Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0230
(660 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 24 1.5
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 2.0
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 2.0
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 2.0
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 2.0
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 22 4.5
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 22 4.5
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 4.5
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 4.5
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 4.5
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 4.5
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 22 4.5
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 22 4.5
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 22 4.5
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 22 4.5
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 4.5
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 22 4.5
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 4.5
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 4.5
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 4.5
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 22 4.5
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 4.5
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 4.5
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 4.5
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 4.5
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 23.8 bits (49), Expect = 1.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 213 LPRSIQVQDKEGALIAPEGLYTGQFVYCGK 302
L +S++ DKE L LY +F Y GK
Sbjct: 508 LNKSLKYSDKERDLSLRMILYFSEFAYLGK 537
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -2
Query: 386 HFLFKIAHNGTLRHSSNRHHI 324
HF +I NGT+ + RH I
Sbjct: 163 HFALRIYRNGTVNYLMRRHLI 183
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -2
Query: 386 HFLFKIAHNGTLRHSSNRHHI 324
HF +I NGT+ + RH I
Sbjct: 163 HFALRIYRNGTVNYLMRRHLI 183
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -2
Query: 386 HFLFKIAHNGTLRHSSNRHHI 324
HF +I NGT+ + RH I
Sbjct: 214 HFALRIYRNGTVNYLMRRHLI 234
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -2
Query: 386 HFLFKIAHNGTLRHSSNRHHI 324
HF +I NGT+ + RH I
Sbjct: 163 HFALRIYRNGTVNYLMRRHLI 183
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.2 bits (45), Expect = 4.5
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 224 HTSSRQGRSSYCSR 265
HTSSR R CSR
Sbjct: 215 HTSSRYSRERSCSR 228
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.2 bits (45), Expect = 4.5
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 224 HTSSRQGRSSYCSR 265
HTSSR R CSR
Sbjct: 226 HTSSRYSRERRCSR 239
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.2 bits (45), Expect = 4.5
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 224 HTSSRQGRSSYCSR 265
HTSSR R CSR
Sbjct: 215 HTSSRYSRERSCSR 228
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.2 bits (45), Expect = 4.5
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 224 HTSSRQGRSSYCSR 265
HTSSR R CSR
Sbjct: 226 HTSSRYSRERSCSR 239
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 4.5
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 224 HTSSRQGRSSYCSR 265
HTSSR R CSR
Sbjct: 226 HTSSRYSRERSCSR 239
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.2 bits (45), Expect = 4.5
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 224 HTSSRQGRSSYCSR 265
HTSSR R CSR
Sbjct: 226 HTSSRYSRERSCSR 239
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.2 bits (45), Expect = 4.5
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 224 HTSSRQGRSSYCSR 265
HTSSR R CSR
Sbjct: 215 HTSSRYSRERSCSR 228
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 4.5
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 224 HTSSRQGRSSYCSR 265
HTSSR R CSR
Sbjct: 226 HTSSRYSRERSCSR 239
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 4.5
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 224 HTSSRQGRSSYCSR 265
HTSSR R CSR
Sbjct: 226 HTSSRYSRERSCSR 239
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.2 bits (45), Expect = 4.5
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 224 HTSSRQGRSSYCSR 265
HTSSR R CSR
Sbjct: 215 HTSSRYSRERSCSR 228
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 4.5
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 224 HTSSRQGRSSYCSR 265
HTSSR R CSR
Sbjct: 226 HTSSRYSRERSCSR 239
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 22.2 bits (45), Expect = 4.5
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 224 HTSSRQGRSSYCSR 265
HTSSR R CSR
Sbjct: 226 HTSSRYSRERSCSR 239
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 4.5
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 224 HTSSRQGRSSYCSR 265
HTSSR R CSR
Sbjct: 226 HTSSRYSRERSCSR 239
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 4.5
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 224 HTSSRQGRSSYCSR 265
HTSSR R CSR
Sbjct: 226 HTSSRYSRERSCSR 239
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.2 bits (45), Expect = 4.5
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 224 HTSSRQGRSSYCSR 265
HTSSR R CSR
Sbjct: 215 HTSSRYSRERSCSR 228
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 22.2 bits (45), Expect = 4.5
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 224 HTSSRQGRSSYCSR 265
HTSSR R CSR
Sbjct: 231 HTSSRYSRERSCSR 244
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 22.2 bits (45), Expect = 4.5
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 224 HTSSRQGRSSYCSR 265
HTSSR R CSR
Sbjct: 226 HTSSRYSRERSCSR 239
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 22.2 bits (45), Expect = 4.5
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 224 HTSSRQGRSSYCSR 265
HTSSR R CSR
Sbjct: 226 HTSSRYSRERSCSR 239
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 22.2 bits (45), Expect = 4.5
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 224 HTSSRQGRSSYCSR 265
HTSSR R CSR
Sbjct: 226 HTSSRYSRERSCSR 239
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 22.2 bits (45), Expect = 4.5
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 224 HTSSRQGRSSYCSR 265
HTSSR R CSR
Sbjct: 226 HTSSRYSRERSCSR 239
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,889
Number of Sequences: 438
Number of extensions: 3901
Number of successful extensions: 26
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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