Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0203
(663 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g30600.2 68415.m03729 BTB/POZ domain-containing protein conta... 45 5e-05
At2g30600.1 68415.m03728 BTB/POZ domain-containing protein conta... 45 5e-05
At4g08455.1 68417.m01394 BTB/POZ domain-containing protein Inter... 39 0.003
At2g04740.1 68415.m00484 ankyrin repeat family protein contains ... 39 0.003
At1g01640.2 68414.m00082 speckle-type POZ protein-related contai... 37 0.010
At1g01640.1 68414.m00081 speckle-type POZ protein-related contai... 37 0.010
At3g43700.1 68416.m04664 speckle-type POZ protein-related contai... 37 0.014
At5g21010.1 68418.m02497 speckle-type POZ protein-related contai... 36 0.032
At5g48510.1 68418.m05998 speckle-type POZ protein-related contai... 33 0.22
At5g19330.1 68418.m02303 armadillo/beta-catenin repeat family pr... 31 0.52
At2g41370.1 68415.m05106 ankyrin repeat family protein / BTB/POZ... 31 0.52
At3g06190.1 68416.m00711 speckle-type POZ protein-related simila... 31 0.68
At2g40440.1 68415.m04990 BTB/POZ domain-containing protein conta... 31 0.68
At4g04090.1 68417.m00578 speckle-type POZ protein-related contai... 29 2.8
At5g57130.1 68418.m07135 expressed protein 29 3.6
At3g57130.1 68416.m06360 ankyrin repeat family protein / BTB/POZ... 29 3.6
At5g45110.1 68418.m05536 ankyrin repeat family protein / BTB/POZ... 28 4.8
At4g27970.1 68417.m04013 C4-dicarboxylate transporter/malic acid... 28 4.8
At3g03740.1 68416.m00379 speckle-type POZ protein-related contai... 28 4.8
At2g39760.1 68415.m04882 speckle-type POZ protein-related contai... 28 4.8
At3g47950.1 68416.m05228 ATPase, plasma membrane-type, putative ... 27 8.4
At1g65110.1 68414.m07381 ubiquitin carboxyl-terminal hydrolase-r... 27 8.4
At1g28530.1 68414.m03508 expressed protein 27 8.4
>At2g30600.2 68415.m03729 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to MigA
(GI:1841872) [Dictyostelium discoideum]
Length = 809
Score = 44.8 bits (101), Expect = 5e-05
Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Frame = +1
Query: 280 QAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVN 432
Q+HK++LS+ S F +MF M+ + ++L DVS A + ++ FMY GE+N
Sbjct: 365 QSHKVILSLWSVAFAKMFTNGMSESHSSTIYLTDVSPEAFKAMMNFMYSGELN 417
Score = 31.9 bits (69), Expect = 0.39
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = +1
Query: 283 AHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNXKQEELASFI 462
AHK++L F + + ++ L+ VS+ L LLQ++Y G + ELA
Sbjct: 226 AHKVILQASGN-----FPLRSSDGDVIQLRGVSYPILHALLQYIYTGRTQILESELAPLR 280
Query: 463 STAEQLQV 486
+ + +V
Sbjct: 281 DLSSKFEV 288
>At2g30600.1 68415.m03728 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to MigA
(GI:1841872) [Dictyostelium discoideum]
Length = 809
Score = 44.8 bits (101), Expect = 5e-05
Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Frame = +1
Query: 280 QAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVN 432
Q+HK++LS+ S F +MF M+ + ++L DVS A + ++ FMY GE+N
Sbjct: 365 QSHKVILSLWSVAFAKMFTNGMSESHSSTIYLTDVSPEAFKAMMNFMYSGELN 417
Score = 31.9 bits (69), Expect = 0.39
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = +1
Query: 283 AHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNXKQEELASFI 462
AHK++L F + + ++ L+ VS+ L LLQ++Y G + ELA
Sbjct: 226 AHKVILQASGN-----FPLRSSDGDVIQLRGVSYPILHALLQYIYTGRTQILESELAPLR 280
Query: 463 STAEQLQV 486
+ + +V
