Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0227
(654 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0618 + 18988614-18989102,18989913-18990314,18990555-189908... 36 0.021
10_08_0493 + 18299885-18299892,18300201-18300837,18301254-183016... 34 0.086
08_01_0673 - 5805218-5805349,5805936-5806026,5806416-5806471,580... 33 0.20
02_02_0119 + 6978697-6979045,6979519-6979581,6979757-6979866,697... 33 0.26
10_08_0008 - 14046647-14047462,14050744-14051499 31 1.1
09_06_0081 + 20745627-20748144,20748211-20748308 31 1.1
08_01_0080 + 566509-566746,566904-567151,567347-567532,567639-56... 30 1.9
09_06_0309 - 22206812-22206884,22207008-22207103,22207531-222076... 29 2.4
08_01_0311 - 2753062-2753232,2753340-2753381,2754490-2754667,275... 29 3.2
06_03_1280 - 28930959-28931540 29 3.2
01_05_0111 - 18230195-18230239,18230541-18230615,18231379-182315... 29 3.2
11_06_0693 - 26334574-26336121 29 4.3
10_06_0029 + 9822216-9823124,9825210-9825329,9826188-9826304,982... 29 4.3
09_06_0123 - 20997498-20997512,20998015-20998100,20999066-209991... 29 4.3
07_03_0549 - 19352545-19353420 29 4.3
04_04_1704 - 35481041-35481461,35481682-35481810,35482291-354823... 29 4.3
12_01_0487 - 3860618-3860852,3860964-3861121,3861266-3861805 28 5.6
06_01_0942 - 7242389-7243160,7243293-7243822,7245878-7246095,724... 28 5.6
05_02_0067 + 6298232-6298294,6298532-6299068 28 5.6
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 28 5.6
01_06_1593 + 38502884-38502993,38503580-38503665,38504352-385044... 28 5.6
09_04_0291 + 16433097-16433942,16434708-16434851,16435226-164353... 28 7.5
05_04_0342 - 20425141-20425311,20425415-20425558,20426506-204266... 28 7.5
04_04_0962 + 29728983-29729034,29729622-29731369,29731656-297317... 28 7.5
03_04_0146 - 17688710-17688781,17689186-17689437 28 7.5
02_01_0156 - 1086750-1086920,1087680-1087847,1087935-1088171,108... 28 7.5
09_03_0179 - 13131404-13131514,13131834-13131920,13132316-131324... 27 9.9
08_01_0133 + 1062365-1063057,1063210-1063318,1063914-1064005,106... 27 9.9
06_03_0766 - 24425486-24426245,24430766-24430855,24430951-244310... 27 9.9
01_06_1590 + 38482859-38483428 27 9.9
>09_04_0618 +
18988614-18989102,18989913-18990314,18990555-18990806,
18991564-18991941,18992350-18992426,18992700-18992808,
18993424-18993574,18993810-18993903,18997072-18997474,
18997590-18997742,18998115-18998474
Length = 955
Score = 36.3 bits (80), Expect = 0.021
Identities = 13/53 (24%), Positives = 31/53 (58%)
Frame = +2
Query: 104 IHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQKICAVEEHK 262
+ + + +VG +IGK GS + ++++TGAS+ + S++++ + H+
Sbjct: 245 VFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNSDSEERVIVISAHE 297
>10_08_0493 +
18299885-18299892,18300201-18300837,18301254-18301676,
18301769-18302014,18302124-18302789,18303228-18303283,
18303367-18303460,18303559-18303738
Length = 769
Score = 34.3 bits (75), Expect = 0.086
Identities = 16/53 (30%), Positives = 32/53 (60%)
Frame = +2
Query: 110 QFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQKICAVEEHKVK 268
+ V+ N VG +IG+ G +T+++ +TGA +R + ++ K K + +E V+
Sbjct: 388 RLVVPSNKVGCIIGEGGKVITEMRRRTGAE--IRVYSKADKPKYLSFDEELVQ 438
Score = 31.5 bits (68), Expect = 0.61
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 104 IHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYV 208
I + ++ N VG L+GK GS + Q++ TGA + V
Sbjct: 163 IARILVPGNQVGCLLGKGGSIIQQLRNDTGAGIRV 197
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +2
