosome 17 SCAF14762, whole genome s... 35 2.0
UniRef50_Q8MYY5 Cluster: RE45450p; n=6; Endopterygota|Rep: RE454... 35 2.0
UniRef50_O45110 Cluster: Putative uncharacterized protein; n=2; ... 34 2.6
UniRef50_Q5T653 Cluster: 39S ribosomal protein L2, mitochondrial... 34 2.6
UniRef50_UPI00003617AD Cluster: 39S ribosomal protein L2, mitoch... 34 3.5
UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2; Streptophyti... 34 3.5
UniRef50_A1G8A1 Cluster: Major facilitator superfamily MFS_1; n=... 33 4.6
UniRef50_A7QZU6 Cluster: Chromosome undetermined scaffold_288, w... 33 6.1
UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria tene... 33 6.1
UniRef50_A3LYD9 Cluster: Hypothetical transcription factor; n=1;... 33 6.1
UniRef50_A1G6E0 Cluster: NAD/FAD-dependent oxidoreductase-like; ... 33 8.0
UniRef50_Q2LCR9 Cluster: Ribosomal protein L2; n=3; Dictyostelii... 33 8.0
UniRef50_Q6CGS9 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 33 8.0
UniRef50_Q9UHJ6 Cluster: Carbohydrate kinase-like protein; n=18;... 33 8.0
>UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71;
Eukaryota|Rep: 60S ribosomal protein L8 - Drosophila
melanogaster (Fruit fly)
Length = 256
Score = 143 bits (346), Expect = 4e-33
Identities = 83/169 (49%), Positives = 96/169 (56%), Gaps = 1/169 (0%)
Frame = +1
Query: 46 AQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDP 225
AQRKGAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPGRGAPLAVVHFRDP
Sbjct: 7 AQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAVVHFRDP 66
Query: 226 YKFKTRKELLLLPKGSTQANLFIVERKQXXXXXXXXXXXXXXRVPLCAILKRKWVIEVVW 405
Y++K RKEL + P+G RK + L+ K
Sbjct: 67 YRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRL 126
Query: 406 HVPLETSPL*LDTILMLSRQE*SYPSGAKKVC-HQEQSMVGIVAGGGRI 549
+ + PSGAKKV ++MVGIVAGGGRI
Sbjct: 127 ARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRI 175
Score = 141 bits (342), Expect = 1e-32
Identities = 70/109 (64%), Positives = 83/109 (76%), Gaps = 2/109 (1%)
Frame = +3
Query: 255 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATV 434
IAPEG++TGQFVYCG+KATL++GNVMP+ MPEGTI+CNLEEK GDRGRLAR SGN+ATV
Sbjct: 77 IAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATV 136
Query: 435 IGHNPDAKPSRVKLPVWSQEGLPS--RTEHGRYCCWRWTYCKPILKAGR 575
I HN D K +RVKLP +++ +PS R G KPILKAGR
Sbjct: 137 IAHNQDTKKTRVKLPSGAKKVVPSANRAMVG-IVAGGGRIDKPILKAGR 184
>UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellular
organisms|Rep: 60S ribosomal protein L8 - Homo sapiens
(Human)
Length = 257
Score = 136 bits (328), Expect = 6e-31
Identities = 70/109 (64%), Positives = 81/109 (74%), Gaps = 2/109 (1%)
Frame = +3
Query: 255 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATV 434
IA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATV
Sbjct: 77 IAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATV 136
Query: 435 IGHNPDAKPSRVKLPVWSQEGLPS--RTEHGRYCCWRWTYCKPILKAGR 575
I HNP+ K +RVKLP S++ + S R G KPILKAGR
Sbjct: 137 ISHNPETKKTRVKLPSGSKKVISSANRAVVG-VVAGGGRIDKPILKAGR 184
Score = 126 bits (303), Expect = 6e-28
Identities = 72/169 (42%), Positives = 99/169 (58%), Gaps = 2/169 (1%)
Frame = +1
Query: 49 QRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPY 228
QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY
Sbjct: 8 QRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPY 67
Query: 229 KFKTRKELLLLPKG-STQANLFIVERKQXXXXXXXXXXXXXXRVPLCAILKRKWVIEVVW 405
+FK R EL + +G T ++ ++ Q +C + ++ +
Sbjct: 68 RFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLA 127
Query: 406 HVPLETSPL*LDTILMLSRQE*SYPSGAKKVCHQ-EQSMVGIVAGGGRI 549
+ + + + PSG+KKV +++VG+VAGGGRI
Sbjct: 128 RASGNYATV-ISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRI 175
>UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeba
histolytica|Rep: 60S ribosomal protein L8 - Entamoeba
histolytica
Length = 158
Score = 117 bits (282), Expect = 2e-25
Identities = 50/81 (61%), Positives = 65/81 (80%)
Frame = +3
Query: 237 DKEGALIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARAS 416
DKE I EGLY+GQ++YCG KA+L +GNV+P+G PEGT+VCN+E K GDRG +ARAS
Sbjct: 63 DKE-LFICAEGLYSGQYIYCGSKASLHIGNVLPIGQCPEGTVVCNVESKPGDRGIIARAS 121
Query: 417 GNFATVIGHNPDAKPSRVKLP 479
GN+ATVI HN D + +R++LP
Sbjct: 122 GNYATVISHNADNETTRIRLP 142
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/40 (55%), Positives = 29/40 (72%)
Frame = +1
Query: 151 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELLLLPKG 270
+G+VK I HDPGRGAPLA V FR+P ++ KEL + +G
Sbjct: 33 RGLVKSIEHDPGRGAPLARVVFRNPRQYGLDKELFICAEG 72
>UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep:
Ribosomal protein - Codakia orbicularis
Length = 234
