Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0214
(660 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT003275-1|AAO25032.1| 772|Drosophila melanogaster LD14577p pro... 56 6e-08
AE014297-661|AAN13384.1| 537|Drosophila melanogaster CG17816-PC... 56 6e-08
AE014297-660|AAF54155.1| 537|Drosophila melanogaster CG17816-PA... 56 6e-08
AE014297-659|AAN13383.1| 878|Drosophila melanogaster CG17816-PB... 56 6e-08
AE014297-658|AAS65123.2| 772|Drosophila melanogaster CG17816-PD... 56 6e-08
AF160940-1|AAD46880.1| 1260|Drosophila melanogaster BcDNA.LD1916... 32 0.79
AE014297-55|AAF52146.1| 1260|Drosophila melanogaster CG9776-PA, ... 32 0.79
AY075409-1|AAL68234.1| 336|Drosophila melanogaster LD33329p pro... 30 2.4
AE014297-3829|AAN14061.1| 336|Drosophila melanogaster CG17383-P... 30 2.4
AE014297-3828|AAN14060.1| 336|Drosophila melanogaster CG17383-P... 30 2.4
AE014297-3827|AAF56485.1| 336|Drosophila melanogaster CG17383-P... 30 2.4
AE014297-3826|AAF56484.1| 336|Drosophila melanogaster CG17383-P... 30 2.4
AE014298-734|AAF46030.2| 573|Drosophila melanogaster CG10706-PE... 29 4.2
AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA... 29 4.2
L08811-1|AAA79329.2| 3503|Drosophila melanogaster adherin protein. 29 5.6
BT024409-1|ABC86471.1| 821|Drosophila melanogaster IP03940p pro... 29 5.6
AF181652-1|AAD55437.1| 819|Drosophila melanogaster BcDNA.LD2358... 29 5.6
AE014298-2132|AAF48444.1| 434|Drosophila melanogaster CG9123-PA... 29 5.6
AE014297-3378|AAF56178.1| 819|Drosophila melanogaster CG10221-P... 29 5.6
AE014134-139|AAF51468.3| 3556|Drosophila melanogaster CG17941-PA... 29 5.6
BT003301-1|AAO25061.1| 348|Drosophila melanogaster GH10666p pro... 29 7.4
AY071551-1|AAL49173.1| 283|Drosophila melanogaster RE61793p pro... 29 7.4
AF367177-1|AAK31263.1| 1183|Drosophila melanogaster chromatin as... 29 7.4
AE014298-1215|AAF46399.1| 1183|Drosophila melanogaster CG12109-P... 29 7.4
AE014297-3981|AAF56612.1| 283|Drosophila melanogaster CG5480-PA... 29 7.4
AE014296-3419|AAF51641.1| 340|Drosophila melanogaster CG3698-PA... 29 7.4
AY113374-1|AAM29379.1| 609|Drosophila melanogaster LP06948p pro... 28 9.8
AY061556-1|AAL29104.1| 581|Drosophila melanogaster LP09339p pro... 28 9.8
AE014297-1210|AAF54562.4| 1483|Drosophila melanogaster CG4509-PB... 28 9.8
AE014297-1125|AAF54511.2| 3111|Drosophila melanogaster CG3996-PA... 28 9.8
AE014296-1802|AAF50167.2| 581|Drosophila melanogaster CG6611-PB... 28 9.8
AE014296-1801|AAF50168.2| 581|Drosophila melanogaster CG6611-PA... 28 9.8
>BT003275-1|AAO25032.1| 772|Drosophila melanogaster LD14577p
protein.
Length = 772
Score = 55.6 bits (128), Expect = 6e-08
Identities = 27/69 (39%), Positives = 39/69 (56%)
Frame = +1
Query: 10 RKRAGEYKYRGWGTELAPEHLTQLYNKQIELWYQVXXXXXXXXXXXXXTNHKVLPRDEKD 189
RK+AGEYK RGWG E+ PE LY KQ +LW QV + H+ + ++EK+
Sbjct: 245 RKKAGEYKCRGWGIEIDPE----LYKKQKDLWDQVSKRSSLSALSLASSVHRPITKEEKE 300
Query: 190 GKESKNQSP 216
+ +K +P
Sbjct: 301 QENNKKSTP 309
>AE014297-661|AAN13384.1| 537|Drosophila melanogaster CG17816-PC,
isoform C protein.
