Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0214
         (660 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    26   0.24 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    25   0.73 
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    24   1.3  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    23   2.9  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   6.8  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   9.0  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   9.0  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   9.0  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   9.0  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   9.0  

>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +2

Query: 152 PPITRCCLETKKTAKSPRT 208
           PPI RC L   K  + PRT
Sbjct: 102 PPIVRCALRKHKPNRKPRT 120


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 24.6 bits (51), Expect = 0.73
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 88  YCKAE*GVLAPVPCPSRGTCTRRHA 14
           +C+++    A  PC + G CT  HA
Sbjct: 334 HCESKVNFCATSPCQNGGVCTTIHA 358



 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -3

Query: 91  AYCKAE*GVLAPVPCPSRGTC 29
           +YC+ E       PC + GTC
Sbjct: 179 SYCQTEINECDSAPCQNGGTC 199


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = +2

Query: 104 GTKCPADHRCRHYHSLPPITRCCLETKKTAKSPRTNPLRS 223
           GT  P++   RH       TR    +  T  +PRT P  S
Sbjct: 261 GTSSPSNRFTRHLIQRRTHTRHTTTSHNTRGTPRTTPASS 300


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 15/47 (31%), Positives = 19/47 (40%)
 Frame = +2

Query: 125 HRCRHYHSLPPITRCCLETKKTAKSPRTNPLRSLDRSGRRPTSHPRK 265
           H CR   SLPP  +   + KK      T   +S   S     +H RK
Sbjct: 313 HFCRTLGSLPPF-KWLFKKKKRRNRESTTNTQSSSLSEFLTNTHKRK 358


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +2

Query: 17  VPASTSTAAGARNWRQNTSLSFTISKSSCGTKC 115
           V  S  T  GAR+  +  S    +  ++ GTKC
Sbjct: 168 VQISAPTIFGARHGLETLSQLMDVYPNNDGTKC 200


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -3

Query: 91  AYCKAE*GVLAPVPCPSRGTCTRRHA 14
           A C       +P PC + G+C  R A
Sbjct: 101 ALCNINTDDCSPNPCRNNGSCVDRIA 126


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 427 ADPAPRISSMRPTDTTRDHQ 486
           AD  P I +M   DT+R+H+
Sbjct: 445 ADDVPYIFNMGLFDTSRNHR 464


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 427 ADPAPRISSMRPTDTTRDHQ 486
           AD  P I +M   DT+R+H+
Sbjct: 445 ADDVPYIFNMGLFDTSRNHR 464


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 427 ADPAPRISSMRPTDTTRDHQ 486
           AD  P I +M   DT+R+H+
Sbjct: 445 ADDVPYIFNMGLFDTSRNHR 464


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 427 ADPAPRISSMRPTDTTRDHQ 486
           AD  P I +M   DT+R+H+
Sbjct: 445 ADDVPYIFNMGLFDTSRNHR 464


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,314
Number of Sequences: 336
Number of extensions: 2789
Number of successful extensions: 18
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)