Score = 116 bits (280), Expect = 4e-25
Identities = 51/75 (68%), Positives = 61/75 (81%)
Frame = +1
Query: 46 AQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDP 225
+QRKG GSVF +HTK RKG LR++D+AERHGY+KGVVKDI+HDPGRGAPLA V FRDP
Sbjct: 7 SQRKGPGSVFKAHTKHRKGKAALRAVDFAERHGYVKGVVKDIVHDPGRGAPLAKVTFRDP 66
Query: 226 YKFKTRKELLLLPKG 270
YK+K R E + +G
Sbjct: 67 YKYKMRTETFIATEG 81
Score = 77.8 bits (183), Expect = 2e-13
Identities = 50/108 (46%), Positives = 60/108 (55%), Gaps = 1/108 (0%)
Frame = +3
Query: 255 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATV 434
IA EG+YTGQF+YCGKKA L++ RG+LARASGN+ATV
Sbjct: 77 IATEGMYTGQFIYCGKKANLQI------------------------RGKLARASGNYATV 112
Query: 435 IGHNPDAKPSRVKLPVWSQEGLPSRTEH-GRYCCWRWTYCKPILKAGR 575
I HNPD K SRVKLP S++ +PS KP+LKAGR
Sbjct: 113 ISHNPDTKKSRVKLPSGSKKVIPSANRAIVGIVAGGGRIDKPMLKAGR 160
>UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC07017 protein - Schistosoma
japonicum (Blood fluke)
Length = 112
Score = 106 bits (255), Expect = 4e-22
Identities = 48/67 (71%), Positives = 56/67 (83%)
Frame = +1
Query: 46 AQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDP 225
+QRKGAG VF +HTK RKGA +LR +D+AERHGYI+GVVK+IIHDPGRGAPLA V FRD
Sbjct: 3 SQRKGAGGVFKAHTKHRKGAARLRPVDFAERHGYIRGVVKEIIHDPGRGAPLAKVAFRDV 62
Query: 226 YKFKTRK 246
Y +K K
Sbjct: 63 YSYKLIK 69
>UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3;
Eukaryota|Rep: 60S ribosomal protein KD4/L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 123
Score = 105 bits (253), Expect = 7e-22
Identities = 51/87 (58%), Positives = 62/87 (71%)
Frame = +1
Query: 46 AQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDP 225
AQRK AGSVF SHT RKG K RSLD+ ER+GY+KGVV +IIHDPGRGAPLA V FR P
Sbjct: 7 AQRKVAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVTFRHP 66
Query: 226 YKFKTRKELLLLPKGSTQANLFIVERK 306
++FK +KEL + + T + +K
Sbjct: 67 FRFKKQKELFVXXEVCTPVSSLYCGKK 93
Score = 43.2 bits (97), Expect = 0.006
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +3
Query: 288 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDR 395
+YCGKKATL VGNV+P+ ++PEG + +G R
Sbjct: 88 LYCGKKATLVVGNVLPLRSIPEGAXCLQRRDHVGYR 123
>UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6;
Thermoproteales|Rep: 50S ribosomal protein L2P -
Pyrobaculum aerophilum
Length = 246
Score = 80.6 bits (190), Expect = 3e-14
Identities = 35/74 (47%), Positives = 51/74 (68%)
Frame = +3
Query: 258 APEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 437
A EGLY GQ V GK A+ + GN+M +G +PEGT++ N+E++ GD G+ ARA G +A VI
Sbjct: 70 AAEGLYVGQVVEIGKGASPKTGNIMILGEIPEGTMIFNVEKRAGDGGKFARAGGTYAVVI 129
Query: 438 GHNPDAKPSRVKLP 479
G P+ + ++LP
Sbjct: 130 GQKPEENKTIIRLP 143
Score = 33.9 bits (74), Expect = 3.5
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 49 QRKG-AGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVV 210
QR+G GS F S + KR G + L GY V DI+H+PG AP+A +
Sbjct: 8 QRRGRGGSQFRSPSWKRDGPVRYPPLGVISGKGY----VVDILHEPGLNAPVAKI 58
>UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella
natans|Rep: Ribosomal protein L8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 281
Score = 74.1 bits (174), Expect = 3e-12
Identities = 44/109 (40%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Frame = +3
Query: 255 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATV 434
IA E LY + + CG +A GNV+P+ +P G VCN+EEK GD G+LAR++G F V
Sbjct: 103 IAVEKLYLNKTIACGLQARPITGNVLPLFNIPNGVFVCNVEEKEGDGGKLARSAGAFVGV 162
Query: 435 IGHNPDAKPSRVKLPVWSQEGLPS--RTEHGRYCCWRWTYCKPILKAGR 575
+ H+ +++KLP + L S R G Y KP+LKAG+
Sbjct: 163 LSHSKYNNVTKLKLPSKKIKILSSFCRATIG-VVAGGGKYEKPLLKAGK 210
>UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3;
Archaea|Rep: 50S ribosomal protein L2P - Aeropyrum
pernix
Length = 238
Score = 73.3 bits (172), Expect = 5e-12
Identities = 47/122 (38%), Positives = 69/122 (56%), Gaps = 2/122 (1%)
Frame = +3
Query: 213 LPRSIQVQDKEGALIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGD 392
L R ++ E + A EG+Y GQ + G A E GN++P+G +PEGT V N+E + GD
Sbjct: 55 LARVVREDGVEFLMPAAEGMYVGQIIEIGPAAKPEAGNILPLGKIPEGTEVFNVELRPGD 114
Query: 393 RGRLARASGNFATVIGHNPDAKPSRVKLPVWSQEGLP--SRTEHGRYCCWRWTYCKPILK 566
G+LAR +G++A V+G AK + ++LP + +P SR G KPI+K
Sbjct: 115 GGKLARQAGSYALVVG-RAGAK-TILRLPSGKDKEVPNDSRATIG-IPAGAGRIEKPIMK 171
Query: 567 AG 572
AG
Sbjct: 172 AG 173
>UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12;
Archaea|Rep: 50S ribosomal protein L2P - Methanosarcina
acetivorans
Length = 238
Score = 72.5 bits (170), Expect = 8e-12
Identities = 31/76 (40%), Positives = 49/76 (64%)
Frame = +3
Query: 252 LIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFAT 431
