Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0230
(660 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8 pr... 136 7e-32
BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8 pr... 136 7e-32
BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8 pr... 136 7e-32
Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8 prot... 136 9e-32
CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein. 136 9e-32
BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8 pr... 136 9e-32
BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8 pr... 136 9e-32
BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein. 136 9e-32
AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8 pr... 136 9e-32
AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8 pr... 121 3e-27
AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein. 36 0.097
BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal... 34 0.39
BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal... 34 0.39
AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA seq... 34 0.39
BC020543-1|AAH20543.1| 478|Homo sapiens carbohydrate kinase-lik... 33 1.2
AF168787-1|AAF43103.1| 478|Homo sapiens CARKL protein. 33 1.2
AF163573-1|AAF24936.1| 478|Homo sapiens CARKL protein. 33 1.2
BC071733-1|AAH71733.1| 457|Homo sapiens retinoic acid receptor,... 30 6.4
BC022782-1|AAH22782.1| 780|Homo sapiens bromo adjacent homology... 30 6.4
AF283809-1|AAF87249.1| 54|Homo sapiens retinoic acid receptor ... 30 6.4
AB023162-1|BAA76789.2| 797|Homo sapiens KIAA0945 protein protein. 30 6.4
>BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 136 bits (329), Expect = 7e-32
Identities = 71/109 (65%), Positives = 81/109 (74%), Gaps = 2/109 (1%)
Frame = +3
Query: 255 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATV 434
IA EG++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATV
Sbjct: 77 IAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATV 136
Query: 435 IGHNPDAKPSRVKLPVWSQEGLPS--RTEHGRYCCWRWTYCKPILKAGR 575
I HNP+ K +RVKLP S++ + S R G KPILKAGR
Sbjct: 137 ISHNPETKKTRVKLPSGSKKVISSANRAVVG-VVAGGGRIDKPILKAGR 184
Score = 126 bits (303), Expect = 9e-29
Identities = 72/169 (42%), Positives = 99/169 (58%), Gaps = 2/169 (1%)
Frame = +1
Query: 49 QRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPY 228
QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY
Sbjct: 8 QRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPY 67
Query: 229 KFKTRKELLLLPKG-STQANLFIVERKQXXXXXXXXXXXXXXRVPLCAILKRKWVIEVVW 405
+FK R EL + +G T ++ ++ Q +C + ++ +
Sbjct: 68 RFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLA 127
Query: 406 HVPLETSPL*LDTILMLSRQE*SYPSGAKKVCHQ-EQSMVGIVAGGGRI 549
+ + + + PSG+KKV +++VG+VAGGGRI
Sbjct: 128 RASGNYATV-ISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRI 175
>BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 136 bits (329), Expect = 7e-32
Identities = 71/109 (65%), Positives = 81/109 (74%), Gaps = 2/109 (1%)
Frame = +3
Query: 255 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATV 434
IA EG++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATV
Sbjct: 77 IAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATV 136
Query: 435 IGHNPDAKPSRVKLPVWSQEGLPS--RTEHGRYCCWRWTYCKPILKAGR 575
I HNP+ K +RVKLP S++ + S R G KPILKAGR
Sbjct: 137 ISHNPETKKTRVKLPSGSKKVISSANRAVVG-VVAGGGRIDKPILKAGR 184
Score = 126 bits (303), Expect = 9e-29
Identities = 72/169 (42%), Positives = 99/169 (58%), Gaps = 2/169 (1%)
Frame = +1
Query: 49 QRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPY 228
QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY
Sbjct: 8 QRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPY 67
Query: 229 KFKTRKELLLLPKG-STQANLFIVERKQXXXXXXXXXXXXXXRVPLCAILKRKWVIEVVW 405
+FK R EL + +G T ++ ++ Q +C + ++ +
Sbjct: 68 RFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLA 127
