Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0213
         (667 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015204-1|AAT94433.1|  249|Drosophila melanogaster RE66462p pro...    36   0.037
AE014296-3582|AAN12182.1|  211|Drosophila melanogaster CG32441-P...    36   0.037
AE014296-3581|AAN12181.1|  198|Drosophila melanogaster CG32441-P...    36   0.037
BT021293-1|AAX33441.1| 1212|Drosophila melanogaster RE26470p pro...    31   1.1  
AY119562-1|AAM50216.1| 1146|Drosophila melanogaster GM13228p pro...    31   1.1  
AE014297-1347|AAF54670.2| 1252|Drosophila melanogaster CG10535-P...    31   1.1  

>BT015204-1|AAT94433.1|  249|Drosophila melanogaster RE66462p
           protein.
          Length = 249

 Score = 36.3 bits (80), Expect = 0.037
 Identities = 19/59 (32%), Positives = 35/59 (59%)
 Frame = +2

Query: 254 LTLKSIXTGVPIIDQILFNEKHLEALKKLANEDEFYSIKTTITTGENSKGTEYXSSVKA 430
           +T+ S+ +G+  ++Q   +   L+ LKKLA  +EFY +K T+     +K  ++ +S KA
Sbjct: 72  VTIPSLNSGLANVEQPDLSTADLDLLKKLALGNEFYRLKATVVYSNGAK-AQFITSNKA 129



 Score = 33.5 bits (73), Expect = 0.26
 Identities = 16/45 (35%), Positives = 28/45 (62%)
 Frame = +3

Query: 120 FTLIXVVHLTALFASTACIDYDGFLNMKLEHSLNCNDEKFCHRGS 254
           F LI V+ L +  +S   +++D ++ ++L+HSL  N E F  RG+
Sbjct: 29  FVLIFVLGLVS--SSWGFLEHDSWITVELQHSLAANSESFSFRGN 71


>AE014296-3582|AAN12182.1|  211|Drosophila melanogaster CG32441-PA,
           isoform A protein.
          Length = 211

 Score = 36.3 bits (80), Expect = 0.037
 Identities = 19/59 (32%), Positives = 35/59 (59%)
 Frame = +2

Query: 254 LTLKSIXTGVPIIDQILFNEKHLEALKKLANEDEFYSIKTTITTGENSKGTEYXSSVKA 430
           +T+ S+ +G+  ++Q   +   L+ LKKLA  +EFY +K T+     +K  ++ +S KA
Sbjct: 50  VTIPSLNSGLANVEQPDLSTADLDLLKKLALGNEFYRLKATVVYSNGAK-AQFITSNKA 107



 Score = 33.5 bits (73), Expect = 0.26
 Identities = 16/45 (35%), Positives = 28/45 (62%)
 Frame = +3

Query: 120 FTLIXVVHLTALFASTACIDYDGFLNMKLEHSLNCNDEKFCHRGS 254
           F LI V+ L +  +S   +++D ++ ++L+HSL  N E F  RG+
Sbjct: 7   FVLIFVLGLVS--SSWGFLEHDSWITVELQHSLAANSESFSFRGN 49


>AE014296-3581|AAN12181.1|  198|Drosophila melanogaster CG32441-PB,
           isoform B protein.
          Length = 198

 Score = 36.3 bits (80), Expect = 0.037
 Identities = 19/59 (32%), Positives = 35/59 (59%)
 Frame = +2

Query: 254 LTLKSIXTGVPIIDQILFNEKHLEALKKLANEDEFYSIKTTITTGENSKGTEYXSSVKA 430
           +T+ S+ +G+  ++Q   +   L+ LKKLA  +EFY +K T+     +K  ++ +S KA
Sbjct: 37  VTIPSLNSGLANVEQPDLSTADLDLLKKLALGNEFYRLKATVVYSNGAK-AQFITSNKA 94



 Score = 29.9 bits (64), Expect = 3.3
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = +3

Query: 174 IDYDGFLNMKLEHSLNCNDEKFCHRGS 254
           +++D ++ ++L+HSL  N E F  RG+
Sbjct: 10  LEHDSWITVELQHSLAANSESFSFRGN 36


>BT021293-1|AAX33441.1| 1212|Drosophila melanogaster RE26470p
           protein.
          Length = 1212

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 14/37 (37%), Positives = 25/37 (67%)
 Frame = -1

Query: 613 ICADRELELAXYILSRFRLSLSHXWLALGCVELALEI 503
           +C   E ++  ++ SRFRL L   ++ LGC+E+AL++
Sbjct: 762 VCRLLEQQMNRFV-SRFRLPLITAYVKLGCLEMALQV 797


>AY119562-1|AAM50216.1| 1146|Drosophila melanogaster GM13228p
           protein.
          Length = 1146

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 14/37 (37%), Positives = 25/37 (67%)
 Frame = -1

Query: 613 ICADRELELAXYILSRFRLSLSHXWLALGCVELALEI 503
           +C   E ++  ++ SRFRL L   ++ LGC+E+AL++
Sbjct: 650 VCRLLEQQMNRFV-SRFRLPLITAYVKLGCLEMALQV 685


>AE014297-1347|AAF54670.2| 1252|Drosophila melanogaster CG10535-PA
           protein.
          Length = 1252

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 14/37 (37%), Positives = 25/37 (67%)
 Frame = -1

Query: 613 ICADRELELAXYILSRFRLSLSHXWLALGCVELALEI 503
           +C   E ++  ++ SRFRL L   ++ LGC+E+AL++
Sbjct: 756 VCRLLEQQMNRFV-SRFRLPLITAYVKLGCLEMALQV 791


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,040,441
Number of Sequences: 53049
Number of extensions: 312213
Number of successful extensions: 831
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2868730650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)