BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--0230 (660 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BT014913-1|AAT47764.1| 256|Drosophila melanogaster RH21963p pro... 143 2e-34 AY071342-1|AAL48964.1| 256|Drosophila melanogaster RE37829p pro... 143 2e-34 AF098520-1|AAF06828.1| 256|Drosophila melanogaster ribosomal pr... 143 2e-34 AE014296-477|AAF47660.1| 256|Drosophila melanogaster CG1263-PB,... 143 2e-34 AE014296-476|AAF47659.1| 256|Drosophila melanogaster CG1263-PA,... 143 2e-34 BT022891-1|AAY55307.1| 579|Drosophila melanogaster IP12501p pro... 141 7e-34 AY113486-1|AAM29491.1| 294|Drosophila melanogaster RE45450p pro... 35 0.11 AE014296-1910|AAF50091.1| 294|Drosophila melanogaster CG7636-PA... 35 0.11 BT010018-1|AAQ22487.1| 605|Drosophila melanogaster RE15062p pro... 30 3.2 AE013599-1290|AAF58652.1| 605|Drosophila melanogaster CG13204-P... 30 3.2 M59926-1|AAA28603.1| 459|Drosophila melanogaster RNA helicase p... 29 5.6 AY051663-1|AAK93087.1| 459|Drosophila melanogaster LD21247p pro... 29 5.6 AE014134-1792|AAN10728.1| 428|Drosophila melanogaster CG4916-PB... 29 5.6 AE014134-1791|AAF52881.2| 459|Drosophila melanogaster CG4916-PA... 29 5.6 DQ991915-1|ABJ09588.1| 2176|Drosophila melanogaster eyes shut pr... 29 7.4 DQ780942-1|ABH07112.1| 2165|Drosophila melanogaster spacemaker p... 29 7.4 AE014134-390|AAZ83988.1| 1984|Drosophila melanogaster CG33955-PB... 29 7.4 >BT014913-1|AAT47764.1| 256|Drosophila melanogaster RH21963p protein. Length = 256 Score = 143 bits (346), Expect = 2e-34 Identities = 83/169 (49%), Positives = 96/169 (56%), Gaps = 1/169 (0%) Frame = +1 Query: 46 AQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDP 225 AQRKGAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPGRGAPLAVVHFRDP Sbjct: 7 AQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAVVHFRDP 66 Query: 226 YKFKTRKELLLLPKGSTQANLFIVERKQXXXXXXXXXXXXXXRVPLCAILKRKWVIEVVW 405 Y++K RKEL + P+G RK + L+ K Sbjct: 67 YRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRL 126 Query: 406 HVPLETSPL*LDTILMLSRQE*SYPSGAKKVC-HQEQSMVGIVAGGGRI 549 + + PSGAKKV ++MVGIVAGGGRI Sbjct: 127 ARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRI 175 Score = 141 bits (342), Expect = 7e-34 Identities = 70/109 (64%), Positives = 83/109 (76%), Gaps = 2/109 (1%) Frame = +3 Query: 255 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATV 434 IAPEG++TGQFVYCG+KATL++GNVMP+ MPEGTI+CNLEEK GDRGRLAR SGN+ATV Sbjct: 77 IAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATV 136 Query: 435 IGHNPDAKPSRVKLPVWSQEGLPS--RTEHGRYCCWRWTYCKPILKAGR 575 I HN D K +RVKLP +++ +PS R G KPILKAGR Sbjct: 137 IAHNQDTKKTRVKLPSGAKKVVPSANRAMVG-IVAGGGRIDKPILKAGR 184 >AY071342-1|AAL48964.1| 256|Drosophila melanogaster RE37829p protein. Length = 256 Score = 143 bits (346), Expect = 2e-34 Identities = 83/169 (49%), Positives = 96/169 (56%), Gaps = 1/169 (0%) Frame = +1 Query: 46 AQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDP 225 AQRKGAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPGRGAPLAVVHFRDP Sbjct: 7 AQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAVVHFRDP 66 Query: 226 YKFKTRKELLLLPKGSTQANLFIVERKQXXXXXXXXXXXXXXRVPLCAILKRKWVIEVVW 405 Y++K RKEL + P+G RK + L+ K Sbjct: 67 YRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRL 126 Query: 406 HVPLETSPL*LDTILMLSRQE*SYPSGAKKVC-HQEQSMVGIVAGGGRI 549 + + PSGAKKV ++MVGIVAGGGRI Sbjct: 127 ARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRI 175 Score = 141 bits (342), Expect = 7e-34 Identities = 