Query: 406 HVPLETSPL*LDTILMLSRQE*SYPSGAKKVCHQ-EQSMVGIVAGGGRI 549
+ + + + PSG+KKV +++VG+VAGGGRI
Sbjct: 128 RASGNYATV-ISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRI 175
>BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 136 bits (329), Expect = 7e-32
Identities = 71/109 (65%), Positives = 81/109 (74%), Gaps = 2/109 (1%)
Frame = +3
Query: 255 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATV 434
IA EG++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATV
Sbjct: 77 IAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATV 136
Query: 435 IGHNPDAKPSRVKLPVWSQEGLPS--RTEHGRYCCWRWTYCKPILKAGR 575
I HNP+ K +RVKLP S++ + S R G KPILKAGR
Sbjct: 137 ISHNPETKKTRVKLPSGSKKVISSANRAVVG-VVAGGGRIDKPILKAGR 184
Score = 126 bits (303), Expect = 9e-29
Identities = 72/169 (42%), Positives = 99/169 (58%), Gaps = 2/169 (1%)
Frame = +1
Query: 49 QRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPY 228
QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY
Sbjct: 8 QRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPY 67
Query: 229 KFKTRKELLLLPKG-STQANLFIVERKQXXXXXXXXXXXXXXRVPLCAILKRKWVIEVVW 405
+FK R EL + +G T ++ ++ Q +C + ++ +
Sbjct: 68 RFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLA 127
Query: 406 HVPLETSPL*LDTILMLSRQE*SYPSGAKKVCHQ-EQSMVGIVAGGGRI 549
+ + + + PSG+KKV +++VG+VAGGGRI
Sbjct: 128 RASGNYATV-ISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRI 175
>Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 136 bits (328), Expect = 9e-32
Identities = 70/109 (64%), Positives = 81/109 (74%), Gaps = 2/109 (1%)
Frame = +3
Query: 255 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATV 434
IA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATV
Sbjct: 77 IAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATV 136
Query: 435 IGHNPDAKPSRVKLPVWSQEGLPS--RTEHGRYCCWRWTYCKPILKAGR 575
I HNP+ K +RVKLP S++ + S R G KPILKAGR
Sbjct: 137 ISHNPETKKTRVKLPSGSKKVISSANRAVVG-VVAGGGRIDKPILKAGR 184
Score = 126 bits (303), Expect = 9e-29
Identities = 72/169 (42%), Positives = 99/169 (58%), Gaps = 2/169 (1%)
Frame = +1
Query: 49 QRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPY 228
QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY
Sbjct: 8 QRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPY 67
Query: 229 KFKTRKELLLLPKG-STQANLFIVERKQXXXXXXXXXXXXXXRVPLCAILKRKWVIEVVW 405
+FK R EL + +G T ++ ++ Q +C + ++ +
Sbjct: 68 RFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLA 127
Query: 406 HVPLETSPL*LDTILMLSRQE*SYPSGAKKVCHQ-EQSMVGIVAGGGRI 549
+ + + + PSG+KKV +++VG+VAGGGRI
Sbjct: 128 RASGNYATV-ISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRI 175
>CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein.
Length = 257
Score = 136 bits (328), Expect = 9e-32
Identities = 70/109 (64%), Positives = 81/109 (74%), Gaps = 2/109 (1%)
Frame = +3
Query: 255 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATV 434
IA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATV
Sbjct: 77 IAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATV 136
Query: 435 IGHNPDAKPSRVKLPVWSQEGLPS--RTEHGRYCCWRWTYCKPILKAGR 575
I HNP+ K +RVKLP S++ + S R G KPILKAGR
Sbjct: 137 ISHNPETKKTRVKLPSGSKKVISSANRAVVG-VVAGGGRIDKPILKAGR 184
Score = 126 bits (303), Expect = 9e-29
Identities = 72/169 (42%), Positives = 99/169 (58%), Gaps = 2/169 (1%)
Frame = +1
Query: 49 QRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPY 228
QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY
Sbjct: 8 QRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPY 67
Query: 229 KFKTRKELLLLPKG-STQANLFIVERKQXXXXXXXXXXXXXXRVPLCAILKRKWVIEVVW 405
+FK R EL + +G T ++ ++ Q +C + ++ +
Sbjct: 68 RFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLA 127
Query: 406 HVPLETSPL*LDTILMLSRQE*SYPSGAKKVCHQ-EQSMVGIVAGGGRI 549