Sbjct: 281 DLSSKFEV 288
>At4g08455.1 68417.m01394 BTB/POZ domain-containing protein Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to POZ 56
protein (GI:17483747) [Mus musculus]
Length = 243
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = +1
Query: 277 LQAHKLVLSVCSPYFQEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNXKQEEL 450
+ AHK VL SP F+ M + M + + + DVS+ ALR + ++Y E ++
Sbjct: 80 IPAHKSVLVSRSPVFKAMLENEMEESLSGTIKISDVSYDALRTFVYYLYTAEACLDEQMA 139
Query: 451 ASFISTAEQLQVK 489
+ +E+ QVK
Sbjct: 140 CDLLVMSEKYQVK 152
>At2g04740.1 68415.m00484 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 578
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/68 (26%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Frame = +1
Query: 265 EGRLLQAHKLVLSVCSPYFQEMFKMN-PTQHPIVFLKD-VSHSALRDLLQFMYQGEVNXK 438
+GR ++AH+++LS SP+F++ F+ + + F K+ +S+ AL L+ F Y +
Sbjct: 180 QGRPIEAHRVILSARSPFFKQKFENEWKDRREVRFSKEKLSYPALCSLIHFFYSDRLEIS 239
Query: 439 QEELASFI 462
+++ +
Sbjct: 240 VDDMEDLV 247
>At1g01640.2 68414.m00082 speckle-type POZ protein-related contains
Pfam profile:PF00651 BTB/POZ domain; similar to
Speckle-type POZ protein (SP:O43791) [Homo sapiens]
Length = 207
Score = 37.1 bits (82), Expect = 0.010
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +1
Query: 253 KLAAEGRLLQAHKLVLSVCSPYFQEMF---KMNPTQHPIVFLKDVSHSALRDLLQFMYQG 423
K E + HK VL+ S F+ M + + + L D+SH L+ LL+F+Y G
Sbjct: 29 KPGEEAPPIPTHKAVLAARSKVFRNMLDSDECKTSPEESITLPDLSHDELKSLLEFLYSG 88
Query: 424 EVNXKQEELASFISTAEQLQV 486
+ + S A++ +
Sbjct: 89 NLKAPYNQYRSLYLAADKYDI 109
>At1g01640.1 68414.m00081 speckle-type POZ protein-related contains
Pfam profile:PF00651 BTB/POZ domain; similar to
Speckle-type POZ protein (SP:O43791) [Homo sapiens]
Length = 207
Score = 37.1 bits (82), Expect = 0.010
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +1
Query: 253 KLAAEGRLLQAHKLVLSVCSPYFQEMF---KMNPTQHPIVFLKDVSHSALRDLLQFMYQG 423
K E + HK VL+ S F+ M + + + L D+SH L+ LL+F+Y G
Sbjct: 29 KPGEEAPPIPTHKAVLAARSKVFRNMLDSDECKTSPEESITLPDLSHDELKSLLEFLYSG 88
Query: 424 EVNXKQEELASFISTAEQLQV 486
+ + S A++ +
Sbjct: 89 NLKAPYNQYRSLYLAADKYDI 109
>At3g43700.1 68416.m04664 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 415
Score = 36.7 bits (81), Expect = 0.014
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 268 GRLLQAHKLVLSVCSPYFQEMFKMNPTQ-HPIVFLKDVSHSALRDLLQFMYQGEVNXKQE 444
G QAHKLVL+ S +F+ MF + + V + D+ + LL FMY+ + E
Sbjct: 213 GEKFQAHKLVLAARSQFFRSMFYNTLAENNSDVVISDLEPKVFKALLHFMYKDSLPGDVE 272
Query: 445 ELAS 456
L +
Sbjct: 273 PLTA 276
>At5g21010.1 68418.m02497 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 410
Score = 35.5 bits (78), Expect = 0.032
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 268 GRLLQAHKLVLSVCSPYFQ-EMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQ 420
G AHKLVL+ SP+F+ + F + V + D+ + LLQFMY+
Sbjct: 206 GEKFLAHKLVLAARSPFFKSKFFSEFEANNTEVTINDLEPKVFKALLQFMYK 257
>At5g48510.1 68418.m05998 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; similar to Speckle-type
POZ protein (SP:O43791) [Homo sapiens]
Length = 224
Score = 32.7 bits (71), Expect = 0.22
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Frame = +1
Query: 247 RRKLAAEGRLLQAHKLVLSVCSPYFQEMFKMN----PTQH-PIVFLKDVSHSALRDLLQF 411
+ K + EG + AHKL+L+ S F+ MF+++ T+H + L ++ H L ++F
Sbjct: 29 KAKNSDEGSAISAHKLILASRSEVFKNMFELDEFKTSTKHVETITLSEMKHEELEAFVEF 88
Query: 412 M 414
+
Sbjct: 89 I 89
>At5g19330.1 68418.m02303 armadillo/beta-catenin repeat family
protein / BTB/POZ domain-containing protein contains
armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
BTB/POZ domain, Pfam:PF00651
Length = 710
Score = 31.5 bits (68), Expect = 0.52
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +1
Query: 265 EGRLLQAHKLVLSVCSPYFQEMFKMNPTQHPI--VFLKDVSHSALRDLLQFMYQGEVNXK 438
EGR AH++ L S F+ MF + + + ++ +++F+Y G V+
Sbjct: 548 EGRTFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIKWEVFELMMRFIYTGSVDIT 607
Query: 439 QEELASFISTAEQLQVKG 492
E + A+Q ++G
Sbjct: 608 NEISKDLLRAADQYLLEG 625
>At2g41370.1 68415.m05106 ankyrin repeat family protein / BTB/POZ
domain-containing protein contains Pfam domain, PF00023:
Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain
Length = 491
Score = 31.5 bits (68), Expect = 0.52
Identities = 12/45 (26%), Positives = 25/45 (55%)
Frame = +1
Query: 259 AAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQHPIVFLKDVSHSAL 393
+ EGRL+ AH+ +L+ S +F++ F + P+ + H ++
Sbjct: 31 SVEGRLVHAHRCILAARSLFFRKFFCGTDSPQPVTGIDPTQHGSV 75
>At3g06190.1 68416.m00711 speckle-type POZ protein-related similar
to SPOP (novel nuclear speckle-type protein)
(SP:O43791) [Homo sapiens]; contains Pfam PF00651 :
BTB/POZ domain; contains Pfam PF00917: MATH domain
Length = 406
Score = 31.1 bits (67), Expect = 0.68
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +1
Query: 265 EGRLLQAHKLVLSVCSPYFQ-EMF-KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNXK 438
+G AHKLVL+ S F+ ++F + + ++DV + LL F+Y E+
Sbjct: 209 DGETFPAHKLVLAARSAVFRAQLFGPLRSENTNCIIIEDVQAPIFKMLLHFIYWDEMPDM 268
Query: 439 QEELASFISTAEQL 480
Q+ + + + A L
Sbjct: 269 QDLIGTDLKWASTL 282
>At2g40440.1 68415.m04990 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain;
Length = 194
Score = 31.1 bits (67), Expect = 0.68
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Frame = +1
Query: 265 EGRLLQAHKLVLSVCSPYFQEMFKMN----PTQHPIVFLKDVSHSALRDLLQFMY 417
EG AHKLVLS S F++M + + Q + L ++ H L ++F+Y
Sbjct: 36 EGASTSAHKLVLSARSEVFKKMLESDEIKASAQLETITLCEMKHEELEAFIEFIY 90
>At4g04090.1 68417.m00578 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; similar to Speckle-type
POZ protein (SP:O43791) [Homo sapiens]
Length = 192
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = +1
Query: 277 LQAHKLVLSVCSPYFQEMFKMN----PTQHPIVFLKDVSHSALRDLLQFMY 417
+ AHK +LS S F+EMF+ + ++ + L ++ H L + F Y
Sbjct: 38 ISAHKRILSARSEVFEEMFESDKYKASSKLETITLSEMKHEVLEAFVDFTY 88
>At5g57130.1 68418.m07135 expressed protein
Length = 920
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = -2
Query: 275 NLPSAANLRLRDLHATAGHES 213
++PS+ANL L LHAT+GHE+
Sbjct: 357 SVPSSANLGL-SLHATSGHEA 376
>At3g57130.1 68416.m06360 ankyrin repeat family protein / BTB/POZ
domain-containing protein contains Pfam domain, PF00023:
Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain
Length = 467
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/32 (37%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Frame = +1
Query: 259 AAEGRLLQAHKLVLSVCSPYFQEMF-KMNPTQ 351
+ EGRL+ AH+ +L+ S +F++ F + +P+Q
Sbjct: 32 SVEGRLVHAHRCILAARSLFFRKFFCESDPSQ 63
>At5g45110.1 68418.m05536 ankyrin repeat family protein / BTB/POZ
domain-containing protein contains Pfam domain, PF00023:
Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain
Length = 586
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/80 (22%), Positives = 41/80 (51%), Gaps = 10/80 (12%)
Frame = +1
Query: 253 KLAAEGRLLQAHKLVLSVCSPYFQEMF----KMNPTQHPIVFLKD------VSHSALRDL 402
++ +G + H+ +L+ S +FQ++F K++ T+ P L++ V+H A
Sbjct: 63 EIIVDGVPVGVHRCILAARSKFFQDLFKKEKKISKTEKPKYQLREMLPYGAVAHEAFLYF 122
Query: 403 LQFMYQGEVNXKQEELASFI 462
L ++Y G + E+++ +
Sbjct: 123 LSYIYTGRLKPFPLEVSTCV 142
>At4g27970.1 68417.m04013 C4-dicarboxylate transporter/malic acid
transport family protein contains Pfam profile PF03595:
C4-dicarboxylate transporter/malic acid transport
protein
Length = 519
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 601 VSLYLVIQIVFVVRLGPGXKSALVWMAWTF 512
+SL+L +V + L G K +L W A+TF
Sbjct: 373 ISLFLYFSLVCRINLFRGFKFSLAWWAYTF 402
>At3g03740.1 68416.m00379 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 465
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +1
Query: 268 GRLLQAHKLVLSVCSPYFQ-EMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNXKQE 444
G +AH+LVL+ SP F+ E + + + + D+ + LL ++Y+ + E
Sbjct: 224 GEKFRAHRLVLAARSPVFESEFLDVTGEEDRDIEVTDMEPKVFKALLHYIYKDALIEDAE 283
Query: 445 ELAS 456
+S
Sbjct: 284 SSSS 287
>At2g39760.1 68415.m04882 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 408
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 280 QAHKLVLSVCSPYFQEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMY 417
+AHKL+L+ SP F+ F + + + D+ S + +L F+Y
Sbjct: 206 KAHKLILAARSPVFRAQFFGPIGNNNVDRIVIDDIEPSIFKAMLSFIY 253
>At3g47950.1 68416.m05228 ATPase, plasma membrane-type, putative /
proton pump, putative strong similarity to P-type
H(+)-transporting ATPase from Nicotiana plumbaginifolia
[SP|Q08435, SP|Q08436], Lycopersicon esculentum
[GI:5901757, SP|P22180], Solanum tuberosum [GI:435003];
contains InterPro accession IPR001757: ATPase, E1-E2 type
Length = 960
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Frame = -2
Query: 305 TDRTNLCACNNLPSAAN-----LRLRDLHATAGHESPLTYLRG 192
TDRT++ N + A RLR+LH GH + L+G
Sbjct: 906 TDRTHVSELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKG 948
>At1g65110.1 68414.m07381 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF00443:
Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein
of unknown function (DUF629), PF04781: Protein of
unknown function (DUF627)
Length = 1094
Score = 27.5 bits (58), Expect = 8.4
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +1
Query: 202 YVSGLS--WPAVAWRSRRRKLAAEGRLLQAHKLVLSVCSPYFQEMFKMNPTQHPI 360
YV+G S WP A RRKL E RLL L + S ++ P QH I
Sbjct: 279 YVNGWSKDWPLAA-DEERRKLLKEIRLLLVLLLERKILSCSIRDWMMRFPVQHLI 332
>At1g28530.1 68414.m03508 expressed protein
Length = 614
Score = 27.5 bits (58), Expect = 8.4
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 5/73 (6%)
Frame = +1
Query: 91 SPTGIISTKLRIGSTSSRRYHGVGRTIFTMLEQFPRK-----YVSGLSWPAVAWRSRRRK 255
+P +ST + S+ R + I Q K Y+ +P + W S+RR+
Sbjct: 193 NPREQVSTSFTLSSSDERVISVIAEVICISALQSTEKHFLDDYLGKAKFPFMKWLSKRRR 252
Query: 256 LAAEGRLLQAHKL 294
+A+ + HKL
Sbjct: 253 IASRDCSVVLHKL 265
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,693,456
Number of Sequences: 28952
Number of extensions: 246459
Number of successful extensions: 576
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 573
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1393347168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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