Length = 537
Score = 55.6 bits (128), Expect = 6e-08
Identities = 27/69 (39%), Positives = 39/69 (56%)
Frame = +1
Query: 10 RKRAGEYKYRGWGTELAPEHLTQLYNKQIELWYQVXXXXXXXXXXXXXTNHKVLPRDEKD 189
RK+AGEYK RGWG E+ PE LY KQ +LW QV + H+ + ++EK+
Sbjct: 371 RKKAGEYKCRGWGIEIDPE----LYKKQKDLWDQVSKRSSLSALSLASSVHRPITKEEKE 426
Query: 190 GKESKNQSP 216
+ +K +P
Sbjct: 427 QENNKKSTP 435
>AE014297-660|AAF54155.1| 537|Drosophila melanogaster CG17816-PA,
isoform A protein.
Length = 537
Score = 55.6 bits (128), Expect = 6e-08
Identities = 27/69 (39%), Positives = 39/69 (56%)
Frame = +1
Query: 10 RKRAGEYKYRGWGTELAPEHLTQLYNKQIELWYQVXXXXXXXXXXXXXTNHKVLPRDEKD 189
RK+AGEYK RGWG E+ PE LY KQ +LW QV + H+ + ++EK+
Sbjct: 371 RKKAGEYKCRGWGIEIDPE----LYKKQKDLWDQVSKRSSLSALSLASSVHRPITKEEKE 426
Query: 190 GKESKNQSP 216
+ +K +P
Sbjct: 427 QENNKKSTP 435
>AE014297-659|AAN13383.1| 878|Drosophila melanogaster CG17816-PB,
isoform B protein.
Length = 878
Score = 55.6 bits (128), Expect = 6e-08
Identities = 27/69 (39%), Positives = 39/69 (56%)
Frame = +1
Query: 10 RKRAGEYKYRGWGTELAPEHLTQLYNKQIELWYQVXXXXXXXXXXXXXTNHKVLPRDEKD 189
RK+AGEYK RGWG E+ PE LY KQ +LW QV + H+ + ++EK+
Sbjct: 371 RKKAGEYKCRGWGIEIDPE----LYKKQKDLWDQVSKRSSLSALSLASSVHRPITKEEKE 426
Query: 190 GKESKNQSP 216
+ +K +P
Sbjct: 427 QENNKKSTP 435
>AE014297-658|AAS65123.2| 772|Drosophila melanogaster CG17816-PD,
isoform D protein.
Length = 772
Score = 55.6 bits (128), Expect = 6e-08
Identities = 27/69 (39%), Positives = 39/69 (56%)
Frame = +1
Query: 10 RKRAGEYKYRGWGTELAPEHLTQLYNKQIELWYQVXXXXXXXXXXXXXTNHKVLPRDEKD 189
RK+AGEYK RGWG E+ PE LY KQ +LW QV + H+ + ++EK+
Sbjct: 245 RKKAGEYKCRGWGIEIDPE----LYKKQKDLWDQVSKRSSLSALSLASSVHRPITKEEKE 300
Query: 190 GKESKNQSP 216
+ +K +P
Sbjct: 301 QENNKKSTP 309
>AF160940-1|AAD46880.1| 1260|Drosophila melanogaster BcDNA.LD19168
protein.
Length = 1260
Score = 31.9 bits (69), Expect = 0.79
Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +1
Query: 157 NHKVLPRDEKDGKESKNQSPKKFRS-FRSAPHQSSTQNFRKRRPWSVPLTRPRPRSKGRS 333
N PR GK K+ S ++ S RS +S N R+R S LT PR R
Sbjct: 36 NENCEPRSSGSGKRGKSNSRRRSTSRGRSDSRNTSPSNTRRRHSLSRSLTPPRRRYDSPD 95
Query: 334 Y 336
Y
Sbjct: 96 Y 96
>AE014297-55|AAF52146.1| 1260|Drosophila melanogaster CG9776-PA,
isoform A protein.
Length = 1260
Score = 31.9 bits (69), Expect = 0.79
Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +1
Query: 157 NHKVLPRDEKDGKESKNQSPKKFRS-FRSAPHQSSTQNFRKRRPWSVPLTRPRPRSKGRS 333
N PR GK K+ S ++ S RS +S N R+R S LT PR R
Sbjct: 36 NENCEPRSSGSGKRGKSNSRRRSTSRGRSDSRNTSPSNTRRRHSLSRSLTPPRRRYDSPD 95
Query: 334 Y 336
Y
Sbjct: 96 Y 96
>AY075409-1|AAL68234.1| 336|Drosophila melanogaster LD33329p
protein.