L+A EG+ G + CG A ++ GN++P+G +PEG +CN+E K D G+ R+SG +AT
Sbjct: 69 LLASEGIAVGNIIECGDDAEVKPGNIVPIGNVPEGFFICNVESKPNDGGKFVRSSGVYAT 128
Query: 432 VIGHNPDAKPSRVKLP 479
V+ H +A + V +P
Sbjct: 129 VVTH--EATRTAVSMP 142
>UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17;
Euryarchaeota|Rep: 50S ribosomal protein L2P -
Methanopyrus kandleri
Length = 243
Score = 68.1 bits (159), Expect = 2e-10
Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Frame = +3
Query: 225 IQVQDKEGALI-APEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGR 401
++ +D E LI PEG G + CG A ++ GN +P+ +PEG + N+E + GD G+
Sbjct: 62 VRFEDGEERLILVPEGTKVGDIIECGVSAEIKPGNTLPLAEIPEGVPIFNIEGQPGDGGK 121
Query: 402 LARASGNFATVIGHNPDAKPSRVKLP 479
ARA G +AT+I H D + V+LP
Sbjct: 122 FARAPGCYATIIAH--DVGRTYVQLP 145
Score = 44.0 bits (99), Expect = 0.003
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +1
Query: 49 QRKGAGS-VFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDP 225
QR G G + + + + +G + R D E+ G + G V +++HDP R AP+A V F D
Sbjct: 8 QRLGRGGPTYRAPSHRYRGRIEHRPYDEQEKKGKVVGKVVELLHDPARNAPVARVRFED- 66
Query: 226 YKFKTRKELLLLPKGS 273
+ L+L+P+G+
Sbjct: 67 ----GEERLILVPEGT 78
>UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8
protein - Rattus norvegicus (Rat)
Length = 47
Score = 67.7 bits (158), Expect = 2e-10
Identities = 29/39 (74%), Positives = 35/39 (89%)
Frame = +1
Query: 49 QRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVK 165
QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VK
Sbjct: 8 QRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVK 46
>UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10;
Archaea|Rep: 50S ribosomal protein L2P - Sulfolobus
tokodaii
Length = 238
Score = 67.3 bits (157), Expect = 3e-10
Identities = 37/103 (35%), Positives = 56/103 (54%)
Frame = +3
Query: 264 EGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGH 443
+GL GQ + GK A + GN++ VG +PEGTI+ N+E+ GD G+ AR++G + V+G
Sbjct: 71 QGLVVGQKIQIGKNAAISNGNIVEVGNVPEGTIISNIEKTRGDGGKFARSAGTYGVVVGK 130
Query: 444 NPDAKPSRVKLPVWSQEGLPSRTEHGRYCCWRWTYCKPILKAG 572
D ++ +Q +R G T KP+LKAG
Sbjct: 131 TGDKVLVKLSSEKIAQVSSNARAIVGVVAGGGVTE-KPLLKAG 172
Score = 38.3 bits (85), Expect = 0.16
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +1
Query: 49 QRKGAGSV-FVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDP 225
QR G G + F S + +R G K+ +++ G G V DI+H+PG APLA++ D
Sbjct: 8 QRAGRGGINFRSPSWRRVGKAKIPNIE-----GEHIGKVIDIVHNPGTNAPLALIKLDDG 62
Query: 226 YKF 234
KF
Sbjct: 63 TKF 65
>UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L2P - Ignicoccus hospitalis KIN4/I
Length = 251
Score = 64.9 bits (151), Expect = 2e-09
Identities = 38/105 (36%), Positives = 58/105 (55%)
Frame = +3
Query: 258 APEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 437
A EG+YTGQ V G A GN++P+ A+PEGT + N+E + GD G+LAR+ G +A ++
Sbjct: 74 AAEGMYTGQKVQIGPNAAPVNGNILPLYAIPEGTQIFNVEIRPGDGGKLARSGGAYAILV 133
Query: 438 GHNPDAKPSRVKLPVWSQEGLPSRTEHGRYCCWRWTYCKPILKAG 572
G + ++ ++ Q +R G KP+LKAG
Sbjct: 134 GKSGNSAIIQLPSGKVKQVNAKARATIG-IAAGAGRDEKPLLKAG 177
>UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L8 -
Encephalitozoon cuniculi
Length = 239
Score = 62.5 bits (145), Expect = 9e-09
Identities = 26/85 (30%), Positives = 49/85 (57%)
Frame = +3
Query: 225 IQVQDKEGALIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRL 404
I ++ + + A EG+YTGQ + G A +++GN+ + +PEG V ++E GD G
Sbjct: 53 ISFKEDDCMVPASEGMYTGQKILIGDDAPIDIGNITKIKNVPEGMAVNSVESVYGDGGTF 112
Query: 405 ARASGNFATVIGHNPDAKPSRVKLP 479
A +G+++ V+ H + + +K+P
Sbjct: 113 AMVNGSYSLVVNHRKETNETVIKIP 137
>UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L2P -
Nanoarchaeum equitans
Length = 238
Score = 60.9 bits (141), Expect = 3e-08
Identities = 28/65 (43%), Positives = 41/65 (63%)
Frame = +3
Query: 243 EGALIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGN 422
+ L AP G+ G VY GK+A +G++ P+ +PEGT + LE GD G+L RASG+
Sbjct: 66 QSLLPAPLGISVGDTVYYGKEAPNAIGSIKPLSEIPEGTKIYMLENNPGDGGKLVRASGD 125
Query: 423 FATVI 437
FA ++
Sbjct: 126 FALLV 130
>UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L2
- Candidatus Nitrosopumilus maritimus SCM1
Length = 244
Score = 59.3 bits (137), Expect = 8e-08
Identities = 28/71 (39%), Positives = 43/71 (60%)
Frame = +3
Query: 267 GLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHN 446
G G+ + G K+ +E GNV+ + +P+GTIVCN+E+ GD G + +++G ATV H
Sbjct: 75 GAKVGETLQFGLKSKIEKGNVISIQNIPDGTIVCNIEKHFGDGGAIVKSAGTDATVFSHG 134
Query: 447 PDAKPSRVKLP 479
+ VKLP
Sbjct: 135 DEG--VTVKLP 143
>UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90;
Bacteria|Rep: 50S ribosomal protein L2 - Lactobacillus
plantarum
Length = 279
