Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0227
(654 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X97335-1|CAA66000.1| 903|Homo sapiens kinase A anchor protein ... 47 5e-05
BC000729-1|AAH00729.1| 903|Homo sapiens A kinase (PRKA) anchor ... 47 5e-05
X78137-1|CAA55016.1| 356|Homo sapiens hnRNP-E1 protein. 34 0.39
X72727-1|CAA51267.1| 464|Homo sapiens transformation upregulate... 34 0.39
U97188-1|AAC35208.1| 579|Homo sapiens putative RNA binding prot... 34 0.39
U76705-1|AAD09223.1| 579|Homo sapiens Koc1 protein. 34 0.39
U24223-1|AAA91317.1| 356|Homo sapiens alpha-CP1 protein. 34 0.39
S74678-1|AAB20770.1| 463|Homo sapiens heterogeneous nuclear rib... 34 0.39
CR456771-1|CAG33052.1| 464|Homo sapiens HNRPK protein. 34 0.39
BC039742-1|AAH39742.1| 356|Homo sapiens poly(rC) binding protei... 34 0.39
BC014980-1|AAH14980.1| 463|Homo sapiens heterogeneous nuclear r... 34 0.39
BC012061-1|AAH12061.1| 313|Homo sapiens PCBP3 protein protein. 34 0.39
BC000355-1|AAH00355.1| 464|Homo sapiens heterogeneous nuclear r... 34 0.39
AY911506-1|AAW84289.1| 464|Homo sapiens heterogeneous nuclear r... 34 0.39
AY780793-1|AAV98363.1| 361|Homo sapiens poly(rC) binding protei... 34 0.39
AL354733-11|CAI16021.1| 464|Homo sapiens heterogeneous nuclear ... 34 0.39
AL354733-10|CAI16020.1| 463|Homo sapiens heterogeneous nuclear ... 34 0.39
AL354733-9|CAI16019.1| 428|Homo sapiens heterogeneous nuclear r... 34 0.39
AK094301-1|BAC04327.1| 351|Homo sapiens protein ( Homo sapiens ... 34 0.39
AF176329-1|AAG09240.1| 339|Homo sapiens alphaCP-3 protein. 34 0.39
AC016700-1|AAX93191.1| 356|Homo sapiens unknown protein. 34 0.39
AB209562-1|BAD92799.1| 442|Homo sapiens heterogeneous nuclear r... 34 0.39
BC017098-1|AAH17098.1| 360|Homo sapiens PCBP4 protein protein. 34 0.51
BC004153-1|AAH04153.1| 403|Homo sapiens poly(rC) binding protei... 34 0.51
BC003008-1|AAH03008.1| 403|Homo sapiens poly(rC) binding protei... 34 0.51
AK023993-1|BAB14761.1| 403|Homo sapiens protein ( Homo sapiens ... 34 0.51
AF257772-1|AAG02186.1| 424|Homo sapiens RNA binding protein MCG... 34 0.51
AF257771-1|AAG02185.1| 369|Homo sapiens RNA binding protein MCG... 34 0.51
AF257770-1|AAG02184.1| 424|Homo sapiens RNA binding protein MCG... 34 0.51
AF176330-1|AAG09241.1| 403|Homo sapiens alphaCP-4 protein. 34 0.51
AF141340-1|AAG49443.1| 276|Homo sapiens LYST-interacting protei... 34 0.51
AF092441-1|AAP97216.1| 397|Homo sapiens CBP protein. 34 0.51
X78136-1|CAA55015.1| 365|Homo sapiens hnRNP-E2 protein. 33 0.89
AB208825-1|BAD92062.1| 373|Homo sapiens poly(rC)-binding protei... 33 0.89
BC107688-1|AAI07689.1| 335|Homo sapiens PCBP2 protein protein. 33 1.2
BC071942-1|AAH71942.1| 366|Homo sapiens poly(rC) binding protei... 33 1.2
BC001155-1|AAH01155.1| 362|Homo sapiens poly(rC) binding protei... 33 1.2
AB188306-1|BAD36897.1| 331|Homo sapiens poly(rC) binding protei... 33 1.2
U05040-1|AAA17976.2| 644|Homo sapiens FUSE binding protein prot... 31 2.7
BC065269-1|AAH65269.1| 579|Homo sapiens insulin-like growth fac... 31 2.7
BC017247-1|AAH17247.1| 653|Homo sapiens FUBP1 protein protein. 31 2.7
AF117108-1|AAD09828.1| 579|Homo sapiens IGF-II mRNA-binding pro... 31 2.7
AB209366-1|BAD92603.1| 493|Homo sapiens far upstream element-bi... 31 2.7
U04840-1|AAA16022.1| 510|Homo sapiens onconeural ventral antige... 31 3.6
BC075039-1|AAH75039.1| 507|Homo sapiens neuro-oncological ventr... 31 3.6
BC075038-1|AAH75038.1| 507|Homo sapiens neuro-oncological ventr... 31 3.6
BC013399-1|AAH13399.1| 447|Homo sapiens integrin alpha FG-GAP r... 31 4.7
BC006552-1|AAH06552.1| 447|Homo sapiens integrin alpha FG-GAP r... 31 4.7
AK027483-1|BAB55145.1| 447|Homo sapiens protein ( Homo sapiens ... 31 4.7
X69962-1|CAA49586.1| 632|Homo sapiens protein ( H.sapiens FMR-1... 30 6.3
U69127-1|AAC50893.1| 600|Homo sapiens FUSE binding protein 3 pr... 30 6.3
