Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0214
(660 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 35 0.059
AL008867-2|CAE17750.1| 763|Caenorhabditis elegans Hypothetical ... 31 0.96
U58757-9|AAM75377.1| 503|Caenorhabditis elegans Hypothetical pr... 30 1.3
U58757-8|AAC47918.3| 506|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z70206-3|CAA94123.1| 176|Caenorhabditis elegans Hypothetical pr... 30 1.7
AF003151-1|AAK18921.2| 1184|Caenorhabditis elegans Hypothetical ... 29 3.9
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ... 28 5.1
Z81123-4|CAB03367.2| 986|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z54281-8|CAA91051.2| 986|Caenorhabditis elegans Hypothetical pr... 28 6.8
X91803-1|CAA62913.1| 880|Caenorhabditis elegans sodium-calcium ... 27 8.9
AL132858-14|CAJ90511.1| 873|Caenorhabditis elegans Hypothetical... 27 8.9
AL132858-13|CAB60477.1| 880|Caenorhabditis elegans Hypothetical... 27 8.9
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 34.7 bits (76), Expect = 0.059
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 5/86 (5%)
Frame = +2
Query: 92 KSSCGTKCPADHRCRHYHSLPPITRCCLETKKTAKSPRTNPLRSLDRSGRRPTSHPRKTS 271
+S +K PA R + PP + +KSP P R+ RS P R S
Sbjct: 321 RSPSQSKSPAPKRAKSRSKSPPAPARRRRSPSASKSPPPAPKRAKSRSKSPPARRRRSPS 380
Query: 272 GNEGPGA-----FPSQDLAPEAKEEV 334
++ P A PS+ +P K E+
Sbjct: 381 ASKSPPAPRRRRSPSKSRSPAPKREI 406
Score = 30.7 bits (66), Expect = 0.96
Identities = 29/98 (29%), Positives = 38/98 (38%), Gaps = 2/98 (2%)
Frame = +1
Query: 193 KESKNQSPKKFRSFRSAPHQSSTQNFRKRRPWSVPLTR--PRPRSKGRSYRDTVSMRVLL 366
+ S ++SP+ R RS S R+R P + P R P+ R R R S
Sbjct: 454 RRSPSKSPQAPRRRRSPSGSKSRSPRRRRSPAAAPRRRQSPQRRRSPRRRRSPSSSSRSR 513
Query: 367 *ME*RPVRTRHSSPATPPRSADPAPRISSMRPTDTTRD 480
P R R S P A +P + RP DT D
Sbjct: 514 SPPPPPRRPRQDSEQQAP-VAVKSPEMKKRRPNDTDSD 550
>AL008867-2|CAE17750.1| 763|Caenorhabditis elegans Hypothetical
protein C46E1.3 protein.
Length = 763
Score = 30.7 bits (66), Expect = 0.96
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Frame = +1
Query: 193 KESKNQSPKKFRSFRSAPHQSSTQNFRKRRPWSV--PLTRPRPRS-KGRSYRDTVSMRVL 363
K SKN+ + +F +A + N P + P T P P + + RDT S+R
Sbjct: 4 KTSKNEKVENHVAFPTAKTLADLPNITITHPTPIYQPDT-PNPFTVPPPTPRDTHSLRSF 62
Query: 364 L*ME*RPV---RTRHSSPATPPRSADPAPRISSMRPTDTTRD 480
+ E P+ + HS ++PPRS+ P P S P+D +D
Sbjct: 63 I--EETPILLGSSEHSGSSSPPRSSPPPPP-SIPPPSDPPKD 101
>U58757-9|AAM75377.1| 503|Caenorhabditis elegans Hypothetical
protein C01B10.6b protein.
Length = 503
Score = 30.3 bits (65), Expect = 1.3
Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +2
Query: 23 ASTSTAAGARNWRQNTSLSFT-ISKSSCGTKCPADHRCRHYHSLPPITRCCLET-KKTAK 196
A T+T A + + +F S+SSC T P S P +T C T T
Sbjct: 159 ALTATQASINTRLDSATNTFVCFSQSSCVTDVPTTPEPTSPGSTPAVTECTNTTLTATLD 218
Query: 197 SPRTNPLRSLDRSGRRPTSHPRKTSGN 277
+P+T+P S + + S TS N
Sbjct: 219 TPQTHPQPSTQNAAQCVVSVKAYTSTN 245
>U58757-8|AAC47918.3| 506|Caenorhabditis elegans Hypothetical
protein C01B10.6a protein.
Length = 506
Score = 30.3 bits (65), Expect = 1.3
Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +2
Query: 23 ASTSTAAGARNWRQNTSLSFT-ISKSSCGTKCPADHRCRHYHSLPPITRCCLET-KKTAK 196
A T+T A + + +F S+SSC T P S P +T C T T
Sbjct: 162 ALTATQASINTRLDSATNTFVCFSQSSCVTDVPTTPEPTSPGSTPAVTECTNTTLTATLD 221
Query: 197 SPRTNPLRSLDRSGRRPTSHPRKTSGN 277
+P+T+P S + + S TS N
Sbjct: 222 TPQTHPQPSTQNAAQCVVSVKAYTSTN 248
>Z70206-3|CAA94123.1| 176|Caenorhabditis elegans Hypothetical
protein C49F8.3 protein.