Score = 59.3 bits (137), Expect = 8e-08
Identities = 26/63 (41%), Positives = 43/63 (68%)
Frame = +3
Query: 252 LIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFAT 431
++AP+GL G V G +A ++VGN +P+ +P GT++ N+E K G G+LAR++G A
Sbjct: 104 ILAPKGLEVGMQVQSGAEADIKVGNALPLTNIPVGTVIHNIELKPGKGGQLARSAGTSAQ 163
Query: 432 VIG 440
++G
Sbjct: 164 LLG 166
>UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellular
organisms|Rep: 50S ribosomal protein L2 - Brucella
melitensis
Length = 277
Score = 57.2 bits (132), Expect = 3e-07
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Frame = +3
Query: 225 IQVQDKEGA-LIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGR 401
I+ D E A ++AP+ L G V G ++ GN MP+ +MP GTI+ N+E G G+
Sbjct: 94 IRYTDGELAYILAPQRLAVGDQVVAGNSVDVKPGNAMPLSSMPVGTIIHNVELMPGKGGQ 153
Query: 402 LARASGNFATVIGHN 446
+AR++G +A ++G +
Sbjct: 154 IARSAGTYAQLVGRD 168
>UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular
organisms|Rep: 50S ribosomal protein L2 - Mesoplasma
florum (Acholeplasma florum)
Length = 281
Score = 54.0 bits (124), Expect = 3e-06
Identities = 23/75 (30%), Positives = 45/75 (60%)
Frame = +3
Query: 252 LIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFAT 431
++ +G+ G + + A ++VGN P+ +PEGT++ N+E K G G++AR++G
Sbjct: 105 ILFAKGMTVGMKIVASEHADIKVGNAAPLKNIPEGTLIHNVELKPGKGGQMARSAGTSVQ 164
Query: 432 VIGHNPDAKPSRVKL 476
++G + D K ++L
Sbjct: 165 ILGKDDDGKYVTLRL 179
>UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2;
n=423; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 274
Score = 52.8 bits (121), Expect = 7e-06
Identities = 26/76 (34%), Positives = 44/76 (57%)
Frame = +3
Query: 252 LIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFAT 431
++ P G G + G + +++GN +P+ MP GT + N+E +G G+LARA+G A
Sbjct: 102 ILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGAVAK 161
Query: 432 VIGHNPDAKPSRVKLP 479
+I + K + +KLP
Sbjct: 162 LIA--KEGKSATLKLP 175
>UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2;
Crenarchaeota|Rep: Ribosomal protein L2 - Cenarchaeum
symbiosum
Length = 243
Score = 51.2 bits (117), Expect = 2e-05
Identities = 23/59 (38%), Positives = 35/59 (59%)
Frame = +3
Query: 267 GLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGH 443
G G + G K+ + GNV+ V +P+GT VCN+E+ GD G + +++G ATV H
Sbjct: 74 GTRVGSSMNFGLKSEIRDGNVISVQNIPDGTTVCNVEKHYGDGGAIVKSAGGNATVFSH 132
Score = 33.9 bits (74), Expect = 3.5
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +1
Query: 49 QRKGAGSV-FVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRD 222
+R+G G + F + T + K + + E+ +G V D++H+ GR APLA + F D
Sbjct: 8 RRRGRGGMQFRAATTGKIARAKYPAFELGEQR---EGTVIDLVHERGRDAPLAKIRFED 63
>UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L2P -
Thermoplasma volcanium
Length = 234
Score = 50.8 bits (116), Expect = 3e-05
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +3
Query: 255 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATV 434
IA G Y GQ + G T+ G + +P+G+ V N+E GD G R++G FA V
Sbjct: 65 IAFTGAYVGQKIVAGNVDTINPGTTTVLANIPDGSYVYNIESSPGDGGEFCRSAGTFALV 124
Query: 435 IGH 443
+ H
Sbjct: 125 VSH 127
>UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 185
Score = 49.2 bits (112), Expect = 9e-05
Identities = 22/55 (40%), Positives = 35/55 (63%)
Frame = -2
Query: 398 TSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACVEPFGSNKSSFLVL 234
T++TH + +AHNGTL S R +I+N + L+TI++L V G ++ FL+L
Sbjct: 7 TTVTHMVLNVAHNGTLGDGSKRQYIANNEIGLLATIDELVGVHALGGDEQLFLML 61
>UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 128
Score = 48.4 bits (110), Expect = 2e-04
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = +3
Query: 252 LIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEG 356
++ E +YTGQFV C KKATL V NV+P+ + PEG
Sbjct: 42 IVVAESIYTGQFVCCSKKATLIVDNVLPLRSTPEG 76
>UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellular
organisms|Rep: 50S ribosomal protein L2 - Aquifex
aeolicus
Length = 304
Score = 48.0 bits (109), Expect = 2e-04
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Frame = +3
Query: 252 LIAPEGLYTGQFVY--------CGKKAT-LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRL 404
+I PEGL G V GK ++ GN MP+ +PEGTIV N+E G G++
Sbjct: 120 IIWPEGLKVGDTVMSISWEDAEAGKPLPEIKPGNAMPLKYIPEGTIVHNIEFIPGKGGQI 179
Query: 405 ARASGNFATVIGHNPDAKPSRVKLP 479
ARA+G +A V+G + V++P
Sbjct: 180 ARAAGTWAQVLGRSTRKGYVLVRMP 204
>UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and
organelle form; n=5; cellular organisms|Rep: Ribosomal
protein L2, bacterial and organelle form - Ostreococcus
tauri
Length = 294
Score = 47.6 bits (108), Expect = 3e-04
Identities = 25/80 (31%), Positives = 44/80 (55%)
Frame = +3
