Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0210
         (664 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase...    28   0.30 
L10441-1|AAA29361.1|  154|Anopheles gambiae transposase protein.       27   0.53 
L10438-1|AAA29359.1|  154|Anopheles gambiae transposase protein.       27   0.53 
AY994093-1|AAX86006.1|   45|Anopheles gambiae metallothionein 1 ...    26   1.2  
L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.       24   4.9  
AY748839-1|AAV28187.1|  169|Anopheles gambiae cytochrome P450 pr...    24   4.9  

>U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 250

 Score = 27.9 bits (59), Expect = 0.30
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -1

Query: 442 NAVVYQNTVLTNLVEPVSHTMFN-NRHWVFQQDSAPAHRAKSTQDWL 305
           N   Y++ + T+L+   SH   N  R W+F QD+   H + + Q WL
Sbjct: 125 NRFGYRDILDTHLL---SHARKNLPRSWMFMQDNDSKHTSGTVQTWL 168


>L10441-1|AAA29361.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 27.1 bits (57), Expect = 0.53
 Identities = 14/61 (22%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = -1

Query: 472 VHFCEKGVKTNAVVYQNTVLTNLVEPVS--HTMFNNRHWVFQQDSAPAHRAKSTQDWLRR 299
           + + EKG   N+  Y   +L  L + ++        + ++F QD+AP H++  T + ++ 
Sbjct: 86  IDYIEKGKTINSEYYIK-LLERLKDEIATKRPHLKKKKFLFHQDNAPCHKSVKTMEKIQE 144

Query: 298 V 296
           +
Sbjct: 145 L 145


>L10438-1|AAA29359.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 27.1 bits (57), Expect = 0.53
 Identities = 14/61 (22%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = -1

Query: 472 VHFCEKGVKTNAVVYQNTVLTNLVEPVS--HTMFNNRHWVFQQDSAPAHRAKSTQDWLRR 299
           + + EKG   N+  Y   +L  L + ++        + ++F QD+AP H++  T + ++ 
Sbjct: 86  IDYIEKGKTINSEYYIK-LLERLKDEIATKRPHLKKKKFLFHQDNAPCHKSVKTMEKIQE 144

Query: 298 V 296
           +
Sbjct: 145 L 145


>AY994093-1|AAX86006.1|   45|Anopheles gambiae metallothionein 1
           protein.
          Length = 45

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -3

Query: 452 CKNECSCVSKYSPDEPCGT 396
           C N+C C S     +PC T
Sbjct: 6   CGNDCKCTSGCGSGQPCAT 24


>L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
 Frame = -1

Query: 490 YWDLPEVHFCE---KGVKTNAVVYQNTVLTNLVEPVS-HTMFNNRHWVFQQDSAPAHRAK 323
           +WD   + F E   KG   N+  Y+  +    V+  +       +  +F QD+AP H++ 
Sbjct: 77  FWDAHGIFFIEYLQKGKIINSDYYKALLERLKVKSAAKRPHMKKKKVLFHQDNAPCHKSL 136

Query: 322 ST 317
            T
Sbjct: 137 RT 138


>AY748839-1|AAV28187.1|  169|Anopheles gambiae cytochrome P450
           protein.
          Length = 169

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -3

Query: 383 HVQ*QALGIPTRFGASS*SEEHTRLAAAREI 291
           H Q +  G P RF      +EH RLA A+++
Sbjct: 101 HNQREYWGDPERFRPERFLDEHGRLALAKDL 131


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 745,810
Number of Sequences: 2352
Number of extensions: 16470
Number of successful extensions: 37
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)