70/109 (64%), Positives = 83/109 (76%), Gaps = 2/109 (1%) Frame = +3 Query: 255 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATV 434 IAPEG++TGQFVYCG+KATL++GNVMP+ MPEGTI+CNLEEK GDRGRLAR SGN+ATV Sbjct: 77 IAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATV 136 Query: 435 IGHNPDAKPSRVKLPVWSQEGLPS--RTEHGRYCCWRWTYCKPILKAGR 575 I HN D K +RVKLP +++ +PS R G KPILKAGR Sbjct: 137 IAHNQDTKKTRVKLPSGAKKVVPSANRAMVG-IVAGGGRIDKPILKAGR 184 >AF098520-1|AAF06828.1| 256|Drosophila melanogaster ribosomal protein L8 protein. Length = 256 Score = 143 bits (346), Expect = 2e-34 Identities = 83/169 (49%), Positives = 96/169 (56%), Gaps = 1/169 (0%) Frame = +1 Query: 46 AQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDP 225 AQRKGAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPGRGAPLAVVHFRDP Sbjct: 7 AQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAVVHFRDP 66 Query: 226 YKFKTRKELLLLPKGSTQANLFIVERKQXXXXXXXXXXXXXXRVPLCAILKRKWVIEVVW 405 Y++K RKEL + P+G RK + L+ K Sbjct: 67 YRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRL 126 Query: 406 HVPLETSPL*LDTILMLSRQE*SYPSGAKKVC-HQEQSMVGIVAGGGRI 549 + + PSGAKKV ++MVGIVAGGGRI Sbjct: 127 ARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRI 175 Score = 141 bits (342), Expect = 7e-34 Identities = 70/109 (64%), Positives = 83/109 (76%), Gaps = 2/109 (1%) Frame = +3 Query: 255 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATV 434 IAPEG++TGQFVYCG+KATL++GNVMP+ MPEGTI+CNLEEK GDRGRLAR SGN+ATV Sbjct: 77 IAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATV 136 Query: 435 IGHNPDAKPSRVKLPVWSQEGLPS--RTEHGRYCCWRWTYCKPILKAGR 575 I HN D K +RVKLP +++ +PS R G KPILKAGR Sbjct: 137 IAHNQDTKKTRVKLPSGAKKVVPSANRAMVG-IVAGGGRIDKPILKAGR 184 >AE014296-477|AAF47660.1| 256|Drosophila melanogaster CG1263-PB, isoform B protein. Length = 256 Score = 143 bits (346), Expect = 2e-34 Identities = 83/169 (49%), Positives = 96/169 (56%), Gaps = 1/169 (0%) Frame = +1 Query: 46 AQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDP 225 AQRKGAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPGRGAPLAVVHFRDP Sbjct: 7 AQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAVVHFRDP 66 Query: 226 YKFKTRKELLLLPKGSTQANLFIVERKQXXXXXXXXXXXXXXRVPLCAILKRKWVIEVVW 405 Y++K RKEL + P+G RK + L+ K Sbjct: 67 YRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRL 126 Query: 406 HVPLETSPL*LDTILMLSRQE*SYPSGAKKVC-HQEQSMVGIVAGGGRI 549 + + PSGAKKV ++MVGIVAGGGRI Sbjct: 127 ARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRI 175 Score = 141 bits (342), Expect = 7e-34 Identities = 70/109 (64%), Positives = 83/109 (76%), Gaps = 2/109 (1%) Frame = +3 Query: 255 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATV 434 IAPEG++TGQFVYCG+KATL++GNVMP+ MPEGTI+CNLEEK GDRGRLAR SGN+ATV Sbjct: 77 IAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATV 136 Query: 435 IGHNPDAKPSRVKLPVWSQEGLPS--RTEHGRYCCWRWTYCKPILKAGR 575 I HN D K +RVKLP +++ +PS R G KPILKAGR Sbjct: 137 IAHNQDTKKTRVKLPSGAKKVVPSANRAMVG-IVAGGGRIDKPILKAGR 184 >AE014296-476|AAF47659.1| 256|Drosophila melanogaster CG1263-PA, isoform A protein. Length = 256 Score = 143 bits (346), Expect = 2e-34 Identities = 83/169 (49%), Positives = 96/169 (56%), Gaps = 1/169 (0%) Frame = +1 Query: 46 AQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDP 225 AQRKGAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPGRGAPLAVVHFRDP Sbjct: 7 AQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAVVHFRDP 66 Query: 226 YKFKTRKELLLLPKGSTQANLFIVERKQXXXXXXXXXXXXXXRVPLCAILKRKWVIEVVW 