Length = 336
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = +2
Query: 197 SPRTNPLRSLDRSGRRPTSHPRKTSGNEG---PGAFPSQDLAP 316
SP NP+RS R + HP K ++ G +P+Q LAP
Sbjct: 223 SPIVNPMRSNKRGSQHLDDHPSKRRVDDSLSISGYYPTQPLAP 265
>AE014297-3829|AAN14061.1| 336|Drosophila melanogaster CG17383-PD,
isoform D protein.
Length = 336
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = +2
Query: 197 SPRTNPLRSLDRSGRRPTSHPRKTSGNEG---PGAFPSQDLAP 316
SP NP+RS R + HP K ++ G +P+Q LAP
Sbjct: 223 SPIVNPMRSNKRGSQHLDDHPSKRRVDDSLSISGYYPTQPLAP 265
>AE014297-3828|AAN14060.1| 336|Drosophila melanogaster CG17383-PC,
isoform C protein.
Length = 336
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = +2
Query: 197 SPRTNPLRSLDRSGRRPTSHPRKTSGNEG---PGAFPSQDLAP 316
SP NP+RS R + HP K ++ G +P+Q LAP
Sbjct: 223 SPIVNPMRSNKRGSQHLDDHPSKRRVDDSLSISGYYPTQPLAP 265
>AE014297-3827|AAF56485.1| 336|Drosophila melanogaster CG17383-PB,
isoform B protein.
Length = 336
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = +2
Query: 197 SPRTNPLRSLDRSGRRPTSHPRKTSGNEG---PGAFPSQDLAP 316
SP NP+RS R + HP K ++ G +P+Q LAP
Sbjct: 223 SPIVNPMRSNKRGSQHLDDHPSKRRVDDSLSISGYYPTQPLAP 265
>AE014297-3826|AAF56484.1| 336|Drosophila melanogaster CG17383-PA,
isoform A protein.
Length = 336
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = +2
Query: 197 SPRTNPLRSLDRSGRRPTSHPRKTSGNEG---PGAFPSQDLAP 316
SP NP+RS R + HP K ++ G +P+Q LAP
Sbjct: 223 SPIVNPMRSNKRGSQHLDDHPSKRRVDDSLSISGYYPTQPLAP 265
>AE014298-734|AAF46030.2| 573|Drosophila melanogaster CG10706-PE,
isoform E protein.
Length = 573
Score = 29.5 bits (63), Expect = 4.2
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
Frame = +3
Query: 417 APLRGPRPAHLKHA-----PNGHDARPSNRAMTKYHGPNASXXRPLXXRSP 554
AP++ P P + +A P+ SN A YH P + P+ R+P
Sbjct: 497 APIQAPTPQSMFNAAPMLFPHSRSVPSSNNAAATYHWPTSPILPPISSRTP 547
>AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA
protein.
Length = 2284
Score = 29.5 bits (63), Expect = 4.2
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Frame = +2
Query: 119 ADHRCRHYHSLPPITRCCLETKKTAKSPRTNPLRSLDRSGRRP--TSHPRKTSGNEGPGA 292
+D C+ +LPP TR T T + P P + R + P T P+ G+ P
Sbjct: 1722 SDPSCQPTTNLPPTTR----TPVTTRKPNCYPGSTDSRCPQTPQTTIRPKCYPGSTDPDC 1777
Query: 293 FPSQDLAPEA-KEEVTGTQFR*GCCFRWSKD 382
P+ +L P + V TQ R C+ S D
Sbjct: 1778 QPTTNLPPSTPRPTVPTTQPR---CYPGSSD 1805
>L08811-1|AAA79329.2| 3503|Drosophila melanogaster adherin protein.
Length = 3503
Score = 29.1 bits (62), Expect = 5.6
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +3
Query: 438 PAHLKHAPNGHDARPS---NRAMTKYHGPNASXXRPLXXRSPXV 560
PAHL +P GH+A S + AM+ P+ S PL RSP +
Sbjct: 3428 PAHLPRSPIGHEASGSFSTSSAMSPSFSPSLS---PLATRSPSI 3468
>BT024409-1|ABC86471.1| 821|Drosophila melanogaster IP03940p
protein.
