Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0213
(667 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory recept... 25 0.56
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 24 0.97
L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protei... 24 0.97
AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory recept... 24 1.3
AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory recept... 24 1.3
AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory recept... 23 3.0
AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory recept... 23 3.0
AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory recept... 23 3.0
AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein. 22 3.9
AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. 22 3.9
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 22 5.2
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 21 6.9
>AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory receptor
candidate 16 protein.
Length = 452
Score = 25.0 bits (52), Expect = 0.56
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2
Query: 243 DKIFHHCNLKSVLVSCSKNHHNLY 172
+KI H NL LV +K+H++LY
Sbjct: 228 NKIKHLVNLHKNLVKVAKDHNSLY 251
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 24.2 bits (50), Expect = 0.97
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 252 FLYDKIFHHCNLKSVLVSCSKNHHNLYR 169
F +K + C KS+L S K+H N+YR
Sbjct: 259 FQCNKCDYTCVNKSMLNSHMKSHSNVYR 286
>L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protein
protein.
Length = 69
Score = 24.2 bits (50), Expect = 0.97
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 252 FLYDKIFHHCNLKSVLVSCSKNHHNLYR 169
F +K + C KS+L S K+H N+YR
Sbjct: 17 FQCNKCDYTCVNKSMLNSHMKSHSNVYR 44
>AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory receptor
candidate 56 protein.
Length = 358
Score = 23.8 bits (49), Expect = 1.3
Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +3
Query: 21 IIYGCVXYLKIQLVIKFTNVVLIYLNKLIIMXQFTLIXV---VHLTALFASTACI 176
+I+GC+ LK+ V K V + L + + + V +HL+ L A +
Sbjct: 104 VIFGCIFALKVIEVFKNIEEVDVAFRSLAVWVPYKHLYVNILIHLSGLVTIVATL 158
>AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory receptor
candidate 21 protein.
Length = 386
Score = 23.8 bits (49), Expect = 1.3
Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +3
Query: 21 IIYGCVXYLKIQLVIKFTNVVLIYLNKLIIMXQFTLIXV---VHLTALFASTACI 176
+I+GC+ LK+ V K V + L + + + V +HL+ L A +
Sbjct: 104 VIFGCIFALKVIEVFKNIEEVDVAFRSLAVWVPYKHLYVNILIHLSGLVTIVATL 158
>AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory receptor
candidate 30 protein.
Length = 394
Score = 22.6 bits (46), Expect = 3.0
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 144 LTALFASTACIDYDGFLNMKLEHSLNCND 230
L A+F S A I+Y KL +L CN+
Sbjct: 156 LLAVFMSLALIEYILMQTNKLVLALECNN 184
>AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory receptor
candidate 29 protein.
Length = 429
Score = 22.6 bits (46), Expect = 3.0
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 144 LTALFASTACIDYDGFLNMKLEHSLNCND 230
L A+F S A I+Y KL +L CN+
Sbjct: 156 LLAVFMSLALIEYILMQTNKLVLALECNN 184
>AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory receptor
candidate 7 protein.
Length = 429
Score = 22.6 bits (46), Expect = 3.0
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 144 LTALFASTACIDYDGFLNMKLEHSLNCND 230
L A+F S A I+Y KL +L CN+
Sbjct: 156 LLAVFMSLALIEYILMQTNKLVLALECNN 184
>AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein.
Length = 209
Score = 22.2 bits (45), Expect = 3.9
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = -1
Query: 70 NLITSWIFK*XTHP 29
N++ +W+F+ THP
Sbjct: 191 NILRAWLFQHLTHP 204
>AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein.
Length = 456
Score = 22.2 bits (45), Expect = 3.9
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = -1
Query: 70 NLITSWIFK*XTHP 29
N++ +W+F+ THP
Sbjct: 347 NILRAWLFQHLTHP 360
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 21.8 bits (44), Expect = 5.2
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +2
Query: 119 VYLNIXXTFNCTFCIY 166
V LN F C FC+Y
Sbjct: 1127 VLLNCVYLFLCGFCVY 1142
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 446 NGSLMLSMHGYYLMELYCSN 505
N S+ ++MHGY+ Y +N
Sbjct: 150 NVSMNMTMHGYHPSSSYPAN 169
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,862
Number of Sequences: 336
Number of extensions: 1938
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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