+ + + + PSG+KKV +++VG+VAGGGRI
Sbjct: 128 RASGNYATV-ISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRI 175
>BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 136 bits (328), Expect = 9e-32
Identities = 70/109 (64%), Positives = 81/109 (74%), Gaps = 2/109 (1%)
Frame = +3
Query: 255 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATV 434
IA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATV
Sbjct: 77 IAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATV 136
Query: 435 IGHNPDAKPSRVKLPVWSQEGLPS--RTEHGRYCCWRWTYCKPILKAGR 575
I HNP+ K +RVKLP S++ + S R G KPILKAGR
Sbjct: 137 ISHNPETKKTRVKLPSGSKKVISSANRAVVG-VVAGGGRIDKPILKAGR 184
Score = 126 bits (303), Expect = 9e-29
Identities = 72/169 (42%), Positives = 99/169 (58%), Gaps = 2/169 (1%)
Frame = +1
Query: 49 QRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPY 228
QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY
Sbjct: 8 QRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPY 67
Query: 229 KFKTRKELLLLPKG-STQANLFIVERKQXXXXXXXXXXXXXXRVPLCAILKRKWVIEVVW 405
+FK R EL + +G T ++ ++ Q +C + ++ +
Sbjct: 68 RFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLA 127
Query: 406 HVPLETSPL*LDTILMLSRQE*SYPSGAKKVCHQ-EQSMVGIVAGGGRI 549
+ + + + PSG+KKV +++VG+VAGGGRI
Sbjct: 128 RASGNYATV-ISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRI 175
>BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 136 bits (328), Expect = 9e-32
Identities = 70/109 (64%), Positives = 81/109 (74%), Gaps = 2/109 (1%)
Frame = +3
Query: 255 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATV 434
IA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATV
Sbjct: 77 IAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATV 136
Query: 435 IGHNPDAKPSRVKLPVWSQEGLPS--RTEHGRYCCWRWTYCKPILKAGR 575
I HNP+ K +RVKLP S++ + S R G KPILKAGR
Sbjct: 137 ISHNPETKKTRVKLPSGSKKVISSANRAVVG-VVAGGGRIDKPILKAGR 184
Score = 126 bits (303), Expect = 9e-29
Identities = 72/169 (42%), Positives = 99/169 (58%), Gaps = 2/169 (1%)
Frame = +1
Query: 49 QRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPY 228
QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY
Sbjct: 8 QRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPY 67
Query: 229 KFKTRKELLLLPKG-STQANLFIVERKQXXXXXXXXXXXXXXRVPLCAILKRKWVIEVVW 405
+FK R EL + +G T ++ ++ Q +C + ++ +
Sbjct: 68 RFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLA 127
Query: 406 HVPLETSPL*LDTILMLSRQE*SYPSGAKKVCHQ-EQSMVGIVAGGGRI 549
+ + + + PSG+KKV +++VG+VAGGGRI
Sbjct: 128 RASGNYATV-ISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRI 175
>BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein.
Length = 211
Score = 136 bits (328), Expect = 9e-32
Identities = 70/109 (64%), Positives = 81/109 (74%), Gaps = 2/109 (1%)
Frame = +3
Query: 255 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATV 434
IA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATV
Sbjct: 31 IAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATV 90
Query: 435 IGHNPDAKPSRVKLPVWSQEGLPS--RTEHGRYCCWRWTYCKPILKAGR 575
I HNP+ K +RVKLP S++ + S R G KPILKAGR
Sbjct: 91 ISHNPETKKTRVKLPSGSKKVISSANRAVVG-VVAGGGRIDKPILKAGR 138
Score = 62.5 bits (145), Expect = 1e-09
Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 2/130 (1%)
Frame = +1
Query: 166 DIIHDPGRGAPLAVVHFRDPYKFKTRKELLLLPKG-STQANLFIVERKQXXXXXXXXXXX 342
DIIHDPGRGAPLA V FRDPY+FK R EL + +G T ++ ++ Q
Sbjct: 1 DIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGT 60
Query: 343 XXXRVPLCAILKRKWVIEVVWHVPLETSPL*LDTILMLSRQE*SYPSGAKKVCHQ-EQSM 519
+C + ++ + + + + + PSG+KKV +++
Sbjct: 61 MPEGTIVCCLEEKPGDRGKLARASGNYATV-ISHNPETKKTRVKLPSGSKKVISSANRAV 119
Query: 520 VGIVAGGGRI 549
VG+VAGGGRI
Sbjct: 120 VGVVAGGGRI 129
>AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 136 bits (328), Expect = 9e-32