Length = 176
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +2
Query: 128 RCRHYHSLPPITRCCLETKKTAKSPRTNPLRSLDR---SGRRPTSHPRKTSG 274
RCR Y LP I C +T ++ R+N + L +P S+PR+ G
Sbjct: 89 RCRLYKYLPAIVHCAAQTHDNSECCRSNGVAELGEQCVQMCQPQSNPRRFWG 140
>AF003151-1|AAK18921.2| 1184|Caenorhabditis elegans Hypothetical
protein D1007.15 protein.
Length = 1184
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -3
Query: 154 WKRVIMPTAMICGTLGTTARFAYCKAE 74
++ ++P A++C LGT RF Y E
Sbjct: 256 FEHYVIPVALLCSILGTIVRFCYSDDE 282
>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
protein Y18D10A.1 protein.
Length = 1634
Score = 28.3 bits (60), Expect = 5.1
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Frame = +2
Query: 146 SLPPITRCCLETKKTAKSPRTNPLRSLDRSGRRPTSHP--RKTSGNEGPGAFPSQDLAPE 319
+LP ++ LE K ++P + + SGR P + P +T G A P DL E
Sbjct: 787 ALPTVSPTALEPPKAQENPTAELPTTSEISGRAPQALPTSSQTPPTSGSAAPPVDDLLSE 846
Query: 320 AKEEVTGTQFR 352
T+ R
Sbjct: 847 ILSGAKTTKTR 857
>Z81123-4|CAB03367.2| 986|Caenorhabditis elegans Hypothetical protein
F46C5.6 protein.
Length = 986
Score = 27.9 bits (59), Expect = 6.8
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 6/103 (5%)
Frame = +1
Query: 175 RDEKDGKESKNQSPKKFRSFRSAPHQSSTQN----FRKRRPWSVPLTRPRPRSKGRSYRD 342
+ EK KESK + P R+ + F + +P R S R+ R
Sbjct: 755 KKEKSKKESKIRKPSIRSRLRTKEEPEEEEEVLGEFVRSSSLRIPTQPIRATSPWRTERK 814
Query: 343 TVSMRVLL*ME*RPVRTRHSSPATPP--RSADPAPRISSMRPT 465
+++ + +PV T S +P RS PAP+ S++RP+
Sbjct: 815 AIAV-----VRPQPVITVRSQSPSPMSYRSPSPAPKESAIRPS 852
>Z54281-8|CAA91051.2| 986|Caenorhabditis elegans Hypothetical protein
F46C5.6 protein.
Length = 986
Score = 27.9 bits (59), Expect = 6.8
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 6/103 (5%)
Frame = +1
Query: 175 RDEKDGKESKNQSPKKFRSFRSAPHQSSTQN----FRKRRPWSVPLTRPRPRSKGRSYRD 342
+ EK KESK + P R+ + F + +P R S R+ R
Sbjct: 755 KKEKSKKESKIRKPSIRSRLRTKEEPEEEEEVLGEFVRSSSLRIPTQPIRATSPWRTERK 814
Query: 343 TVSMRVLL*ME*RPVRTRHSSPATPP--RSADPAPRISSMRPT 465
+++ + +PV T S +P RS PAP+ S++RP+
Sbjct: 815 AIAV-----VRPQPVITVRSQSPSPMSYRSPSPAPKESAIRPS 852
>X91803-1|CAA62913.1| 880|Caenorhabditis elegans sodium-calcium
exchanger protein.
Length = 880
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +2
Query: 11 ASVPASTSTAAGARNWRQNTSLSFTISKSSCGTKCPADHRCRHYHSLP 154
A V A+TS G +W+Q + ++T+ + + HY +LP
Sbjct: 643 ALVTANTSIMVGTSSWKQQFTEAWTLEPEEEDGEVTTMEKVMHYIALP 690
>AL132858-14|CAJ90511.1| 873|Caenorhabditis elegans Hypothetical
protein Y113G7A.4b protein.
Length = 873
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +2
Query: 11 ASVPASTSTAAGARNWRQNTSLSFTISKSSCGTKCPADHRCRHYHSLP 154
A V A+TS G +W+Q + ++T+ + + HY +LP
Sbjct: 643 ALVTANTSIMVGTSSWKQQFTEAWTLEPEEEDGEVTTMEKVMHYIALP 690
>AL132858-13|CAB60477.1| 880|Caenorhabditis elegans Hypothetical
protein Y113G7A.4a protein.
Length = 880
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +2
Query: 11 ASVPASTSTAAGARNWRQNTSLSFTISKSSCGTKCPADHRCRHYHSLP 154
A V A+TS G +W+Q + ++T+ + + HY +LP
Sbjct: 643 ALVTANTSIMVGTSSWKQQFTEAWTLEPEEEDGEVTTMEKVMHYIALP 690
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,362,908
Number of Sequences: 27780
Number of extensions: 301874
Number of successful extensions: 1376
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1365
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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