Query: 252 LIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFAT 431
++AP G G + G ++ ++VGN +P+ +P T + N+E G G+L R++G+ AT
Sbjct: 130 VLAPHGSTPGDALESGPESDIKVGNALPLKNIPLQTTIHNIELVPGRGGQLCRSAGSAAT 189
Query: 432 VIGHNPDAKPSRVKLPVWSQ 491
++ D V+LP Q
Sbjct: 190 LVKKADDGGYCVVRLPSGEQ 209
>UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein L2 - Chlorokybus
atmophyticus (Soil alga)
Length = 368
Score = 46.8 bits (106), Expect = 5e-04
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +3
Query: 252 LIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFAT 431
++A L G FV G + GN +P+ ++P GT+V N+E G G++ RA+G A
Sbjct: 198 ILASHQLKAGDFVSSGPNVEIRTGNALPLISIPLGTLVHNIELYPGSGGQVVRAAGTSAQ 257
Query: 432 VI-GHNPDAKPSRVKLPVWSQEGLP 503
+I HN K + ++LP + P
Sbjct: 258 LIKKHN---KYAILRLPSGELKSFP 279
>UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellular
organisms|Rep: 50S ribosomal protein L2 - Methylococcus
capsulatus
Length = 281
Score = 46.4 bits (105), Expect = 6e-04
Identities = 22/74 (29%), Positives = 41/74 (55%)
Frame = +3
Query: 252 LIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFAT 431
++AP GL G + G+ A ++VGN +P+ +P GT+V +E K G + AR++G
Sbjct: 110 IVAPAGLSAGSEIVAGEFAAIKVGNSLPLRNIPVGTVVHCVEGKPGKGAQYARSAGTSIQ 169
Query: 432 VIGHNPDAKPSRVK 473
++ + R++
Sbjct: 170 LVAKEGEYATLRMR 183
>UniRef50_A3LNH9 Cluster: Predicted protein; n=5;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 364
Score = 45.2 bits (102), Expect = 0.001
Identities = 19/55 (34%), Positives = 35/55 (63%)
Frame = +3
Query: 312 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKPSRVKL 476
++ GN +P+ +P G+I+ N+ G RG+L +A+G FA ++ +P+ K +KL
Sbjct: 212 MQRGNCLPLHMLPVGSIIHNIGLHPGGRGQLVKAAGTFARLLSKHPEEKKVVIKL 266
>UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17;
Bacteria|Rep: 50S ribosomal protein L2 - Mycoplasma
pneumoniae
Length = 287
Score = 44.0 bits (99), Expect = 0.003
Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +3
Query: 252 LIAPEGLYTGQFVYCGKKAT-LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFA 428
+I+P+G+ G + + ++ G MP+ +PEGT V N+E G++AR++G++A
Sbjct: 109 IISPDGIKVGDKILASEHPIDIKPGFSMPLAFIPEGTQVHNIELHPKGGGQIARSAGSYA 168
Query: 429 TVIGHNPDAK 458
++G + K
Sbjct: 169 RILGQDETGK 178
>UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5;
Tracheophyta|Rep: Ribosomal protein L2 - Selaginella
uncinata (Blue spikemoss) (Peacock spikemoss)
Length = 282
Score = 43.6 bits (98), Expect = 0.004
Identities = 25/76 (32%), Positives = 37/76 (48%)
Frame = +3
Query: 243 EGALIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGN 422
+G + PEG+ G + G A VGN P MP GT++ +E G G+ ARA+G
Sbjct: 101 KGYISHPEGIRVGDAIPTGPGAPTTVGNAPPPTHMPLGTVMHGIEVAPGKGGQSARAAGA 160
Query: 423 FATVIGHNPDAKPSRV 470
A + + SR+
Sbjct: 161 PAKPVAKEGQSATSRL 176
>UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome.
precursor; n=9; Pezizomycotina|Rep: Contig An01c0260,
complete genome. precursor - Aspergillus niger
Length = 414
Score = 42.7 bits (96), Expect = 0.008
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +3
Query: 321 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 437
GN +P+ MP GT+V N+ + G G+L R++G FATVI
Sbjct: 213 GNCLPLHMMPVGTLVFNVGLRPGQGGQLCRSAGTFATVI 251
>UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6;
Eurotiomycetidae|Rep: 50S ribosomal protein L2 -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 404
Score = 42.7 bits (96), Expect = 0.008
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +3
Query: 321 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 458
GN +P+ +P GT++ N+ + G G+L R++G +ATVI D K
Sbjct: 212 GNCLPLHMIPVGTLIFNVGLRPGKGGQLCRSAGTYATVISKGSDTK 257
>UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;
n=2; Embryophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Marchantia polymorpha (Liverwort)
Length = 501
Score = 42.7 bits (96), Expect = 0.008
Identities = 23/64 (35%), Positives = 34/64 (53%)
Frame = +3
Query: 318 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKPSRVKLPVWSQEG 497
VGN +P+ +P GT V N+E G +L RA+G FA +I + V+LP +
Sbjct: 359 VGNCIPLAKIPIGTWVHNIERNPGQGAKLTRAAGTFAQIIQKVENTPQCIVRLPSGVDKL 418
Query: 498 LPSR 509
+ SR
Sbjct: 419 IDSR 422
>UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr12 scaffold_36, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 166
Score = 42.3 bits (95), Expect = 0.010
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = -2
Query: 398 TSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACVEPFGSNKSSFLVL 234
T +TH + +AHNGTL S R +I+N + L+ +++L V ++ FL+L
Sbjct: 19 TMVTHMVLNVAHNGTLGDGSKRQNIANNEIGLLAIVDELVGVHALDGDEQLFLML 73
>UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep:
Ribosomal protein L2 - Zea mays (Maize)
Length = 448
Score = 40.3 bits (90), Expect = 0.040
Identities = 23/65 (35%), Positives = 39/65 (60%)
Frame = +3
Query: 315 EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKPSRVKLPVWSQE 494
+VGN +P+ GT V N+E + G G++ RA+G +A V+ P AK ++LP +++
Sbjct: 295 KVGNCIPLANARIGTWVHNIECRPGQGGKMVRAAGTYAKVV-QEPGAK-CVLRLPSGAEK 352
Query: 495 GLPSR 509
+ SR
Sbjct: 353 AVDSR 357
>UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondrial
precursor; n=6; Ascomycota|Rep: 54S ribosomal protein
RML2, mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 393
Score = 39.1 bits (87), Expect = 0.093
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = +3
Query: 309 TLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKPSRVKL 476
T + GN +P+ +P GTI+ N+ G+ R++G +A V+ P+ K + V+L
Sbjct: 234 TTQRGNCLPISMIPIGTIIHNVGITPVGPGKFCRSAGTYARVLAKLPEKKKAIVRL 289
>UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;
n=1; Acanthamoeba castellanii|Rep: Mitochondrial 60S
ribosomal protein L2 - Acanthamoeba castellanii (Amoeba)
Length = 253
Score = 38.7 bits (86), Expect = 0.12
Identities = 18/62 (29%), Positives = 34/62 (54%)
Frame = +3
Query: 252 LIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFAT 431
++APEGL G ++ + L+ GN + +P G + ++E + RA+G++AT
Sbjct: 85 ILAPEGLLVGDCIFAKENIVLKPGNSTYLQHIPIGLKINSIELSENKGAQFIRAAGSYAT 144
Query: 432 VI 437
+I
Sbjct: 145 II 146
>UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular
organisms|Rep: Ribosomal protein L2 - Physcomitrella
patens (Moss)
Length = 463
Score = 38.3 bits (85), Expect = 0.16
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 6/103 (5%)
Frame = +3
Query: 219 RSIQVQDKEGALIAPEGLYTG-QFVYCGKKATLE-----VGNVMPVGAMPEGTIVCNLEE 380
RS++V++ A GL G + K L+ VGN + + +P GT V N+E
Sbjct: 282 RSLRVEEPTRRSQAASGLRPGGNYASSENKNILDSYYQMVGNCVSLANIPIGTWVHNIEW 341
Query: 381 KMGDRGRLARASGNFATVIGHNPDAKPSRVKLPVWSQEGLPSR 509
G +L RA+G FA +I + V+LP + + SR
Sbjct: 342 NPGQGAKLIRAAGTFAQIIKKFENTPQCIVRLPSGVDKLIDSR 384
>UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 169
Score = 37.9 bits (84), Expect = 0.21
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +3
Query: 318 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKPSRVKLP 479
+G+ MP+G M GTI+ N+E G ++ RA+G A ++ P +KLP
Sbjct: 14 IGSSMPLGMMRIGTIIHNIEMNPGQGAKMVRAAGTNAKIL-KEPAKGKCLIKLP 66
>UniRef50_Q5DC89 Cluster: SJCHGC02322 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02322 protein - Schistosoma
japonicum (Blood fluke)
Length = 393
Score = 37.9 bits (84), Expect = 0.21
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 321 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 437
G+ PVGA+P GT++ E K G R +G+ ATV+
Sbjct: 186 GDAYPVGALPVGTVISQFEIKPGQGALFCRTAGSSATVV 224
>UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2;
Filobasidiella neoformans|Rep: Ribosomal protein L2,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 481
Score = 37.9 bits (84), Expect = 0.21
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +3
Query: 300 KKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGH 443
+ TL+ GNV+P+ +P G V N+ + R +L R++G F V+ H
Sbjct: 290 RTVTLKPGNVLPLYLIPPGMQVHNISLTVDGRMQLCRSAGTFGQVVSH 337
>UniRef50_Q2HAK3 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 382
Score = 37.1 bits (82), Expect = 0.37
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +3
Query: 321 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKPSRVKL 476
GN +P+ +P GT+V N+ +M R++G +AT+I + + K+
Sbjct: 154 GNCLPMHMIPVGTVVYNVGSRMDGGAVFCRSAGTYATIISKEEETRDDGTKV 205
>UniRef50_Q8A920 Cluster: Putative uncharacterized protein; n=4;
Bacteroidetes|Rep: Putative uncharacterized protein -
Bacteroides thetaiotaomicron
Length = 873
Score = 36.7 bits (81), Expect = 0.49
Identities = 27/69 (39%), Positives = 32/69 (46%)
Frame = +1
Query: 73 FVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKEL 252
F KK APKL A +G + V+ + IH G PLA VH Y F K
Sbjct: 782 FKDDQKKYAKAPKLEIDASANDYGQAEPVLTNAIHI--NGMPLANVH---AYSFPAGKHT 836
Query: 253 LLLPKGSTQ 279
L+LPKG Q
Sbjct: 837 LMLPKGYLQ 845
>UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep:
Ribosomal protein L2 - Carsonella ruddii
Length = 235
Score = 36.3 bits (80), Expect = 0.65
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +1
Query: 55 KGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYK 231
+ G + V H K K R +D+ IKG+V+ I +DP R A +A++ + D K
Sbjct: 18 RSRGKISVRHIGK-KHKKFYRKIDFKRDKSNIKGIVESIHYDPNRNARIALIKYLDGEK 75
>UniRef50_A6ECP8 Cluster: Ferrichrome-iron receptor; n=1; Pedobacter
sp. BAL39|Rep: Ferrichrome-iron receptor - Pedobacter sp.