Identities = 70/109 (64%), Positives = 81/109 (74%), Gaps = 2/109 (1%)
Frame = +3
Query: 255 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATV 434
IA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATV
Sbjct: 77 IAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATV 136
Query: 435 IGHNPDAKPSRVKLPVWSQEGLPS--RTEHGRYCCWRWTYCKPILKAGR 575
I HNP+ K +RVKLP S++ + S R G KPILKAGR
Sbjct: 137 ISHNPETKKTRVKLPSGSKKVISSANRAVVG-VVAGGGRIDKPILKAGR 184
Score = 126 bits (303), Expect = 9e-29
Identities = 72/169 (42%), Positives = 99/169 (58%), Gaps = 2/169 (1%)
Frame = +1
Query: 49 QRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPY 228
QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY
Sbjct: 8 QRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPY 67
Query: 229 KFKTRKELLLLPKG-STQANLFIVERKQXXXXXXXXXXXXXXRVPLCAILKRKWVIEVVW 405
+FK R EL + +G T ++ ++ Q +C + ++ +
Sbjct: 68 RFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLA 127
Query: 406 HVPLETSPL*LDTILMLSRQE*SYPSGAKKVCHQ-EQSMVGIVAGGGRI 549
+ + + + PSG+KKV +++VG+VAGGGRI
Sbjct: 128 RASGNYATV-ISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRI 175
>AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8
protein.
Length = 130
Score = 121 bits (291), Expect = 3e-27
Identities = 54/74 (72%), Positives = 63/74 (85%)
Frame = +1
Query: 49 QRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPY 228
QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY
Sbjct: 4 QRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPY 63
Query: 229 KFKTRKELLLLPKG 270
+FK R EL + +G
Sbjct: 64 RFKKRTELFIAAEG 77
Score = 104 bits (249), Expect = 3e-22
Identities = 46/58 (79%), Positives = 52/58 (89%)
Frame = +3
Query: 255 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFA 428
IA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+A
Sbjct: 73 IAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYA 130
>AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein.
Length = 353
Score = 36.3 bits (80), Expect = 0.097
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Frame = +3
Query: 252 LIAPEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARAS 416
+IA E + G + + G+ A G+ P+GA+P GT++ N+E + G + RA+
Sbjct: 151 IIATENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAA 210
Query: 417 GNFATVI----GHNPDAKPSRVKLPV 482
G ++ GH+ PS+ ++ V
Sbjct: 211 GTCGVLLRKVNGHSIIQLPSKRQMQV 236
>BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 34.3 bits (75), Expect = 0.39
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Frame = +3
Query: 252 LIAPEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARAS 416
+IA E + G + + G+ A G+ P+GA+P GT++ N+E + G + RA+
Sbjct: 151 IIATENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAA 210
Query: 417 GNFATVI 437
G ++
Sbjct: 211 GTCGVLL 217
>BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 34.3 bits (75), Expect = 0.39
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Frame = +3
Query: 252 LIAPEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARAS 416
+IA E + G + + G+ A G+ P+GA+P GT++ N+E + G + RA+
Sbjct: 151 IIATENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAA 210
Query: 417 GNFATVI 437
G ++
Sbjct: 211 GTCGVLL 217
>AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA
sequence from clone RP11-387M24 on chromosome 6 Contains
the 5' end of a gene for a novel protein (KIAA0076
KIAA0708), the ).
Length = 302
Score = 34.3 bits (75), Expect = 0.39
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Frame = +3
Query: 252 LIAPEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARAS 416
+IA E + G + + G+ A G+ P+GA+P GT++ N+E + G + RA+
Sbjct: 148 IIATENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAA 207
Query: 417 GNFATVI 437
G ++
Sbjct: 208 GTCGVLL 214
>BC020543-1|AAH20543.1| 478|Homo sapiens carbohydrate kinase-like
protein.
