Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0215
         (666 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   6.5  
DQ212034-1|ABB00979.1|  102|Anopheles gambiae defensin protein.        23   8.7  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    23   8.7  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 258 KRCTRRGFQEVL*QECS 308
           K+CT  GF E   QEC+
Sbjct: 644 KKCTGYGFHEQFCQECT 660


>DQ212034-1|ABB00979.1|  102|Anopheles gambiae defensin protein.
          Length = 102

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
 Frame = +2

Query: 116 AVVTSQCTKNNAEDKVPEVEAALRTFGNCLKGLVDLNVLKTEIEEASQ--TVHSTRFSRS 289
           AVV +    N +    P+ EAAL   GN       LN L  E+ E +    + + R  R+
Sbjct: 11  AVVLAATLLNGSVQAAPQEEAALSGGGN-------LNTLLDELPEETHHAALENYRAKRA 63

Query: 290 TVTRVLN*KAVSARCCRACV 349
           T          S+ C   C+
Sbjct: 64  TCDLASGFGVGSSLCAAHCI 83


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -1

Query: 408 SXWXXLGIIDVVRIFVAYTRTHALQHRADTAFQLS 304
           S W     +DV R FV Y  T  L     +A+++S
Sbjct: 357 SLWGPKSELDVARGFVGYNAT-VLMENMQSAYRVS 390


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 681,839
Number of Sequences: 2352
Number of extensions: 13659
Number of successful extensions: 26
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)