Query: 134 VGLLIGKHGSFVTQIKAKTGASVYVRR-HPESSKQKICAVEEHKV 265
+G +IGK G V Q++ +TGA V V+ +S++++ V ++
Sbjct: 313 IGQVIGKSGGNVRQVEQQTGACVQVKEVGKNASEERLIVVSSQEI 357
>08_01_0673 -
5805218-5805349,5805936-5806026,5806416-5806471,
5806571-5806852,5806924-5807057,5807088-5807163,
5807247-5807747,5808454-5809037,5809579-5809597
Length = 624
Score = 33.1 bits (72), Expect = 0.20
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +2
Query: 131 LVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSK 232
++G LIGK GS V +++KT A++Y+ + + K
Sbjct: 396 VIGCLIGKGGSIVNDMRSKTKAAIYISKGEKPRK 429
>02_02_0119 +
6978697-6979045,6979519-6979581,6979757-6979866,
6979969-6980154,6980266-6980361,6980493-6980564,
6980798-6980909,6982448-6982534,6982680-6983872
Length = 755
Score = 32.7 bits (71), Expect = 0.26
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +2
Query: 110 QFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYV 208
Q ++ N VGL+IGK G + ++AK+GA + V
Sbjct: 261 QMKIANNKVGLVIGKGGETIKSMQAKSGARIQV 293
>10_08_0008 - 14046647-14047462,14050744-14051499
Length = 523
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 432 DVSGECGALLPSAAPAPHVSALTCFTAMAARPEP 533
D++GE G P+ A A +AL +T A+RP P
Sbjct: 67 DLAGELGPSAPALAVACWAAALAAYTYAASRPRP 100
>09_06_0081 + 20745627-20748144,20748211-20748308
Length = 871
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 471 APAPHVSALTCFTAMAARPEPRVPSLHAP 557
APAPH+ A +C A A P P P+ H P
Sbjct: 257 APAPHLRAPSCTLAPPA-PTPPAPTFHVP 284
>08_01_0080 +
566509-566746,566904-567151,567347-567532,567639-567734,
567836-567907,567990-568106,570531-571676
Length = 700
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/38 (31%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +2
Query: 110 QFVLSQNLVGLLIGKHGSFVTQIKAKTGASV-YVRRHP 220
+ ++ N VGL+IGK G + ++ ++GA + + +HP
Sbjct: 249 EMLVPDNKVGLIIGKGGETIKTLQTRSGARIQLIPQHP 286
>09_06_0309 -
22206812-22206884,22207008-22207103,22207531-22207619,
22207738-22207820,22207932-22208048,22208132-22208319,
22208430-22208500,22208570-22208782,22210022-22210081,
22210186-22210476,22210590-22211894
Length = 861
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 20 SDSGKGCSEAASPPPASLNIVPT 88
S+ G GC ASPPP ++ + PT
Sbjct: 410 SEGGDGCIWLASPPPPAIALAPT 432
>08_01_0311 -
2753062-2753232,2753340-2753381,2754490-2754667,
2755021-2755118,2755964-2756098,2756280-2756444,
2756529-2756693,2757082-2757299,2758508-2758811
Length = 491
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -3
Query: 553 ACNDGTRGSGRAAIAVKHVSAETWGAGAAEGRSA 452
A N+G+ GSG + K V+ W G A G+ +
Sbjct: 446 AKNEGSAGSGSCLLCYKRVTRPDWRRGPAPGKGS 479
>06_03_1280 - 28930959-28931540
Length = 193
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +3
Query: 423 HDIDVSGECGALLPSAAPAPHVSALTCFTAMAARPEPRVPSL 548
H S C + P+AA A S C+ A AARP P L
Sbjct: 130 HPPQPSSSCSSSKPAAAAASSGSPERCYLAAAARPAAWKPRL 171
>01_05_0111 -
18230195-18230239,18230541-18230615,18231379-18231566,
18232416-18232739,18232926-18233115
Length = 273
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/66 (33%), Positives = 26/66 (39%)
Frame = +2
Query: 5 TXEGSSDSGKGCSEAASPPPASLNIVPTETDLRIHQFVLSQNLVGLLIGKHGSFVTQIKA 184
T +SD GKGC PP S + P T R F + G G H S T K
Sbjct: 166 TFRNNSDQGKGC---GIPPVPSPHPTPVTTQKRFRVFGVRTPGGGYGKGLHRSLTTHEKE 222
Query: 185 KTGASV 202
+ SV
Sbjct: 223 EVVESV 228
>11_06_0693 - 26334574-26336121
Length = 515
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 459 LPSAAPAPHVSALTCFTAMAARPEPRVPSL 548
