Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0227
         (654 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         25   2.1  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         25   2.1  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   6.4  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    23   6.4  
AF080546-1|AAC29475.1|  432|Anopheles gambiae S-adenosyl-L-homoc...    23   6.4  

>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +2

Query: 2   CTXEGSSDSGKGCSEAASPPPASLNIVPTETDLRIHQ 112
           CT   S+ S  G S A+SP    +++V   + L I Q
Sbjct: 42  CTTTTSTTSTSGASAASSPTRDEMSVVVPISPLHIKQ 78


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +2

Query: 2   CTXEGSSDSGKGCSEAASPPPASLNIVPTETDLRIHQ 112
           CT   S+ S  G S A+SP    +++V   + L I Q
Sbjct: 42  CTTTTSTTSTSGASAASSPTRDEMSVVVPISPLHIKQ 78


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +3

Query: 423 HDIDVSGECGALLPS 467
           HD+DV G  GA  PS
Sbjct: 273 HDLDVGGAAGAAEPS 287


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 409 SVNNDTILTCLVSAGHFFLQQPL 477
           S+  D  L  L+  GHFFLQ P+
Sbjct: 674 SLKEDNSLLSLI--GHFFLQTPI 694


>AF080546-1|AAC29475.1|  432|Anopheles gambiae
           S-adenosyl-L-homocysteine hydrolase protein.
          Length = 432

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 2   CTXEGSSDSGKGCSEA 49
           C   G  D GKGC++A
Sbjct: 216 CVVAGYGDVGKGCAQA 231


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 658,806
Number of Sequences: 2352
Number of extensions: 12897
Number of successful extensions: 22
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)