Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0230
         (660 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein ...   140   5e-35
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    25   2.8  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    25   2.8  
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    24   3.7  
DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor...    24   4.9  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          23   6.5  
AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transpor...    23   8.5  

>AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein L8
           protein.
          Length = 261

 Score =  140 bits (338), Expect = 5e-35
 Identities = 69/109 (63%), Positives = 83/109 (76%), Gaps = 2/109 (1%)
 Frame = +3

Query: 255 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATV 434
           IA EG+YTGQFVYCG++A L++GNV+P+G MPEGTIVCNLEEK GDRG+LAR SGN+A+V
Sbjct: 77  IAAEGMYTGQFVYCGRRAQLQIGNVIPIGLMPEGTIVCNLEEKTGDRGKLARTSGNYASV 136

Query: 435 IGHNPDAKPSRVKLPVWSQEGLPS--RTEHGRYCCWRWTYCKPILKAGR 575
           I HNPD K +RVKLP  +++ LPS  R   G          KPILKAGR
Sbjct: 137 IAHNPDTKRTRVKLPSGAKKVLPSANRAMVG-IVAGGGRIDKPILKAGR 184



 Score =  134 bits (325), Expect = 2e-33
 Identities = 80/170 (47%), Positives = 100/170 (58%), Gaps = 2/170 (1%)
 Frame = +1

Query: 46  AQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDP 225
           AQRKGAGSVF +HTKKRKG PKLR LDYAERHGY+KGVVK II DPGRGAPLAVV+FRDP
Sbjct: 7   AQRKGAGSVFRAHTKKRKGQPKLRHLDYAERHGYLKGVVKQIIQDPGRGAPLAVVNFRDP 66

Query: 226 YKFKTRKELLLLPKGS-TQANLFIVERKQXXXXXXXXXXXXXXRVPLCAILKRKWVIEVV 402
           Y+F+  K+L +  +G  T   ++   R Q                 +C + ++      +
Sbjct: 67  YRFRLSKQLFIAAEGMYTGQFVYCGRRAQLQIGNVIPIGLMPEGTIVCNLEEKTGDRGKL 126

Query: 403 WHVPLETSPL*LDTILMLSRQE*SYPSGAKKVC-HQEQSMVGIVAGGGRI 549
                  + + +       R     PSGAKKV     ++MVGIVAGGGRI
Sbjct: 127 ARTSGNYASV-IAHNPDTKRTRVKLPSGAKKVLPSANRAMVGIVAGGGRI 175


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +1

Query: 136 RHGYIKGVVKDIIHDP 183
           R+  +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +1

Query: 136 RHGYIKGVVKDIIHDP 183
           R+  +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +3

Query: 513 EHGRYCCWRWTYC 551
           +HG++CC R ++C
Sbjct: 283 QHGQHCCCRGSHC 295


>DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor 24
           protein.
          Length = 378

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -2

Query: 407 CQTTSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLA 279
           C+T SIT  +        LRH      +S ++S +L  ++KLA
Sbjct: 180 CETLSITAKILAEDFQRALRHVGPAAKVSEYRSLWL-RLSKLA 221


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -2

Query: 581 GXPSSFQNRFAIRPPPATIP 522
           G P S    FA+ PPPA  P
Sbjct: 481 GTPRSTPVPFALAPPPAASP 500


>AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transporter
           protein.
          Length = 570

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -3

Query: 517 CSVLDGRPSWLQTGSFTLDGLASGLCPITV 428
           C  L   P  +QTG+ T+D   S L  +T+
Sbjct: 460 CLWLQEHPGAIQTGNQTVDSTLSVLLGMTI 489


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 733,516
Number of Sequences: 2352
Number of extensions: 16107
Number of successful extensions: 35
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)