LPS+ P+PH +L +++ P P +P L
Sbjct: 55 LPSSPPSPHHHSLAALLLLSSPPPPALPLL 84
>10_06_0029 +
9822216-9823124,9825210-9825329,9826188-9826304,
9826387-9826476,9826706-9826756
Length = 428
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 456 LLPSAAPAPHVSALTCFTAMAARPEPRVPSLHA 554
L P+AA AP+ +A C T + P S HA
Sbjct: 18 LAPAAAHAPNSAAAACSTPRRGKTSPHASSRHA 50
>09_06_0123 -
20997498-20997512,20998015-20998100,20999066-20999198,
20999264-20999341,21000130-21000216,21001164-21001254,
21001338-21001488,21001567-21002296,21002404-21002820
Length = 595
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/51 (37%), Positives = 23/51 (45%)
Frame = -3
Query: 556 GACNDGTRGSGRAAIAVKHVSAETWGAGAAEGRSAPHSPDTSISCRYSQIR 404
G+ NDG GSG + + T GAG A + HS TS S S R
Sbjct: 214 GSWNDGGLGSGSGSNSSYGHGNSTNGAGGANMNNIIHSSGTSSSANDSSRR 264
>07_03_0549 - 19352545-19353420
Length = 291
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +3
Query: 456 LLPSAAPAPHVSALTCFTAMAARPEPRVPSLHAP*KRSYLAAL*NIXSAN 605
LLP P+P ++A A RP PR+ S AP +R A L SA+
Sbjct: 3 LLPQILPSPRLAAAAASPNSAFRPAPRLHS-SAPARRGRGARLATAASAS 51
>04_04_1704 -
35481041-35481461,35481682-35481810,35482291-35482397,
35482515-35482583,35482825-35482936,35483013-35483131,
35483211-35483291,35483629-35483700,35484039-35484239,
35484442-35484528,35485284-35485523,35485991-35486455,
35487434-35487556,35487643-35487769,35487851-35487919,
35488061-35488189,35488628-35488722,35488808-35488876,
35489332-35489443,35489545-35489663,35489753-35489833,
35490898-35490969,35491052-35491267,35491524-35491601,
35491694-35491831,35492403-35492414,35492639-35492872,
35493076-35493130,35493222-35493352,35493813-35494546,
35494613-35494820
Length = 1634
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 462 PSAAPAPHVSALTCFTAMAARPEPRVPSLH 551
P+A P PHVS L C A+ A P+P L+
Sbjct: 120 PTARPRPHVSPLPC--ALHADPDPSQSQLN 147
>12_01_0487 - 3860618-3860852,3860964-3861121,3861266-3861805
Length = 310
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +2
Query: 74 NIVPTETDLRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHP 220
++V DL L GLL H + ++ AS++ RRHP
Sbjct: 24 SVVARALDLGYSAVALDHPHRGLLTDSHAPIASSLRVSPSASLHRRRHP 72
>06_01_0942 -
7242389-7243160,7243293-7243822,7245878-7246095,
7246380-7246425
Length = 521
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +3
Query: 450 GALLPSAAPAPHVSALTCFTAMAARPEPRVPSLHAP*KRSYLAAL 584
G +P+A A V+A C T + + +PRV H P + S L AL
Sbjct: 192 GFAVPAAVMAVSVAAFFCCTPLYKKRQPRVVH-HKPCRDSVLKAL 235
>05_02_0067 + 6298232-6298294,6298532-6299068
Length = 199
Score = 28.3 bits (60), Expect = 5.6
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = -2
Query: 569 APFSRGVQRRHTGFWTCGHSREA---RQRGNVGCRGC*RKKCPALTRHVNIVSLFTDSTN 399
A + R ++ H G W CG EA R RG G G AL H+ + F +T
Sbjct: 89 AAYIRHIRAAHYGDWVCGLCAEAVRERMRGGGGGGGV----EAALRWHMEVCRDFNSTTR 144
Query: 398 CNCKNS 381
N K S
Sbjct: 145 LNPKLS 150
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +2
Query: 128 NLVGLLIGKHGSFVTQIKAKTGASVYVR 211
N +GL+IG G+ +++ +TGA + +R
Sbjct: 110 NFIGLIIGPRGNTQKRMEKETGAKIVIR 137
>01_06_1593 +
38502884-38502993,38503580-38503665,38504352-38504497,
38504817-38504933,38505028-38505144,38505858-38506001,
38506099-38506251
Length = 290
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 128 NLVGLLIGKHGSFVTQIKAKTGASVYVR 211
N VG L+G G+ + +++A T VY+R
Sbjct: 155 NFVGRLLGPRGNSLKRVEASTQCRVYIR 182
>09_04_0291 +
16433097-16433942,16434708-16434851,16435226-16435390,