405 Y++K RKEL + P+G RK + L+ K Sbjct: 67 YRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRL 126 Query: 406 HVPLETSPL*LDTILMLSRQE*SYPSGAKKVC-HQEQSMVGIVAGGGRI 549 + + PSGAKKV ++MVGIVAGGGRI Sbjct: 127 ARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRI 175 Score = 141 bits (342), Expect = 7e-34 Identities = 70/109 (64%), Positives = 83/109 (76%), Gaps = 2/109 (1%) Frame = +3 Query: 255 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATV 434 IAPEG++TGQFVYCG+KATL++GNVMP+ MPEGTI+CNLEEK GDRGRLAR SGN+ATV Sbjct: 77 IAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATV 136 Query: 435 IGHNPDAKPSRVKLPVWSQEGLPS--RTEHGRYCCWRWTYCKPILKAGR 575 I HN D K +RVKLP +++ +PS R G KPILKAGR Sbjct: 137 IAHNQDTKKTRVKLPSGAKKVVPSANRAMVG-IVAGGGRIDKPILKAGR 184 >BT022891-1|AAY55307.1| 579|Drosophila melanogaster IP12501p protein. Length = 579 Score = 141 bits (342), Expect = 7e-34 Identities = 70/109 (64%), Positives = 83/109 (76%), Gaps = 2/109 (1%) Frame = +3 Query: 255 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATV 434 IAPEG++TGQFVYCG+KATL++GNVMP+ MPEGTI+CNLEEK GDRGRLAR SGN+ATV Sbjct: 32 IAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATV 91 Query: 435 IGHNPDAKPSRVKLPVWSQEGLPS--RTEHGRYCCWRWTYCKPILKAGR 575 I HN D K +RVKLP +++ +PS R G KPILKAGR Sbjct: 92 IAHNQDTKKTRVKLPSGAKKVVPSANRAMVG-IVAGGGRIDKPILKAGR 139 Score = 78.2 bits (184), Expect = 9e-15 Identities = 51/130 (39%), Positives = 61/130 (46%), Gaps = 1/130 (0%) Frame = +1 Query: 163 KDIIHDPGRGAPLAVVHFRDPYKFKTRKELLLLPKGSTQANLFIVERKQXXXXXXXXXXX 342 KDIIHDPGRGAPLAVVHFRDPY++K RKEL + P+G RK Sbjct: 1 KDIIHDPGRGAPLAVVHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLS 60 Query: 343 XXXRVPLCAILKRKWVIEVVWHVPLETSPL*LDTILMLSRQE*SYPSGAKKVC-HQEQSM 519 + L+ K + + PSGAKKV ++M Sbjct: 61 QMPEGTIICNLEEKTGDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAM 120 Query: 520 VGIVAGGGRI 549 VGIVAGGGRI Sbjct: 121 VGIVAGGGRI 130 >AY113486-1|AAM29491.1| 294|Drosophila melanogaster RE45450p protein. Length = 294 Score = 34.7 bits (76), Expect = 0.11 Identities = 15/39 (38%), Positives = 23/39 (58%) Frame = +3 Query: 321 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 437 G+ P+GA+P GT + LE+ G L A+G F T++ Sbjct: 161 GDAYPLGALPVGTRIHCLEKNPGQMCHLIHAAGTFGTIL 199 >AE014296-1910|AAF50091.1| 294|Drosophila melanogaster CG7636-PA protein. Length = 294 Score = 34.7 bits (76), Expect = 0.11 Identities = 15/39 (38%), Positives = 23/39 (58%) Frame = +3 Query: 321 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 437 G+ P+GA+P GT + LE+ G L A+G F T++ Sbjct: 161 GDAYPLGALPVGTRIHCLEKNPGQMCHLIHAAGTFGTIL 199 >BT010018-1|AAQ22487.1| 605|Drosophila melanogaster RE15062p protein. Length = 605 Score = 29.9 bits (64), Expect = 3.2 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 4/58 (6%) Frame = +3 Query: 441 HNPDAKPSRVKLPVWSQ----EGLPSRTEHGRYCCWRWTYCKPILKAGRXSTSTXQTY 602 HNPD K VKL VW+Q GL ++ R +Y K L++ R T T + Y Sbjct: 37 HNPDYKNVEVKLKVWTQIADEIGLSVEASKRKWKNLRDSYTK-YLRSFRVGTKTSKKY 93 >AE013599-1290|AAF58652.1| 605|Drosophila melanogaster CG13204-PA, isoform A protein. Length = 605 Score = 29.9 bits (64), Expect = 3.2 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 4/58 (6%) Frame = +3 Query: 441 HNPDAKPSRVKLPVWSQ----EGLPSRTEHGRYCCWRWTYCKPILKAGRXSTSTXQTY 602 HNPD K VKL VW+Q GL ++ R +Y K L++ R T T + Y Sbjct: 37 HNPDYKNVEVKLKVWTQIADEIGLSVEASKRKWKNLRDSYTK-YLRSFRVGTKTSKKY 93 >M59926-1|AAA28603.1| 459|Drosophila melanogaster RNA helicase protein. Length = 459 