Length = 821
Score = 29.1 bits (62), Expect = 5.6
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +3
Query: 438 PAHLKHAPNGHDARPS---NRAMTKYHGPNASXXRPLXXRSPXV 560
PAHL +P GH+A S + AM+ P+ S PL RSP +
Sbjct: 746 PAHLPRSPIGHEASGSFSTSSAMSPSFSPSLS---PLATRSPSI 786
>AF181652-1|AAD55437.1| 819|Drosophila melanogaster BcDNA.LD23587
protein.
Length = 819
Score = 29.1 bits (62), Expect = 5.6
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +1
Query: 16 RAGEYKYRGWGTELAPEHLTQLYNKQIELWY 108
+ G+Y Y GWGT E LY K E Y
Sbjct: 593 KLGDYYYYGWGTSTDFETAAALYRKASEQQY 623
>AE014298-2132|AAF48444.1| 434|Drosophila melanogaster CG9123-PA
protein.
Length = 434
Score = 29.1 bits (62), Expect = 5.6
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 175 RDEKDGKESKNQSPKKFRSFRSAPHQ-SSTQNFRKRRPWSVPLTRPRPRSKGRS 333
+DE+ +ES + K+ F + SS RKR+P +P P SKG++
Sbjct: 376 KDEESSEESNSSEDKENDDFSDSDSDVSSDHGHRKRKPMKRE-QQPTPASKGKA 428
>AE014297-3378|AAF56178.1| 819|Drosophila melanogaster CG10221-PA
protein.
Length = 819
Score = 29.1 bits (62), Expect = 5.6
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +1
Query: 16 RAGEYKYRGWGTELAPEHLTQLYNKQIELWY 108
+ G+Y Y GWGT E LY K E Y
Sbjct: 593 KLGDYYYYGWGTSTDFETAAALYRKASEQQY 623
>AE014134-139|AAF51468.3| 3556|Drosophila melanogaster CG17941-PA
protein.
Length = 3556
Score = 29.1 bits (62), Expect = 5.6
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +3
Query: 438 PAHLKHAPNGHDARPS---NRAMTKYHGPNASXXRPLXXRSPXV 560
PAHL +P GH+A S + AM+ P+ S PL RSP +
Sbjct: 3481 PAHLPRSPIGHEASGSFSTSSAMSPSFSPSLS---PLATRSPSI 3521
>BT003301-1|AAO25061.1| 348|Drosophila melanogaster GH10666p
protein.
Length = 348
Score = 28.7 bits (61), Expect = 7.4
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 235 RSAPHQSSTQNFRKRRPWSVPLTRPRPRSKGRS 333
+S P + Q + KRRP + TR P+ KGR+
Sbjct: 103 KSKPQRIEFQRYSKRRPRVLVPTRTAPKVKGRA 135
>AY071551-1|AAL49173.1| 283|Drosophila melanogaster RE61793p
protein.
Length = 283
Score = 28.7 bits (61), Expect = 7.4
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -3
Query: 436 RGPRSGAASRDLNAEFSPVFTPSKAAPSSKLCPCN 332
R P SG+ S +L A + P AAPS+ P N
Sbjct: 246 RRPSSGSVSAELEAPSAGYIPPPAAAPSATYLPVN 280
>AF367177-1|AAK31263.1| 1183|Drosophila melanogaster chromatin
assembly factor-1 p180subunit protein.
Length = 1183
Score = 28.7 bits (61), Expect = 7.4
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +2
Query: 176 ETKKTAKSPRTNPLRSLDRSGRR-PTSHPRKTSG-NEGPGAFPSQDLAPEAKEEVT 337
E K TAK + +PL + D + P KT G + GA P++ E KE+ T
Sbjct: 312 EVKTTAKDNKKDPLIAEDSKPKEVPKKETSKTGGKGKKEGAKPAEKSKKEEKEDST 367
>AE014298-1215|AAF46399.1| 1183|Drosophila melanogaster CG12109-PB
protein.
Length = 1183
Score = 28.7 bits (61), Expect = 7.4
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +2
Query: 176 ETKKTAKSPRTNPLRSLDRSGRR-PTSHPRKTSG-NEGPGAFPSQDLAPEAKEEVT 337
E K TAK + +PL + D + P KT G + GA P++ E KE+ T
Sbjct: 312 EVKTTAKDNKKDPLIAEDSKPKEVPKKETSKTGGKGKKEGAKPAEKSKKEEKEDST 367
>AE014297-3981|AAF56612.1| 283|Drosophila melanogaster CG5480-PA
protein.