16435551-16435562
Length = 388
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1
Query: 340 ISAELYQKLTPLIPEFLQLQLVESVNNDTILTCLVSAGHFFLQQP 474
++AELY L P + FLQ+ V S NN+ L+ + LQ P
Sbjct: 344 LAAELYGNLCPSLL-FLQMSYVTSQNNEMDFIRLILSKARMLQDP 387
>05_04_0342 -
20425141-20425311,20425415-20425558,20426506-20426622,
20426719-20426835,20427533-20427678,20428208-20428293,
20428780-20428889
Length = 296
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 128 NLVGLLIGKHGSFVTQIKAKTGASVYVR 211
N VG L+G G+ + +++A T VY+R
Sbjct: 155 NFVGRLLGPRGNSLKRVEATTQCRVYIR 182
>04_04_0962 +
29728983-29729034,29729622-29731369,29731656-29731742,
29732035-29732199,29732437-29732526,29732863-29733027,
29733124-29733418,29733550-29733764,29733879-29733947,
29734107-29734184,29734466-29734529,29734658-29734897,
29734985-29735124
Length = 1135
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 119 LSQNLV-GLLIGKHGSFVTQIKAKTGASVYV-RRHPESSK 232
L QN+ G++ G H V Q+ G S+Y+ + H ES K
Sbjct: 645 LQQNMAFGVIFGAHFCAVEQVCNAKGTSIYLSKHHAESEK 684
>03_04_0146 - 17688710-17688781,17689186-17689437
Length = 107
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 29 GKGCSEAASPPPASLNIVPTETDL 100
G G + SPPP SL+ +P TDL
Sbjct: 7 GDGGDDRPSPPPLSLSRLPPATDL 30
>02_01_0156 -
1086750-1086920,1087680-1087847,1087935-1088171,
1088763-1089073,1089343-1089571
Length = 371
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 446 VRGTSSFSSPCTPRFRADVLHGYGRTSRTPCAVV 547
++G F PCTP+ ++LH YG + AVV
Sbjct: 210 MQGRDPFFVPCTPKGCMELLHRYGVEIKGKRAVV 243
>09_03_0179 -
13131404-13131514,13131834-13131920,13132316-13132448,
13133079-13133319,13133423-13133540,13133546-13133731,
13133864-13134049,13134443-13134652,13135171-13135347,
13135823-13135964,13136385-13136927,13137565-13138022
Length = 863
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -3
Query: 547 NDGTRGSGRAAIAVKHVSAETWGAGAAEGRSAPHSPDTSISCRYSQIRPTVIV 389
++G GS A A KH + T AGA + + P S + +Y+ + T +V
Sbjct: 580 SNGATGSEAVAAAEKHAALLTARAGARDPSAVPSICRISTALQYNSGKFTAVV 632
>08_01_0133 +
1062365-1063057,1063210-1063318,1063914-1064005,
1064399-1064560,1064718-1064834,1065029-1065127
Length = 423
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 17 SSDSGKGCSEAASPPPASLNIVPTET-DLRIHQFV 118
SSDS + S ++S PP +V E+ DL H+ V
Sbjct: 140 SSDSWRSSSSSSSSPPKKKKVVVVESADLETHESV 174
>06_03_0766 -
24425486-24426245,24430766-24430855,24430951-24431070,
24431568-24431746,24432046-24432231,24432454-24432547,
24432679-24432743,24433652-24433987
Length = 609
Score = 27.5 bits (58), Expect = 9.9
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +2
Query: 53 SPPPASLNIVPTET--DLRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPES 226
+PP +IVP T + + +L G +IGK G+ I TGA + +R + +
Sbjct: 463 APPMPGPDIVPPSTFGASATAKISVDASLAGGIIGKGGTNTKHISRMTGAKLAIRDNESN 522
Query: 227 SKQKICAVE 253
K +E
Sbjct: 523 PNLKNIELE 531
>01_06_1590 + 38482859-38483428
Length = 189
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -3
Query: 556 GACNDGTRGSGRAAIAVKHVSAETWGAGAAEGRSAPHS 443
G DG G G A + +A T+G GAA R +P S
Sbjct: 65 GGAGDG--GGGGATLNFPERAAATYGGGAAVARLSPRS 100
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,226,099
Number of Sequences: 37544
Number of extensions: 355819
Number of successful extensions: 1202
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1201
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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