BAL39
Length = 904
Score = 35.9 bits (79), Expect = 0.86
Identities = 24/74 (32%), Positives = 33/74 (44%)
Frame = -2
Query: 545 RPPPATIPTMLCS*WQTFLAPDG*LYS*RLSIRIVSNHSGEVSRGTCQTTSITHFLFKIA 366
R P + P L + W +++ PDG L L +NHSG+ G TT + F
Sbjct: 798 RRPASAGPDELINIWVSYVQPDGSLKG--LGAGFGANHSGKYLSGNSATTGVFTFPSYTL 855
Query: 365 HNGTLRHSSNRHHI 324
NGTL + R I
Sbjct: 856 LNGTLFYEMRRCRI 869
>UniRef50_Q5IX18 Cluster: 50S ribosomal protein L2; n=1; Prototheca
wickerhamii|Rep: 50S ribosomal protein L2 - Prototheca
wickerhamii
Length = 218
Score = 35.5 bits (78), Expect = 1.1
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +3
Query: 252 LIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMG 389
++AP G+ G V CG A + G+ +P+ A+P G + N+E + G
Sbjct: 171 VLAPAGVGPGDRVMCGATAPIVPGSSLPLSAIPVGMPIHNVELRPG 216
>UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-PA -
Drosophila pseudoobscura (Fruit fly)
Length = 297
Score = 35.5 bits (78), Expect = 1.1
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3
Query: 321 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 437
G+ P+GA+P GT + LE+ G + L A+G F T++
Sbjct: 164 GDAYPLGALPVGTRIHCLEKNPGQQCHLIHAAGTFGTIL 202
>UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10;
Magnoliophyta|Rep: 50S ribosomal protein L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 144
Score = 35.1 bits (77), Expect = 1.5
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +3
Query: 345 MPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKPSRVKLP 479
MP GT + N+E +G G+LARA+G A +I + K + +KLP
Sbjct: 3 MPLGTAIHNIEITLGRGGQLARAAGAVAKLIA--KEGKSATLKLP 45
>UniRef50_A5DY19 Cluster: 60S ribosomal protein RML2, mitochondrial;
n=2; Saccharomycetales|Rep: 60S ribosomal protein RML2,
mitochondrial - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 376
Score = 35.1 bits (77), Expect = 1.5
Identities = 16/55 (29%), Positives = 32/55 (58%)
Frame = +3
Query: 312 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKPSRVKL 476
L+ GN +P+ +P G+I+ + R +L RA+G F ++G + + + + +KL
Sbjct: 220 LQRGNCLPLRMIPVGSIIHCIGLNSQRRSQLVRAAGTFGKILGKDQERQLAIIKL 274
>UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;
n=24; Spermatophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Oryza sativa subsp. japonica (Rice)
Length = 502
Score = 35.1 bits (77), Expect = 1.5
Identities = 22/65 (33%), Positives = 36/65 (55%)
Frame = +3
Query: 315 EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKPSRVKLPVWSQE 494
+VGN +P+ + GT V ++E G +LARA+G +A +I A V+LP ++
Sbjct: 359 KVGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKII--KEPASQCLVRLPSGVEK 416
Query: 495 GLPSR 509
+ SR
Sbjct: 417 LIDSR 421
>UniRef50_Q4S2E6 Cluster: Chromosome 17 SCAF14762, whole genome
shotgun sequence; n=2; Eumetazoa|Rep: Chromosome 17
SCAF14762, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 259
Score = 34.7 bits (76), Expect = 2.0
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +3
Query: 252 LIAPEGLYTGQFV----YCGKKA-TLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARAS 416
+IA E + G + G+ A + G+ P+GA+P GT+V NLE + G RA+
Sbjct: 136 IIATENMQAGDVIKTSAVIGRMAVSANEGDAYPLGALPVGTLVNNLEIQPGKGSEYIRAA 195
Query: 417 GNFATVI 437
G ++
Sbjct: 196 GTSGVLL 202
>UniRef50_Q8MYY5 Cluster: RE45450p; n=6; Endopterygota|Rep: RE45450p
- Drosophila melanogaster (Fruit fly)
Length = 294
Score = 34.7 bits (76), Expect = 2.0
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 321 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 437
G+ P+GA+P GT + LE+ G L A+G F T++
Sbjct: 161 GDAYPLGALPVGTRIHCLEKNPGQMCHLIHAAGTFGTIL 199
>UniRef50_O45110 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 321
Score = 34.3 bits (75), Expect = 2.6
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +3
Query: 321 GNVMPVGAMPEGTIVCNLEE-KMGDRGRLARASGNFATVIGHNPDAKPSRVKLP 479
GN P+G++ GT++ ++E D +A+G AT++ H D + VKLP
Sbjct: 160 GNAYPIGSLAAGTVINSIERYPTMDSETFVKAAGTSATIVRHQGDF--TVVKLP 211
>UniRef50_Q5T653 Cluster: 39S ribosomal protein L2, mitochondrial
precursor; n=24; Euteleostomi|Rep: 39S ribosomal protein
L2, mitochondrial precursor - Homo sapiens (Human)
Length = 305
Score = 34.3 bits (75), Expect = 2.6
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Frame = +3
Query: 252 LIAPEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARAS 416
+IA E + G + + G+ A G+ P+GA+P GT++ N+E + G + RA+
Sbjct: 151 IIATENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAA 210
Query: 417 GNFATVI 437
G ++
Sbjct: 211 GTCGVLL 217
>UniRef50_UPI00003617AD Cluster: 39S ribosomal protein L2,
mitochondrial precursor (L2mt) (MRP-L2).; n=2;
Deuterostomia|Rep: 39S ribosomal protein L2,
mitochondrial precursor (L2mt) (MRP-L2). - Takifugu
rubripes
Length = 255
Score = 33.9 bits (74), Expect = 3.5
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 321 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 437
G+ P+GA+P GT+V NLE + G RA+G ++