S65791-1|AAB28395.2| 632|Homo sapiens FMR1 protein. 30 6.3
M67468-1|AAA52458.1| 657|Homo sapiens FMR1 protein. 30 6.3
L29074-6|AAB18829.1| 590|Homo sapiens fragile X mental retardat... 30 6.3
L29074-5|AAB18830.1| 607|Homo sapiens fragile X mental retardat... 30 6.3
L29074-4|AAB18831.1| 603|Homo sapiens fragile X mental retardat... 30 6.3
L29074-3|AAB18828.1| 620|Homo sapiens fragile X mental retardat... 30 6.3
L29074-2|AAB18832.1| 615|Homo sapiens fragile X mental retardat... 30 6.3
L29074-1|AAB18833.1| 632|Homo sapiens fragile X mental retardat... 30 6.3
L19483-1|AAA62459.1| 57|Homo sapiens FMR1 protein. 30 6.3
BC086957-1|AAH86957.1| 586|Homo sapiens FMR1 protein protein. 30 6.3
BC038998-1|AAH38998.1| 297|Homo sapiens FMR1 protein protein. 30 6.3
BC007874-1|AAH07874.1| 261|Homo sapiens FUBP3 protein protein. 30 6.3
AL359092-4|CAM45745.1| 261|Homo sapiens far upstream element (F... 30 6.3
AL359092-2|CAM45743.1| 572|Homo sapiens far upstream element (F... 30 6.3
AL353695-2|CAH70961.1| 261|Homo sapiens far upstream element (F... 30 6.3
AL353695-1|CAH70960.1| 572|Homo sapiens far upstream element (F... 30 6.3
AB209188-1|BAD92425.1| 527|Homo sapiens fragile X mental retard... 30 6.3
U25165-1|AAC50155.1| 621|Homo sapiens FXR1 protein. 30 8.3
BC028983-1|AAH28983.1| 539|Homo sapiens fragile X mental retard... 30 8.3
AY341428-1|AAQ20045.1| 536|Homo sapiens fragile X mental retard... 30 8.3
>X97335-1|CAA66000.1| 903|Homo sapiens kinase A anchor protein
protein.
Length = 903
Score = 47.2 bits (107), Expect = 5e-05
Identities = 21/57 (36%), Positives = 35/57 (61%)
Frame = +2
Query: 83 PTETDLRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQKICAVE 253
P + DL I + + ++LVG LIGK G +V+ +K +GA +Y+ P + +IC +E
Sbjct: 602 PKKVDLIIWEIEVPKHLVGRLIGKQGRYVSFLKQTSGAKIYISTLPYTQSVQICHIE 658
Score = 35.9 bits (79), Expect = 0.13
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 370 PLIPEFLQLQLVESVNNDTILTCLVSAGHFFLQQPLHPTF 489
P +P L L + + + I+ V+AGH F+QQ HPTF
Sbjct: 694 PSLPMTSWLMLPDGITVEVIVVNQVNAGHLFVQQHTHPTF 733
>BC000729-1|AAH00729.1| 903|Homo sapiens A kinase (PRKA) anchor
protein 1 protein.
Length = 903
Score = 47.2 bits (107), Expect = 5e-05
Identities = 21/57 (36%), Positives = 35/57 (61%)
Frame = +2
Query: 83 PTETDLRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQKICAVE 253
P + DL I + + ++LVG LIGK G +V+ +K +GA +Y+ P + +IC +E
Sbjct: 602 PKKVDLIIWEIEVPKHLVGRLIGKQGRYVSFLKQTSGAKIYISTLPYTQSVQICHIE 658
Score = 35.9 bits (79), Expect = 0.13
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 370 PLIPEFLQLQLVESVNNDTILTCLVSAGHFFLQQPLHPTF 489
P +P L L + + + I+ V+AGH F+QQ HPTF
Sbjct: 694 PSLPMTSWLMLPDGITVEVIVVNQVNAGHLFVQQHTHPTF 733
>X78137-1|CAA55016.1| 356|Homo sapiens hnRNP-E1 protein.
Length = 356
Score = 34.3 bits (75), Expect = 0.39
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +2
Query: 107 HQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESS 229
H+ + NL+G +IG+ G+ + +I+ +GA + + E S
Sbjct: 282 HELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGS 322
>X72727-1|CAA51267.1| 464|Homo sapiens transformation upregulated
nuclear protein protein.
Length = 464
Score = 34.3 bits (75), Expect = 0.39
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +2
Query: 110 QFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQKICAV 250
Q + ++L G +IGK G + QI+ ++GAS+ + E S+ +I +
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITI 437
>U97188-1|AAC35208.1| 579|Homo sapiens putative RNA binding protein
KOC protein.
Length = 579
Score = 34.3 bits (75), Expect = 0.39
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +2
Query: 35 GCSEAASPPPASLNIVPTETDLRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYV 208
G A +PP TET +HQF+ + + VG +IGK G + Q+ GAS+ +
Sbjct: 388 GPPSAMTPPYPQFEQSETET---VHQFIPALS-VGAIIGKQGQHIKQLSRFAGASIKI 441
>U76705-1|AAD09223.1| 579|Homo sapiens Koc1 protein.