Length = 283
Score = 28.7 bits (61), Expect = 7.4
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -3
Query: 436 RGPRSGAASRDLNAEFSPVFTPSKAAPSSKLCPCN 332
R P SG+ S +L A + P AAPS+ P N
Sbjct: 246 RRPSSGSVSAELEAPSAGYIPPPAAAPSATYLPVN 280
>AE014296-3419|AAF51641.1| 340|Drosophila melanogaster CG3698-PA
protein.
Length = 340
Score = 28.7 bits (61), Expect = 7.4
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 235 RSAPHQSSTQNFRKRRPWSVPLTRPRPRSKGRS 333
+S P + Q + KRRP + TR P+ KGR+
Sbjct: 95 KSKPQRIEFQRYSKRRPRVLVPTRTAPKVKGRA 127
>AY113374-1|AAM29379.1| 609|Drosophila melanogaster LP06948p
protein.
Length = 609
Score = 28.3 bits (60), Expect = 9.8
Identities = 19/63 (30%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Frame = +3
Query: 432 PRPAHLKHAPNGHDARPSNRAMTKYHGP--NASXXRPLXXRSPXVKFHLNRPGQIPEQXT 605
P PA K P G +RA+ K H P PL S +F ++P T
Sbjct: 426 PEPAPRKSPPKGSRLLKEDRALNKQHKPKIETDTNHPLLQHSEH-RFERENALEVPAAPT 484
Query: 606 CLP 614
LP
Sbjct: 485 KLP 487
>AY061556-1|AAL29104.1| 581|Drosophila melanogaster LP09339p
protein.
Length = 581
Score = 28.3 bits (60), Expect = 9.8
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +3
Query: 279 KALERSPHKTSPQKQRKKLQGHSFDEGAALDGVKTGENSAFKSRDAAPLRG 431
KA+E+ P TSP + + G E + G KTG+ + ++ G
Sbjct: 364 KAVEKRPSPTSPATESESDSGSPKAETRTVSGSKTGQKKSSNKQNTKKASG 414
>AE014297-1210|AAF54562.4| 1483|Drosophila melanogaster CG4509-PB
protein.
Length = 1483
Score = 28.3 bits (60), Expect = 9.8
Identities = 19/63 (30%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Frame = +3
Query: 432 PRPAHLKHAPNGHDARPSNRAMTKYHGP--NASXXRPLXXRSPXVKFHLNRPGQIPEQXT 605
P PA K P G +RA+ K H P PL S +F ++P T
Sbjct: 1300 PEPAPRKSPPKGSRLLKEDRALNKQHKPKIETDTNHPLLQHSEH-RFERENALEVPAAPT 1358
Query: 606 CLP 614
LP
Sbjct: 1359 KLP 1361
>AE014297-1125|AAF54511.2| 3111|Drosophila melanogaster CG3996-PA
protein.
Length = 3111
Score = 28.3 bits (60), Expect = 9.8
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +2
Query: 179 TKKTAKSPRTNPLRSLDRSGRRPTSHPRKTSGNEGPGAFPSQ 304
++K+AKSP T+P R+ RS PT P + S + P P++
Sbjct: 2276 SRKSAKSPYTSPSRNRQRS-PSPTRSPERKS-KKSPYTSPAR 2315
>AE014296-1802|AAF50167.2| 581|Drosophila melanogaster CG6611-PB,
isoform B protein.
Length = 581
Score = 28.3 bits (60), Expect = 9.8
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +3
Query: 279 KALERSPHKTSPQKQRKKLQGHSFDEGAALDGVKTGENSAFKSRDAAPLRG 431
KA+E+ P TSP + + G E + G KTG+ + ++ G
Sbjct: 364 KAVEKRPSPTSPATESESDSGSPKAETRTVSGSKTGQKKSSNKQNTKKASG 414
>AE014296-1801|AAF50168.2| 581|Drosophila melanogaster CG6611-PA,
isoform A protein.
Length = 581
Score = 28.3 bits (60), Expect = 9.8
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +3
Query: 279 KALERSPHKTSPQKQRKKLQGHSFDEGAALDGVKTGENSAFKSRDAAPLRG 431
KA+E+ P TSP + + G E + G KTG+ + ++ G
Sbjct: 364 KAVEKRPSPTSPATESESDSGSPKAETRTVSGSKTGQKKSSNKQNTKKASG 414
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,504,424
Number of Sequences: 53049
Number of extensions: 637385
Number of successful extensions: 3777
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 3429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3761
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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