Sbjct: 130 GDAYPLGALPVGTLVNNLEIQPGKGSEYIRAAGTSGVLL 168
>UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2;
Streptophytina|Rep: Ribosomal protein L2 - Chara
vulgaris (Common stonewort)
Length = 262
Score = 33.9 bits (74), Expect = 3.5
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 318 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 437
+GN + + +P GT++ N+E G + RA+G FA +I
Sbjct: 122 LGNCVQLAYIPVGTLIHNIEWNPGQGAKFVRAAGTFAQLI 161
>UniRef50_A1G8A1 Cluster: Major facilitator superfamily MFS_1; n=5;
Salinispora|Rep: Major facilitator superfamily MFS_1 -
Salinispora arenicola CNS205
Length = 505
Score = 33.5 bits (73), Expect = 4.6
Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 2/108 (1%)
Frame = -3
Query: 625 GTP-RHMPQYVXLVLVEXLPAFKIGLQYVHLQQQYRPCSVLDGRPSWLQTGSFTLDGLAS 449
G P R P V V V L I + + ++ DG WL +G F L
Sbjct: 32 GRPVRRWPVVVVSVFVAFLAGLNISAVIIAVPLIDEVFALTDGDQQWLVSGYF----LTF 87
Query: 448 GLCPITVAKFPEARARRPLSPIFSSR-LHTMVPSGIAPTGITFPTSRV 308
GL + ++ + R RR + +S + + V +G+APTG +R+
Sbjct: 88 GLALVPAGRYGDVRGRRNIFVAGASLFVVSSVVAGLAPTGAVLIIARL 135
>UniRef50_A7QZU6 Cluster: Chromosome undetermined scaffold_288,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_288, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 315
Score = 33.1 bits (72), Expect = 6.1
Identities = 20/77 (25%), Positives = 37/77 (48%)
Frame = -2
Query: 503 WQTFLAPDG*LYS*RLSIRIVSNHSGEVSRGTCQTTSITHFLFKIAHNGTLRHSSNRHHI 324
W L+P L IR+V++ + ++ + TSIT+ +F + GT + ++
Sbjct: 75 WNNLLSPRWELDPAGAIIRVVADDNSSLAGCPGEDTSITNVIFNVTDLGTFGSRAQGQNV 134
Query: 323 SNFKSCFLSTINKLACV 273
+ FL+ N+LA V
Sbjct: 135 IGNEGGFLTAANELARV 151
>UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria
tenella|Rep: Ribosomal protein L2 - Eimeria tenella
Length = 273
Score = 33.1 bits (72), Expect = 6.1
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +3
Query: 279 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 377
G +Y G+ L++GN++P+ +P G+ + N+E
Sbjct: 109 GDIIYIGETIELKIGNILPIKKIPCGSWIHNIE 141
>UniRef50_A3LYD9 Cluster: Hypothetical transcription factor; n=1;
Pichia stipitis|Rep: Hypothetical transcription factor -
Pichia stipitis (Yeast)
Length = 756
Score = 33.1 bits (72), Expect = 6.1
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = -2
Query: 425 EVSRGTCQTTSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACVEPFGSNKSS 246
E S T S+ H L K + SSN +H+S KS F + +N V G N S+
Sbjct: 453 ENSHSTKNAHSVDHSLVKNRELDQVSSSSNSNHLSLKKSAFSNWLNNPNQVHTVGGNPSA 512
Query: 245 FLV 237
L+
Sbjct: 513 NLI 515
>UniRef50_A1G6E0 Cluster: NAD/FAD-dependent oxidoreductase-like;
n=2; Salinispora|Rep: NAD/FAD-dependent
oxidoreductase-like - Salinispora arenicola CNS205
Length = 313
Score = 32.7 bits (71), Expect = 8.0
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Frame = +3
Query: 348 PEGTIVCNLEEKMGDRGRL--ARASGNFATVIGHNPDAKPSRVKLPVWSQEGLPSRTEHG 521
P +VC+ ++ GD + A + +FA H PDA + V LP E
Sbjct: 196 PVLALVCDDGDRRGDGAPVLVAHTTPDFAAEYLHRPDAAAPAIAHAVRELLVLPEPAEE- 254
Query: 522 RYCCWRWTYCKPILK 566
C RW Y KP ++
Sbjct: 255 -VCVHRWAYAKPTVE 268
>UniRef50_Q2LCR9 Cluster: Ribosomal protein L2; n=3;
Dictyosteliida|Rep: Ribosomal protein L2 - Dictyostelium
citrinum
Length = 266
Score = 32.7 bits (71), Expect = 8.0
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = +3
Query: 300 KKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKPSRVKL 476
K+ L+VG + +PEG ++ N+E +L+RA+G + +I + K S VKL
Sbjct: 102 KQGILQVGYTTKIKNIPEGILINNIELMENSGSKLSRAAGTSSLII-KQYNKKYSLVKL 159
>UniRef50_Q6CGS9 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 210
Score = 32.7 bits (71), Expect = 8.0
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +2
Query: 185 VEVHLWLLYTSAIHTSSRQGRSSYCSRRALHRPICLLWKES-NS*SWKC-DACWSY 346
+ VH W+L + ++ +SS+ + +++ RP C + + NS WK ACW +
Sbjct: 134 IPVHAWILASRWHFFKAKLAKSSWTAPKSVSRPWCRTFMAAENSWIWKLPSACWGW 189
>UniRef50_Q9UHJ6 Cluster: Carbohydrate kinase-like protein; n=18;
Euteleostomi|Rep: Carbohydrate kinase-like protein -
Homo sapiens (Human)
Length = 478
Score = 32.7 bits (71), Expect = 8.0
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 2/85 (2%)
Frame = -3
Query: 544 VHLQQQYRPCSVLDGRPS--WLQTGSFTLDGLASGLCPITVAKFPEARARRPLSPIFSSR 371
VHL + GR S W + T G+A G +V R L+ S +
Sbjct: 224 VHLLPDIAEPGSVAGRTSHMWFEIPKGTQVGVALGDLQASVYSCMAQRTDAVLNISTSVQ 283
Query: 370 LHTMVPSGIAPTGITFPTSRVAFFP 296
L +PSG P PT+ VA+FP
Sbjct: 284 LAASMPSGFQPAQTPDPTAPVAYFP 308
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 690,767,446
Number of Sequences: 1657284
Number of extensions: 14984815
Number of successful extensions: 39570
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 38202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39557
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50000004659
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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