Length = 579
Score = 34.3 bits (75), Expect = 0.39
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +2
Query: 35 GCSEAASPPPASLNIVPTETDLRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYV 208
G A +PP TET +HQF+ + + VG +IGK G + Q+ GAS+ +
Sbjct: 388 GPPSAMTPPYPQFEQSETET---VHQFIPALS-VGAIIGKQGQHIKQLSRFAGASIKI 441
>U24223-1|AAA91317.1| 356|Homo sapiens alpha-CP1 protein.
Length = 356
Score = 34.3 bits (75), Expect = 0.39
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +2
Query: 107 HQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESS 229
H+ + NL+G +IG+ G+ + +I+ +GA + + E S
Sbjct: 282 HELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGS 322
>S74678-1|AAB20770.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein complex K protein.
Length = 463
Score = 34.3 bits (75), Expect = 0.39
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +2
Query: 110 QFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQKICAV 250
Q + ++L G +IGK G + QI+ ++GAS+ + E S+ +I +
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITI 437
>CR456771-1|CAG33052.1| 464|Homo sapiens HNRPK protein.
Length = 464
Score = 34.3 bits (75), Expect = 0.39
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +2
Query: 110 QFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQKICAV 250
Q + ++L G +IGK G + QI+ ++GAS+ + E S+ +I +
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITI 437
>BC039742-1|AAH39742.1| 356|Homo sapiens poly(rC) binding protein 1
protein.
Length = 356
Score = 34.3 bits (75), Expect = 0.39
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +2
Query: 107 HQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESS 229
H+ + NL+G +IG+ G+ + +I+ +GA + + E S
Sbjct: 282 HELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGS 322
>BC014980-1|AAH14980.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 463
Score = 34.3 bits (75), Expect = 0.39
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +2
Query: 110 QFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQKICAV 250
Q + ++L G +IGK G + QI+ ++GAS+ + E S+ +I +
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITI 437
>BC012061-1|AAH12061.1| 313|Homo sapiens PCBP3 protein protein.
Length = 313
Score = 34.3 bits (75), Expect = 0.39
Identities = 11/44 (25%), Positives = 26/44 (59%)
Frame = +2
Query: 107 HQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQK 238
H+ + +L+G +IG+ G+ + +I+ +GA + + E S ++
Sbjct: 238 HELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSER 281
>BC000355-1|AAH00355.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 464
Score = 34.3 bits (75), Expect = 0.39
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +2
Query: 110 QFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQKICAV 250
Q + ++L G +IGK G + QI+ ++GAS+ + E S+ +I +
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITI 437
>AY911506-1|AAW84289.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K transcript variant protein.
Length = 464
Score = 34.3 bits (75), Expect = 0.39
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +2
Query: 110 QFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQKICAV 250
Q + ++L G +IGK G + QI+ ++GAS+ + E S+ +I +
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITI 437
>AY780793-1|AAV98363.1| 361|Homo sapiens poly(rC) binding protein 3
protein.
Length = 361
Score = 34.3 bits (75), Expect = 0.39
Identities = 11/44 (25%), Positives = 26/44 (59%)
Frame = +2
Query: 107 HQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQK 238
H+ + +L+G +IG+ G+ + +I+ +GA + + E S ++
Sbjct: 286 HELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSER 329
>AL354733-11|CAI16021.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 464
Score = 34.3 bits (75), Expect = 0.39
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +2
Query: 110 QFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQKICAV 250
Q + ++L G +IGK G + QI+ ++GAS+ + E S+ +I +
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITI 437
>AL354733-10|CAI16020.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 463
Score = 34.3 bits (75), Expect = 0.39
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +2
Query: 110 QFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQKICAV 250
Q + ++L G +IGK G + QI+ ++GAS+ + E S+ +I +
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITI 437
>AL354733-9|CAI16019.1| 428|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 428
Score = 34.3 bits (75), Expect = 0.39
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +2
Query: 110 QFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQKICAV 250
Q + ++L G +IGK G + QI+ ++GAS+ + E S+ +I +
Sbjct: 356 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITI 402
>AK094301-1|BAC04327.1| 351|Homo sapiens protein ( Homo sapiens
cDNA FLJ36982 fis, clone BRACE2006488, highly similar to
POLY(RC) BINDING PROTEIN 2. ).
Length = 351
Score = 34.3 bits (75), Expect = 0.39
Identities = 11/44 (25%), Positives = 26/44 (59%)
Frame = +2
Query: 107 HQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQK 238
H+ + +L+G +IG+ G+ + +I+ +GA + + E S ++
Sbjct: 276 HELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSER 319
>AF176329-1|AAG09240.1| 339|Homo sapiens alphaCP-3 protein.
Length = 339
Score = 34.3 bits (75), Expect = 0.39
Identities = 11/44 (25%), Positives = 26/44 (59%)
Frame = +2
Query: 107 HQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQK 238
H+ + +L+G +IG+ G+ + +I+ +GA + + E S ++
Sbjct: 264 HELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSER 307
>AC016700-1|AAX93191.1| 356|Homo sapiens unknown protein.
Length = 356
Score = 34.3 bits (75), Expect = 0.39
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +2
Query: 107 HQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESS 229
H+ + NL+G +IG+ G+ + +I+ +GA + + E S
Sbjct: 282 HELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGS 322
>AB209562-1|BAD92799.1| 442|Homo sapiens heterogeneous nuclear
ribonucleoprotein K isoform a variant protein.
Length = 442
Score = 34.3 bits (75), Expect = 0.39
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +2
Query: 110 QFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQKICAV 250
Q + ++L G +IGK G + QI+ ++GAS+ + E S+ +I +
Sbjct: 369 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITI 415
>BC017098-1|AAH17098.1| 360|Homo sapiens PCBP4 protein protein.
Length = 360
Score = 33.9 bits (74), Expect = 0.51
Identities = 16/63 (25%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Frame = +2
Query: 59 PPASLNIVP---TETDLRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESS 229
P A+ ++VP T +F++ +L+G +IG+ GS +++I+ +GA + + E +
Sbjct: 182 PFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGA 241
Query: 230 KQK 238
++
Sbjct: 242 GER 244
>BC004153-1|AAH04153.1| 403|Homo sapiens poly(rC) binding protein 4
protein.
Length = 403
Score = 33.9 bits (74), Expect = 0.51
Identities = 16/63 (25%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Frame = +2
Query: 59 PPASLNIVP---TETDLRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESS 229
P A+ ++VP T +F++ +L+G +IG+ GS +++I+ +GA + + E +
Sbjct: 225 PFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGA 284
Query: 230 KQK 238
++
Sbjct: 285 GER 287
>BC003008-1|AAH03008.1| 403|Homo sapiens poly(rC) binding protein 4
protein.
Length = 403
Score = 33.9 bits (74), Expect = 0.51
Identities = 16/63 (25%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Frame = +2
Query: 59 PPASLNIVP---TETDLRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESS 229
P A+ ++VP T +F++ +L+G +IG+ GS +++I+ +GA + + E +
Sbjct: 225 PFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGA 284
Query: 230 KQK 238
++
Sbjct: 285 GER 287
>AK023993-1|BAB14761.1| 403|Homo sapiens protein ( Homo sapiens
cDNA FLJ13931 fis, clone Y79AA1000752, moderately
similar to PUTATIVE HETEROGENEOUS NUCLEAR
RIBONUCLEOPROTEIN X. ).
Length = 403
Score = 33.9 bits (74), Expect = 0.51
Identities = 16/63 (25%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Frame = +2
Query: 59 PPASLNIVP---TETDLRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESS 229
P A+ ++VP T +F++ +L+G +IG+ GS +++I+ +GA + + E +
Sbjct: 225 PFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGA 284
Query: 230 KQK 238
++
Sbjct: 285 GER 287
>AF257772-1|AAG02186.1| 424|Homo sapiens RNA binding protein MCG10
protein.
Length = 424
Score = 33.9 bits (74), Expect = 0.51
Identities = 16/63 (25%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Frame = +2
Query: 59 PPASLNIVP---TETDLRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESS 229
P A+ ++VP T +F++ +L+G +IG+ GS +++I+ +GA + + E +
Sbjct: 246 PFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGA 305
Query: 230 KQK 238
++
Sbjct: 306 GER 308
>AF257771-1|AAG02185.1| 369|Homo sapiens RNA binding protein MCG10
protein.
Length = 369
Score = 33.9 bits (74), Expect = 0.51
Identities = 16/63 (25%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Frame = +2
Query: 59 PPASLNIVP---TETDLRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESS 229
P A+ ++VP T +F++ +L+G +IG+ GS +++I+ +GA + + E +
Sbjct: 191 PFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGA 250
Query: 230 KQK 238
++
Sbjct: 251 GER 253
>AF257770-1|AAG02184.1| 424|Homo sapiens RNA binding protein MCG10
protein.
Length = 424
Score = 33.9 bits (74), Expect = 0.51
Identities = 16/63 (25%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Frame = +2
Query: 59 PPASLNIVP---TETDLRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESS 229
P A+ ++VP T +F++ +L+G +IG+ GS +++I+ +GA + + E +
Sbjct: 246 PFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGA 305
Query: 230 KQK 238
++
Sbjct: 306 GER 308
>AF176330-1|AAG09241.1| 403|Homo sapiens alphaCP-4 protein.
Length = 403
Score = 33.9 bits (74), Expect = 0.51
Identities = 16/63 (25%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Frame = +2
Query: 59 PPASLNIVP---TETDLRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESS 229
P A+ ++VP T +F++ +L+G +IG+ GS +++I+ +GA + + E +
Sbjct: 225 PFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGA 284
Query: 230 KQK 238
++
Sbjct: 285 GER 287
>AF141340-1|AAG49443.1| 276|Homo sapiens LYST-interacting protein
LIP4 protein.
Length = 276
Score = 33.9 bits (74), Expect = 0.51
Identities = 16/63 (25%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Frame = +2
Query: 59 PPASLNIVP---TETDLRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESS 229
P A+ ++VP T +F++ +L+G +IG+ GS +++I+ +GA + + E +
Sbjct: 68 PFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGA 127
Query: 230 KQK 238
++
Sbjct: 128 GER 130
>AF092441-1|AAP97216.1| 397|Homo sapiens CBP protein.
Length = 397
Score = 33.9 bits (74), Expect = 0.51
Identities = 16/63 (25%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Frame = +2
Query: 59 PPASLNIVP---TETDLRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESS 229
P A+ ++VP T +F++ +L+G +IG+ GS +++I+ +GA + + E +
Sbjct: 225 PFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGA 284
Query: 230 KQK 238
++
Sbjct: 285 GER 287
>X78136-1|CAA55015.1| 365|Homo sapiens hnRNP-E2 protein.
Length = 365
Score = 33.1 bits (72), Expect = 0.89
Identities = 14/65 (21%), Positives = 31/65 (47%)
Frame = +2
Query: 44 EAASPPPASLNIVPTETDLRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPE 223
E++SP + H+ + +L+G +IG+ G+ + +I+ +GA + + E
Sbjct: 269 ESSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE 328
Query: 224 SSKQK 238
S +
Sbjct: 329 GSTDR 333
>AB208825-1|BAD92062.1| 373|Homo sapiens poly(rC)-binding protein 2
isoform b variant protein.
Length = 373
Score = 33.1 bits (72), Expect = 0.89
Identities = 14/65 (21%), Positives = 31/65 (47%)
Frame = +2
Query: 44 EAASPPPASLNIVPTETDLRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPE 223
E++SP + H+ + +L+G +IG+ G+ + +I+ +GA + + E
Sbjct: 277 ESSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE 336
Query: 224 SSKQK 238
S +
Sbjct: 337 GSTDR 341
>BC107688-1|AAI07689.1| 335|Homo sapiens PCBP2 protein protein.
Length = 335
Score = 32.7 bits (71), Expect = 1.2
Identities = 11/44 (25%), Positives = 25/44 (56%)
Frame = +2
Query: 107 HQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQK 238
H+ + +L+G +IG+ G+ + +I+ +GA + + E S +
Sbjct: 260 HELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDR 303
>BC071942-1|AAH71942.1| 366|Homo sapiens poly(rC) binding protein 2
protein.
Length = 366
Score = 32.7 bits (71), Expect = 1.2
Identities = 11/44 (25%), Positives = 25/44 (56%)
Frame = +2
Query: 107 HQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQK 238
H+ + +L+G +IG+ G+ + +I+ +GA + + E S +
Sbjct: 291 HELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDR 334
>BC001155-1|AAH01155.1| 362|Homo sapiens poly(rC) binding protein 2
protein.
Length = 362
Score = 32.7 bits (71), Expect = 1.2
Identities = 11/44 (25%), Positives = 25/44 (56%)
Frame = +2
Query: 107 HQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQK 238
H+ + +L+G +IG+ G+ + +I+ +GA + + E S +
Sbjct: 287 HELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDR 330
>AB188306-1|BAD36897.1| 331|Homo sapiens poly(rC) binding protein 2
protein.
Length = 331
Score = 32.7 bits (71), Expect = 1.2
Identities = 11/44 (25%), Positives = 25/44 (56%)
Frame = +2
Query: 107 HQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQK 238
H+ + +L+G +IG+ G+ + +I+ +GA + + E S +
Sbjct: 256 HELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDR 299
>U05040-1|AAA17976.2| 644|Homo sapiens FUSE binding protein
protein.
Length = 644
Score = 31.5 bits (68), Expect = 2.7
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +2
Query: 98 LRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHP 220
L+ F++ GL+IGK G + I ++GA + ++R+P
Sbjct: 376 LQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNP 416
>BC065269-1|AAH65269.1| 579|Homo sapiens insulin-like growth factor
2 mRNA binding protein 3 protein.
Length = 579
Score = 31.5 bits (68), Expect = 2.7
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +2
Query: 35 GCSEAASPPPASLNIVPTETDLRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYV 208
G A +PP TET +H F+ + + VG +IGK G + Q+ GAS+ +
Sbjct: 388 GPPSAMTPPYPQFEQSETET---VHLFIPALS-VGAIIGKQGQHIKQLSRFAGASIKI 441
>BC017247-1|AAH17247.1| 653|Homo sapiens FUBP1 protein protein.
Length = 653
Score = 31.5 bits (68), Expect = 2.7
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +2
Query: 98 LRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHP 220
L+ F++ GL+IGK G + I ++GA + ++R+P
Sbjct: 375 LQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNP 415
>AF117108-1|AAD09828.1| 579|Homo sapiens IGF-II mRNA-binding
protein 3 protein.
Length = 579
Score = 31.5 bits (68), Expect = 2.7
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +2
Query: 35 GCSEAASPPPASLNIVPTETDLRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYV 208
G A +PP TET +H F+ + + VG +IGK G + Q+ GAS+ +
Sbjct: 388 GPPSAMTPPYPQFEQSETET---VHLFIPALS-VGAIIGKQGQHIKQLSRFAGASIKI 441
>AB209366-1|BAD92603.1| 493|Homo sapiens far upstream
element-binding protein variant protein.
Length = 493
Score = 31.5 bits (68), Expect = 2.7
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +2
Query: 98 LRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHP 220
L+ F++ GL+IGK G + I ++GA + ++R+P
Sbjct: 226 LQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNP 266
>U04840-1|AAA16022.1| 510|Homo sapiens onconeural ventral antigen-1
protein.
Length = 510
Score = 31.1 bits (67), Expect = 3.6
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = +2
Query: 47 AASPPPASLNIVPTE--TD--LRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRR 214
AASP AS I+ TE TD + + + +NLVG ++GK G + + + TGA + + +
Sbjct: 404 AASPLAASA-ILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISK 462
Query: 215 HPE 223
E
Sbjct: 463 KGE 465
>BC075039-1|AAH75039.1| 507|Homo sapiens neuro-oncological ventral
antigen 1 protein.
Length = 507
Score = 31.1 bits (67), Expect = 3.6
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = +2
Query: 47 AASPPPASLNIVPTE--TD--LRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRR 214
AASP AS I+ TE TD + + + +NLVG ++GK G + + + TGA + + +
Sbjct: 401 AASPLAASA-ILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISK 459
Query: 215 HPE 223
E
Sbjct: 460 KGE 462
>BC075038-1|AAH75038.1| 507|Homo sapiens neuro-oncological ventral
antigen 1 protein.
Length = 507
Score = 31.1 bits (67), Expect = 3.6
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = +2
Query: 47 AASPPPASLNIVPTE--TD--LRIHQFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRR 214
AASP AS I+ TE TD + + + +NLVG ++GK G + + + TGA + + +
Sbjct: 401 AASPLAASA-ILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISK 459
Query: 215 HPE 223
E
Sbjct: 460 KGE 462
>BC013399-1|AAH13399.1| 447|Homo sapiens integrin alpha FG-GAP
repeat containing 2 protein.
Length = 447
Score = 30.7 bits (66), Expect = 4.7
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +2
Query: 14 GSSDSGKGCSEAASPPPASLNIVPTETDLRIHQFVLSQNLVGLLIGKHGS 163
GS + +G ++ + PA+ ++V +T RIH +S +L+G + HG+
Sbjct: 219 GSPPASEGPTDGSRETPAARDVVLHQTSGRIHNKNVSTHLIGNIKQGHGT 268
>BC006552-1|AAH06552.1| 447|Homo sapiens integrin alpha FG-GAP
repeat containing 2 protein.
Length = 447
Score = 30.7 bits (66), Expect = 4.7
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +2
Query: 14 GSSDSGKGCSEAASPPPASLNIVPTETDLRIHQFVLSQNLVGLLIGKHGS 163
GS + +G ++ + PA+ ++V +T RIH +S +L+G + HG+
Sbjct: 219 GSPPASEGPTDGSRETPAARDVVLHQTSGRIHNKNVSTHLIGNIKQGHGT 268
>AK027483-1|BAB55145.1| 447|Homo sapiens protein ( Homo sapiens
cDNA FLJ14577 fis, clone NT2RM4001155, moderately
similar to ADRENAL MEDULLA 50 KD PROTEIN. ).
Length = 447
Score = 30.7 bits (66), Expect = 4.7
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +2
Query: 14 GSSDSGKGCSEAASPPPASLNIVPTETDLRIHQFVLSQNLVGLLIGKHGS 163
GS + +G ++ + PA+ ++V +T RIH +S +L+G + HG+
Sbjct: 219 GSPPASEGPTDGSRETPAARDVVLHQTSGRIHNKNVSTHLIGNIKQGHGT 268
>X69962-1|CAA49586.1| 632|Homo sapiens protein ( H.sapiens FMR-1
mRNA. ).
Length = 632
Score = 30.3 bits (65), Expect = 6.3
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 101 RIH-QFVLSQNLVGLLIGKHGSFVTQIKAKTGAS 199
R H QF++ ++L+GL IG HG+ + Q + G +
Sbjct: 218 RFHEQFIVREDLMGLAIGTHGANIQQARKVPGVT 251
Score = 30.3 bits (65), Expect = 6.3
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2
Query: 125 QNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSK 232
+NLVG +IGK+G + +I K+G V VR E+ K
Sbjct: 290 RNLVGKVIGKNGKLIQEIVDKSGV-VRVRIEAENEK 324
>U69127-1|AAC50893.1| 600|Homo sapiens FUSE binding protein 3
protein.
Length = 600
Score = 30.3 bits (65), Expect = 6.3
Identities = 10/47 (21%), Positives = 26/47 (55%)
Frame = +2
Query: 110 QFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQKICAV 250
+F + +VG +IG+ G +++I+A++G + + ++ C +
Sbjct: 109 EFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVL 155
>S65791-1|AAB28395.2| 632|Homo sapiens FMR1 protein.
Length = 632
Score = 30.3 bits (65), Expect = 6.3
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 101 RIH-QFVLSQNLVGLLIGKHGSFVTQIKAKTGAS 199
R H QF++ ++L+GL IG HG+ + Q + G +
Sbjct: 218 RFHEQFIVREDLMGLAIGTHGANIQQARKVPGVT 251
Score = 30.3 bits (65), Expect = 6.3
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2
Query: 125 QNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSK 232
+NLVG +IGK+G + +I K+G V VR E+ K
Sbjct: 290 RNLVGKVIGKNGKLIQEIVDKSGV-VRVRIEAENEK 324
>M67468-1|AAA52458.1| 657|Homo sapiens FMR1 protein.
Length = 657
Score = 30.3 bits (65), Expect = 6.3
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 101 RIH-QFVLSQNLVGLLIGKHGSFVTQIKAKTGAS 199
R H QF++ ++L+GL IG HG+ + Q + G +
Sbjct: 283 RFHEQFIVREDLMGLAIGTHGANIQQARKVPGVT 316
>L29074-6|AAB18829.1| 590|Homo sapiens fragile X mental retardation
syndrome protein protein.
Length = 590
Score = 30.3 bits (65), Expect = 6.3
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 101 RIH-QFVLSQNLVGLLIGKHGSFVTQIKAKTGAS 199
R H QF++ ++L+GL IG HG+ + Q + G +
Sbjct: 218 RFHEQFIVREDLMGLAIGTHGANIQQARKVPGVT 251
Score = 30.3 bits (65), Expect = 6.3
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2
Query: 125 QNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSK 232
+NLVG +IGK+G + +I K+G V VR E+ K
Sbjct: 290 RNLVGKVIGKNGKLIQEIVDKSGV-VRVRIEAENEK 324
>L29074-5|AAB18830.1| 607|Homo sapiens fragile X mental retardation
syndrome protein protein.
Length = 607
Score = 30.3 bits (65), Expect = 6.3
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 101 RIH-QFVLSQNLVGLLIGKHGSFVTQIKAKTGAS 199
R H QF++ ++L+GL IG HG+ + Q + G +
Sbjct: 218 RFHEQFIVREDLMGLAIGTHGANIQQARKVPGVT 251
Score = 30.3 bits (65), Expect = 6.3
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2
Query: 125 QNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSK 232
+NLVG +IGK+G + +I K+G V VR E+ K
Sbjct: 290 RNLVGKVIGKNGKLIQEIVDKSGV-VRVRIEAENEK 324
>L29074-4|AAB18831.1| 603|Homo sapiens fragile X mental retardation
syndrome protein protein.
Length = 603
Score = 30.3 bits (65), Expect = 6.3
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 101 RIH-QFVLSQNLVGLLIGKHGSFVTQIKAKTGAS 199
R H QF++ ++L+GL IG HG+ + Q + G +
Sbjct: 218 RFHEQFIVREDLMGLAIGTHGANIQQARKVPGVT 251
Score = 30.3 bits (65), Expect = 6.3
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2
Query: 125 QNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSK 232
+NLVG +IGK+G + +I K+G V VR E+ K
Sbjct: 290 RNLVGKVIGKNGKLIQEIVDKSGV-VRVRIEAENEK 324
>L29074-3|AAB18828.1| 620|Homo sapiens fragile X mental retardation
syndrome protein protein.
Length = 620
Score = 30.3 bits (65), Expect = 6.3
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 101 RIH-QFVLSQNLVGLLIGKHGSFVTQIKAKTGAS 199
R H QF++ ++L+GL IG HG+ + Q + G +
Sbjct: 218 RFHEQFIVREDLMGLAIGTHGANIQQARKVPGVT 251
Score = 30.3 bits (65), Expect = 6.3
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2
Query: 125 QNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSK 232
+NLVG +IGK+G + +I K+G V VR E+ K
Sbjct: 290 RNLVGKVIGKNGKLIQEIVDKSGV-VRVRIEAENEK 324
>L29074-2|AAB18832.1| 615|Homo sapiens fragile X mental retardation
syndrome protein protein.
Length = 615
Score = 30.3 bits (65), Expect = 6.3
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 101 RIH-QFVLSQNLVGLLIGKHGSFVTQIKAKTGAS 199
R H QF++ ++L+GL IG HG+ + Q + G +
Sbjct: 218 RFHEQFIVREDLMGLAIGTHGANIQQARKVPGVT 251
Score = 30.3 bits (65), Expect = 6.3
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2
Query: 125 QNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSK 232
+NLVG +IGK+G + +I K+G V VR E+ K
Sbjct: 290 RNLVGKVIGKNGKLIQEIVDKSGV-VRVRIEAENEK 324
>L29074-1|AAB18833.1| 632|Homo sapiens fragile X mental retardation
syndrome protein protein.
Length = 632
Score = 30.3 bits (65), Expect = 6.3
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 101 RIH-QFVLSQNLVGLLIGKHGSFVTQIKAKTGAS 199
R H QF++ ++L+GL IG HG+ + Q + G +
Sbjct: 218 RFHEQFIVREDLMGLAIGTHGANIQQARKVPGVT 251
Score = 30.3 bits (65), Expect = 6.3
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2
Query: 125 QNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSK 232
+NLVG +IGK+G + +I K+G V VR E+ K
Sbjct: 290 RNLVGKVIGKNGKLIQEIVDKSGV-VRVRIEAENEK 324
>L19483-1|AAA62459.1| 57|Homo sapiens FMR1 protein.
Length = 57
Score = 30.3 bits (65), Expect = 6.3
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 101 RIH-QFVLSQNLVGLLIGKHGSFVTQIKAKTGAS 199
R H QF++ ++L+GL IG HG+ + Q + G +
Sbjct: 8 RFHEQFIVREDLMGLAIGTHGANIQQARKVPGVT 41
>BC086957-1|AAH86957.1| 586|Homo sapiens FMR1 protein protein.