Length = 478
Score = 32.7 bits (71), Expect = 1.2
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 2/85 (2%)
Frame = -3
Query: 544 VHLQQQYRPCSVLDGRPS--WLQTGSFTLDGLASGLCPITVAKFPEARARRPLSPIFSSR 371
VHL + GR S W + T G+A G +V R L+ S +
Sbjct: 224 VHLLPDIAEPGSVAGRTSHMWFEIPKGTQVGVALGDLQASVYSCMAQRTDAVLNISTSVQ 283
Query: 370 LHTMVPSGIAPTGITFPTSRVAFFP 296
L +PSG P PT+ VA+FP
Sbjct: 284 LAASMPSGFQPAQTPDPTAPVAYFP 308
>AF168787-1|AAF43103.1| 478|Homo sapiens CARKL protein.
Length = 478
Score = 32.7 bits (71), Expect = 1.2
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 2/85 (2%)
Frame = -3
Query: 544 VHLQQQYRPCSVLDGRPS--WLQTGSFTLDGLASGLCPITVAKFPEARARRPLSPIFSSR 371
VHL + GR S W + T G+A G +V R L+ S +
Sbjct: 224 VHLLPDIAEPGSVAGRTSHMWFEIPKGTQVGVALGDLQASVYSCMAQRTDAVLNISTSVQ 283
Query: 370 LHTMVPSGIAPTGITFPTSRVAFFP 296
L +PSG P PT+ VA+FP
Sbjct: 284 LAASMPSGFQPAQTPDPTAPVAYFP 308
>AF163573-1|AAF24936.1| 478|Homo sapiens CARKL protein.
Length = 478
Score = 32.7 bits (71), Expect = 1.2
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 2/85 (2%)
Frame = -3
Query: 544 VHLQQQYRPCSVLDGRPS--WLQTGSFTLDGLASGLCPITVAKFPEARARRPLSPIFSSR 371
VHL + GR S W + T G+A G +V R L+ S +
Sbjct: 224 VHLLPDIAEPGSVAGRTSHMWFEIPKGTQVGVALGDLQASVYSCMAQRTDAVLNISTSVQ 283
Query: 370 LHTMVPSGIAPTGITFPTSRVAFFP 296
L +PSG P PT+ VA+FP
Sbjct: 284 LAASMPSGFQPAQTPDPTAPVAYFP 308
>BC071733-1|AAH71733.1| 457|Homo sapiens retinoic acid receptor,
alpha protein.
Length = 457
Score = 30.3 bits (65), Expect = 6.4
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -2
Query: 275 VEPFGSNKSSFLVLNLYG-SRKCTTA-KGAPLPGSWIISLTTPL 150
VE G + FLV++ Y +R C KG P PG + L TPL
Sbjct: 5 VEVGGPTPNPFLVVDFYNQNRACLLPEKGLPAPGPYSTPLRTPL 48
>BC022782-1|AAH22782.1| 780|Homo sapiens bromo adjacent homology
domain containing 1 protein.
Length = 780
Score = 30.3 bits (65), Expect = 6.4
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +3
Query: 213 LPRSIQVQDKEGALIAPEGLYTGQF-VYCGKKATLEVGNVMPVGAMPEGTI 362
LP D G + PE G F +YCG++ L+ G P +PEG +
Sbjct: 355 LPMPGNPADYNGLCVGPELTALGSFYLYCGQEG-LQCGGYSPCPMLPEGKL 404
>AF283809-1|AAF87249.1| 54|Homo sapiens retinoic acid receptor
alpha 2 isoform protein.
Length = 54
Score = 30.3 bits (65), Expect = 6.4
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -2
Query: 275 VEPFGSNKSSFLVLNLYG-SRKCTTA-KGAPLPGSWIISLTTPL 150
VE G + FLV++ Y +R C KG P PG + L TPL
Sbjct: 5 VEVGGPTPNPFLVVDFYNQNRACLLPEKGLPAPGPYSTPLRTPL 48
>AB023162-1|BAA76789.2| 797|Homo sapiens KIAA0945 protein protein.
Length = 797
Score = 30.3 bits (65), Expect = 6.4
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +3
Query: 213 LPRSIQVQDKEGALIAPEGLYTGQF-VYCGKKATLEVGNVMPVGAMPEGTI 362
LP D G + PE G F +YCG++ L+ G P +PEG +
Sbjct: 373 LPMPGNPADYNGLCVGPELTALGSFYLYCGQEG-LQCGGYSPCPMLPEGKL 422
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,155,546
Number of Sequences: 237096
Number of extensions: 2393487
Number of successful extensions: 4871
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 4607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4862
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -