Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0210
         (664 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X67681-1|CAA47913.1|  339|Drosophila melanogaster ORF protein.         29   4.3  
U33463-1|AAC47095.1|  345|Drosophila melanogaster transposase pr...    29   5.6  
AF324426-1|AAG48328.1| 2531|Drosophila melanogaster transcriptio...    29   5.6  
AE014297-4314|AAF56853.1| 2977|Drosophila melanogaster CG11873-P...    29   5.6  
AE014296-3230|AAF49103.2| 2531|Drosophila melanogaster CG8491-PA...    29   5.6  

>X67681-1|CAA47913.1|  339|Drosophila melanogaster ORF protein.
          Length = 339

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -1

Query: 418 VLTNLVEPVSHTMFNNRHWVFQQDSAPAHRAK 323
           +L N      + +F    W+ QQD+AP H+ +
Sbjct: 220 ILNNHAFTSGNRLFPTTEWILQQDNAPCHKGR 251


>U33463-1|AAC47095.1|  345|Drosophila melanogaster transposase
           protein.
          Length = 345

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
 Frame = -1

Query: 442 NAVVYQNTVLTNL-VEPVSHTMFNNR--HWVFQQDSAPAHRAKSTQDWL 305
           NAV Y + + TNL        +F+N   ++ F QD+ P H+  + ++WL
Sbjct: 214 NAVQYLDILKTNLKASAEKFGLFSNNKPNFKFYQDNDPKHKEYNVRNWL 262


>AF324426-1|AAG48328.1| 2531|Drosophila melanogaster transcriptional
           coactivator kohtaloprotein.
          Length = 2531

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
 Frame = -1

Query: 427 QNTVLTNLVEPVSHTMFNNRHWVFQQDSAPAHRAKSTQDWLRR----VKSTSSGTKTGPP 260
           Q T  TNLV+  S  +   RH VF  + A  H   S  D L      +KS ++ TKT PP
Sbjct: 695 QRTEFTNLVQLFSALI---RHDVFSHN-AYMHTLISRGDLLLESVLVIKSGTTATKTSPP 750

Query: 259 P 257
           P
Sbjct: 751 P 751


>AE014297-4314|AAF56853.1| 2977|Drosophila melanogaster CG11873-PA
            protein.
          Length = 2977

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 18/75 (24%), Positives = 31/75 (41%)
 Frame = -1

Query: 454  GVKTNAVVYQNTVLTNLVEPVSHTMFNNRHWVFQQDSAPAHRAKSTQDWLRRVKSTSSGT 275
            G  T A + QN      + P+ H     +    QQ   P H+ +  Q  L++  +     
Sbjct: 1922 GATTAANIQQNITQRIHIYPMQHQQQQQQQQQ-QQQQQPQHQQQQPQHQLQQTGAKPKQA 1980

Query: 274  KTGPPPVRFESVRLQ 230
            +  PPP + +  +LQ
Sbjct: 1981 QPKPPPQQEQQSQLQ 1995


>AE014296-3230|AAF49103.2| 2531|Drosophila melanogaster CG8491-PA
           protein.
          Length = 2531

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
 Frame = -1

Query: 427 QNTVLTNLVEPVSHTMFNNRHWVFQQDSAPAHRAKSTQDWLRR----VKSTSSGTKTGPP 260
           Q T  TNLV+  S  +   RH VF  + A  H   S  D L      +KS ++ TKT PP
Sbjct: 695 QRTEFTNLVQLFSALI---RHDVFSHN-AYMHTLISRGDLLLESVLVIKSGTTATKTSPP 750

Query: 259 P 257
           P
Sbjct: 751 P 751


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,565,635
Number of Sequences: 53049
Number of extensions: 730044
Number of successful extensions: 2468
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2468
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2848092300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)