Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0229
(666 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggeri... 23 2.2
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 23 2.2
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 23 2.2
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 23 2.2
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 23 2.2
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 23 2.2
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 23 2.2
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 23 2.2
X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Triboliu... 21 9.1
U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II p... 21 9.1
U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I pr... 21 9.1
>EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggering
hormone receptorisoform B protein.
Length = 451
Score = 23.0 bits (47), Expect = 2.2
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +1
Query: 46 VAILRAMPNLGIIYGNRDRESDGKMVFDVIQRMEDTEP 159
+A L P L I + DG +VF +EDT P
Sbjct: 197 IAALFTSPILAITQYGPEEYVDGSIVFVCFSLVEDTLP 234
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.2
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +1
Query: 247 LNDPLNISWTTSTG*EQRI---TSPPNKIS*GLXSKRLESXKYISPSKTSISNCSTWAGX 417
L+ P N + T S+G + TSPP K + S+ L S + S +S T
Sbjct: 129 LSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNN 188
Query: 418 DRRGRN 435
+ G++
Sbjct: 189 SKSGQS 194
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 23.0 bits (47), Expect = 2.2
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +1
Query: 247 LNDPLNISWTTSTG*EQRI---TSPPNKIS*GLXSKRLESXKYISPSKTSISNCSTWAGX 417
L+ P N + T S+G + TSPP K + S+ L S + S +S T
Sbjct: 129 LSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNN 188
Query: 418 DRRGRN 435
+ G++
Sbjct: 189 SKSGQS 194
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.2
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +1
Query: 247 LNDPLNISWTTSTG*EQRI---TSPPNKIS*GLXSKRLESXKYISPSKTSISNCSTWAGX 417
L+ P N + T S+G + TSPP K + S+ L S + S +S T
Sbjct: 129 LSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNN 188
Query: 418 DRRGRN 435
+ G++
Sbjct: 189 SKSGQS 194
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 23.0 bits (47), Expect = 2.2
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +1
Query: 247 LNDPLNISWTTSTG*EQRI---TSPPNKIS*GLXSKRLESXKYISPSKTSISNCSTWAGX 417
L+ P N + T S+G + TSPP K + S+ L S + S +S T
Sbjct: 129 LSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNN 188
Query: 418 DRRGRN 435
+ G++
Sbjct: 189 SKSGQS 194
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 23.0 bits (47), Expect = 2.2
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +1
Query: 247 LNDPLNISWTTSTG*EQRI---TSPPNKIS*GLXSKRLESXKYISPSKTSISNCSTWAGX 417
L+ P N + T S+G + TSPP K + S+ L S + S +S T
Sbjct: 85 LSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNN 144
Query: 418 DRRGRN 435
+ G++
Sbjct: 145 SKSGQS 150
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.2
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +1
Query: 247 LNDPLNISWTTSTG*EQRI---TSPPNKIS*GLXSKRLESXKYISPSKTSISNCSTWAGX 417
L+ P N + T S+G + TSPP K + S+ L S + S +S T
Sbjct: 129 LSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNN 188
Query: 418 DRRGRN 435
+ G++
Sbjct: 189 SKSGQS 194
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.2
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +1
Query: 247 LNDPLNISWTTSTG*EQRI---TSPPNKIS*GLXSKRLESXKYISPSKTSISNCSTWAGX 417
L+ P N + T S+G + TSPP K + S+ L S + S +S T
Sbjct: 129 LSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNN 188
Query: 418 DRRGRN 435
+ G++
Sbjct: 189 SKSGQS 194
>X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Tribolium
castaneum mRNAfor alhpa amylase 3'region. ).
Length = 489
Score = 21.0 bits (42), Expect = 9.1
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +1
Query: 196 WADSGVQECFGRSNE 240
W+D Q FGR N+
Sbjct: 404 WSDGNQQIAFGRGNK 418
>U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II
protein.
Length = 490
Score = 21.0 bits (42), Expect = 9.1
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +1
Query: 196 WADSGVQECFGRSNE 240
W+D Q FGR N+
Sbjct: 405 WSDGNQQIAFGRGNK 419
>U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I
protein.
Length = 490
Score = 21.0 bits (42), Expect = 9.1
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +1
Query: 196 WADSGVQECFGRSNE 240
W+D Q FGR N+
Sbjct: 405 WSDGNQQIAFGRGNK 419
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,735
Number of Sequences: 336
Number of extensions: 3147
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -