Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0227
         (654 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein ...    24   1.1  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    24   1.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    24   1.5  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   3.4  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   4.5  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   4.5  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     21   7.9  

>DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein 5
           protein.
          Length = 104

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +1

Query: 499 RASRLWPHVQNPVCRRCTPREKG 567
           +   L P V N  C RCT R+ G
Sbjct: 52  KIKELLPEVLNNHCNRCTSRQIG 74


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 452  GTSSFSSPCTPRFRADVLHGYGRTSRTPCAVVARPV 559
            GTSS SS  +P      L   GR+SR+    +  P+
Sbjct: 1821 GTSSTSSDISPMSEQKSLPRRGRSSRSSLRTLLPPI 1856


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 452  GTSSFSSPCTPRFRADVLHGYGRTSRTPCAVVARPV 559
            GTSS SS  +P      L   GR+SR+    +  P+
Sbjct: 1817 GTSSTSSDISPMSEQKSLPRRGRSSRSSLRTLLPPI 1852


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +3

Query: 423 HDIDVSGECGALLPSAAPAPHVSALTCFTAMAARPE 530
           H+  + GE     P+A+P+P     +  T  A  P+
Sbjct: 728 HNYIMRGEASPRSPNASPSPAEQCASTTTITARSPQ 763


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -2

Query: 461 KKCPALTRHVNIVSLFTDSTNCNCKN 384
           +K  A T H+N++  F D  N N ++
Sbjct: 138 RKLIAPTFHLNVLKSFIDLFNANARS 163


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -2

Query: 410 DSTNCNC 390
           DSTNCNC
Sbjct: 147 DSTNCNC 153


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 256 FFNCTYFLFGRFRMPSD 206
           + N  YFLFG F   +D
Sbjct: 218 YSNVPYFLFGDFNFRTD 234


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,086
Number of Sequences: 438
Number of extensions: 3597
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)