Length = 586
Score = 30.3 bits (65), Expect = 6.3
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 101 RIH-QFVLSQNLVGLLIGKHGSFVTQIKAKTGAS 199
R H QF++ ++L+GL IG HG+ + Q + G +
Sbjct: 218 RFHEQFIVREDLMGLAIGTHGANIQQARKVPGVT 251
Score = 30.3 bits (65), Expect = 6.3
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2
Query: 125 QNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSK 232
+NLVG +IGK+G + +I K+G V VR E+ K
Sbjct: 290 RNLVGKVIGKNGKLIQEIVDKSGV-VRVRIEAENEK 324
>BC038998-1|AAH38998.1| 297|Homo sapiens FMR1 protein protein.
Length = 297
Score = 30.3 bits (65), Expect = 6.3
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 101 RIH-QFVLSQNLVGLLIGKHGSFVTQIKAKTGAS 199
R H QF++ ++L+GL IG HG+ + Q + G +
Sbjct: 218 RFHEQFIVREDLMGLAIGTHGANIQQARKVPGVT 251
>BC007874-1|AAH07874.1| 261|Homo sapiens FUBP3 protein protein.
Length = 261
Score = 30.3 bits (65), Expect = 6.3
Identities = 10/47 (21%), Positives = 26/47 (55%)
Frame = +2
Query: 110 QFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQKICAV 250
+F + +VG +IG+ G +++I+A++G + + ++ C +
Sbjct: 21 EFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVL 67
>AL359092-4|CAM45745.1| 261|Homo sapiens far upstream element
(FUSE) binding protein 3 protein.
Length = 261
Score = 30.3 bits (65), Expect = 6.3
Identities = 10/47 (21%), Positives = 26/47 (55%)
Frame = +2
Query: 110 QFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQKICAV 250
+F + +VG +IG+ G +++I+A++G + + ++ C +
Sbjct: 21 EFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVL 67
>AL359092-2|CAM45743.1| 572|Homo sapiens far upstream element
(FUSE) binding protein 3 protein.
Length = 572
Score = 30.3 bits (65), Expect = 6.3
Identities = 10/47 (21%), Positives = 26/47 (55%)
Frame = +2
Query: 110 QFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQKICAV 250
+F + +VG +IG+ G +++I+A++G + + ++ C +
Sbjct: 81 EFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVL 127
>AL353695-2|CAH70961.1| 261|Homo sapiens far upstream element
(FUSE) binding protein 3 protein.
Length = 261
Score = 30.3 bits (65), Expect = 6.3
Identities = 10/47 (21%), Positives = 26/47 (55%)
Frame = +2
Query: 110 QFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQKICAV 250
+F + +VG +IG+ G +++I+A++G + + ++ C +
Sbjct: 21 EFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVL 67
>AL353695-1|CAH70960.1| 572|Homo sapiens far upstream element
(FUSE) binding protein 3 protein.
Length = 572
Score = 30.3 bits (65), Expect = 6.3
Identities = 10/47 (21%), Positives = 26/47 (55%)
Frame = +2
Query: 110 QFVLSQNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSKQKICAV 250
+F + +VG +IG+ G +++I+A++G + + ++ C +
Sbjct: 81 EFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVL 127
>AB209188-1|BAD92425.1| 527|Homo sapiens fragile X mental
retardation 1 variant protein.
Length = 527
Score = 30.3 bits (65), Expect = 6.3
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 101 RIH-QFVLSQNLVGLLIGKHGSFVTQIKAKTGAS 199
R H QF++ ++L+GL IG HG+ + Q + G +
Sbjct: 134 RFHEQFIVREDLMGLAIGTHGANIQQARKVPGVT 167
Score = 30.3 bits (65), Expect = 6.3
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2
Query: 125 QNLVGLLIGKHGSFVTQIKAKTGASVYVRRHPESSK 232
+NLVG +IGK+G + +I K+G V VR E+ K
Sbjct: 206 RNLVGKVIGKNGKLIQEIVDKSGV-VRVRIEAENEK 240
>U25165-1|AAC50155.1| 621|Homo sapiens FXR1 protein.
Length = 621
Score = 29.9 bits (64), Expect = 8.3
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 110 QFVLSQNLVGLLIGKHGSFVTQIKAKTGAS 199
+FV+ ++L+GL IG HGS + Q + G +
Sbjct: 222 EFVVREDLMGLAIGTHGSNIQQARKVPGVT 251
>BC028983-1|AAH28983.1| 539|Homo sapiens fragile X mental
retardation, autosomal homolog 1 protein.
Length = 539
Score = 29.9 bits (64), Expect = 8.3
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 110 QFVLSQNLVGLLIGKHGSFVTQIKAKTGAS 199
+FV+ ++L+GL IG HGS + Q + G +
Sbjct: 222 EFVVREDLMGLAIGTHGSNIQQARKVPGVT 251
>AY341428-1|AAQ20045.1| 536|Homo sapiens fragile X mental
retardation autosomal homolog 1-like protein protein.
Length = 536
Score = 29.9 bits (64), Expect = 8.3
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 110 QFVLSQNLVGLLIGKHGSFVTQIKAKTGAS 199
+FV+ ++L+GL IG HGS + Q + G +
Sbjct: 137 EFVVREDLMGLAIGTHGSNIQQARKVPGVT 166
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,939,741
Number of Sequences: 237096
Number of extensions: 1895504
Number of successful extensions: 5251
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 4978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5251
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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