Score = 29.1 bits (62), Expect = 5.6 Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 10/79 (12%) Frame = +1 Query: 103 APKLRSLDYAERHGYIKGVVKDIIHDP-----GRGAPLAVV-----HFRDPYKFKTRKEL 252 A KL SLD+ G + V+ + DP PL V H R+PY+ +EL Sbjct: 209 ADKLLSLDF---QGMLDHVILKLPKDPQILLFSATFPLTVKNFMEKHLREPYEINLMEEL 265 Query: 253 LLLPKGSTQANLFIVERKQ 309 L KG TQ F+ ER++ Sbjct: 266 TL--KGVTQYYAFVQERQK 282 >AY051663-1|AAK93087.1| 459|Drosophila melanogaster LD21247p protein. Length = 459 Score = 29.1 bits (62), Expect = 5.6 Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 10/79 (12%) Frame = +1 Query: 103 APKLRSLDYAERHGYIKGVVKDIIHDP-----GRGAPLAVV-----HFRDPYKFKTRKEL 252 A KL SLD+ G + V+ + DP PL V H R+PY+ +EL Sbjct: 209 ADKLLSLDF---QGMLDHVILKLPKDPQILLFSATFPLTVKNFMEKHLREPYEINLMEEL 265 Query: 253 LLLPKGSTQANLFIVERKQ 309 L KG TQ F+ ER++ Sbjct: 266 TL--KGVTQYYAFVQERQK 282 >AE014134-1792|AAN10728.1| 428|Drosophila melanogaster CG4916-PB, isoform B protein. Length = 428 Score = 29.1 bits (62), Expect = 5.6 Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 10/79 (12%) Frame = +1 Query: 103 APKLRSLDYAERHGYIKGVVKDIIHDP-----GRGAPLAVV-----HFRDPYKFKTRKEL 252 A KL SLD+ G + V+ + DP PL V H R+PY+ +EL Sbjct: 178 ADKLLSLDF---QGMLDHVILKLPKDPQILLFSATFPLTVKNFMEKHLREPYEINLMEEL 234 Query: 253 LLLPKGSTQANLFIVERKQ 309 L KG TQ F+ ER++ Sbjct: 235 TL--KGVTQYYAFVQERQK 251 >AE014134-1791|AAF52881.2| 459|Drosophila melanogaster CG4916-PA, isoform A protein. Length = 459 Score = 29.1 bits (62), Expect = 5.6 Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 10/79 (12%) Frame = +1 Query: 103 APKLRSLDYAERHGYIKGVVKDIIHDP-----GRGAPLAVV-----HFRDPYKFKTRKEL 252 A KL SLD+ G + V+ + DP PL V H R+PY+ +EL Sbjct: 209 ADKLLSLDF---QGMLDHVILKLPKDPQILLFSATFPLTVKNFMEKHLREPYEINLMEEL 265 Query: 253 LLLPKGSTQANLFIVERKQ 309 L KG TQ F+ ER++ Sbjct: 266 TL--KGVTQYYAFVQERQK 282 >DQ991915-1|ABJ09588.1| 2176|Drosophila melanogaster eyes shut protein. Length = 2176 Score = 28.7 bits (61), Expect = 7.4 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Frame = -3 Query: 397 PLSPIFSSRLHTMVPSGIAPTGITFPTSRVAFFPQ*TNWPV*S-PSGAIRAPSL 239 P +P ++ + +VP+ IAP G P + A P T P S PS A P+L Sbjct: 878 PFAPAETTVVPVVVPATIAPLGTAAPPATPAPVPPATTTPPPSPPSLATETPTL 931 >DQ780942-1|ABH07112.1| 2165|Drosophila melanogaster spacemaker protein. Length = 2165 Score = 28.7 bits (61), Expect = 7.4 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Frame = -3 Query: 397 PLSPIFSSRLHTMVPSGIAPTGITFPTSRVAFFPQ*TNWPV*S-PSGAIRAPSL 239 P +P ++ + +VP+ IAP G P + A P T P S PS A P+L Sbjct: 867 PFAPAETTVVPVVVPATIAPLGTAAPPATPAPVPPATTTPPPSPPSLATETPTL 920 >AE014134-390|AAZ83988.1| 1984|Drosophila melanogaster CG33955-PB protein. Length = 1984 Score = 28.7 bits (61), Expect = 7.4 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Frame = -3 Query: 397 PLSPIFSSRLHTMVPSGIAPTGITFPTSRVAFFPQ*TNWPV*S-PSGAIRAPSL 239 P +P ++ + +VP+ IAP G P + A P T P S PS A P+L Sbjct: 671 PFAPAETTVVPVVVPATIAPLGTAAPPATPAPVPPATTTPPPSPPSLATETPTL 724 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 31,138,658 Number of Sequences: 53049 Number of extensions: 709315 Number of successful extensions: 1687 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 1580 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1681 length of database: 24,988,368 effective HSP length: 82 effective length of database: 20,638,350 effective search space used: 2827453950 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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