Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0201
(728 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54935| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_40500| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_12056| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_4159| Best HMM Match : Vpu (HMM E-Value=2) 29 3.9
SB_44994| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_26655| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_22621| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_58800| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_45526| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_44778| Best HMM Match : TPR_2 (HMM E-Value=0.00023) 28 6.7
SB_9111| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_55976| Best HMM Match : zf-C3HC4 (HMM E-Value=0.087) 28 8.9
SB_55896| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_51325| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_43938| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_42884| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_42734| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_42082| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_40646| Best HMM Match : eIF-5a (HMM E-Value=0.87) 28 8.9
SB_39914| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_39315| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_37596| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_36172| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_35514| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_30147| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_29872| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_29222| Best HMM Match : dsDNA_bind (HMM E-Value=0.78) 28 8.9
SB_26639| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045) 28 8.9
SB_25292| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_21764| Best HMM Match : TPP_enzyme_N (HMM E-Value=1.1e-06) 28 8.9
SB_21491| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_18671| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_16601| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_15561| Best HMM Match : Protamine_P2 (HMM E-Value=8.8) 28 8.9
SB_12571| Best HMM Match : SBF (HMM E-Value=1.6e-37) 28 8.9
SB_11176| Best HMM Match : PTS_EIIB (HMM E-Value=4.4) 28 8.9
SB_9600| Best HMM Match : DUF1596 (HMM E-Value=9.6) 28 8.9
SB_9512| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_8545| Best HMM Match : C2 (HMM E-Value=0.00073) 28 8.9
SB_8047| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_4994| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_3996| Best HMM Match : Connexin (HMM E-Value=2.4) 28 8.9
SB_967| Best HMM Match : Calx-beta (HMM E-Value=2.8) 28 8.9
SB_57694| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_56708| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_55621| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_46709| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_46370| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_46352| Best HMM Match : L71 (HMM E-Value=0.19) 28 8.9
SB_45805| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_39283| Best HMM Match : ADK (HMM E-Value=3.7) 28 8.9
SB_38562| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_38326| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_37618| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_36256| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_34444| Best HMM Match : Cadherin (HMM E-Value=0.0043) 28 8.9
SB_31629| Best HMM Match : DEAD (HMM E-Value=1.2e-05) 28 8.9
SB_18780| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_10526| Best HMM Match : CUE (HMM E-Value=6.5) 28 8.9
SB_5500| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_5183| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
>SB_54935| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 201
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 37 ELVDPPGCRNXALG 78
ELVDPPGCRN +G
Sbjct: 14 ELVDPPGCRNSMIG 27
>SB_40500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +1
Query: 37 ELVDPPGCRNXALGX*RGVFS 99
ELVDPPGCRN G R + S
Sbjct: 14 ELVDPPGCRNSIEGCNRNLTS 34
>SB_12056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1
Query: 37 ELVDPPGCRNXALG 78
ELVDPPGCRN G
Sbjct: 90 ELVDPPGCRNSIAG 103
>SB_4159| Best HMM Match : Vpu (HMM E-Value=2)
Length = 779
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1
Query: 37 ELVDPPGCRNXALG 78
ELVDPPGCRN G
Sbjct: 101 ELVDPPGCRNSITG 114
>SB_44994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 182
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +1
Query: 37 ELVDPPGCRNXAL 75
ELVDPPGCRN L
Sbjct: 14 ELVDPPGCRNSML 26
>SB_26655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +1
Query: 37 ELVDPPGCRNXAL 75
ELVDPPGCRN L
Sbjct: 14 ELVDPPGCRNSIL 26
>SB_22621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 164
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -2
Query: 91 RPFXFQVQXSCSPXDPLVL 35
R F +V SCSP DPLVL
Sbjct: 34 REFVLRVSNSCSPGDPLVL 52
>SB_58800| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -2
Query: 85 FXFQVQXSCSPXDPLVL 35
F +Q+ SCSP DPLVL
Sbjct: 17 FQWQISNSCSPGDPLVL 33
>SB_45526| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 187
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +1
Query: 37 ELVDPPGCRNXAL 75
ELVDPPGCRN L
Sbjct: 14 ELVDPPGCRNSIL 26
>SB_44778| Best HMM Match : TPR_2 (HMM E-Value=0.00023)
Length = 1016
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 103 PG*KRPFXFQVQXSCSPXDPLVL 35
P PF SCSP DPLVL
Sbjct: 882 PSLSHPFPLVTSNSCSPGDPLVL 904
>SB_9111| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 88 PFXFQVQXSCSPXDPLVL 35
PF V SCSP DPLVL
Sbjct: 22 PFYCYVSNSCSPGDPLVL 39
>SB_55976| Best HMM Match : zf-C3HC4 (HMM E-Value=0.087)
Length = 171
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 14 ELVDPPGCRN 23
>SB_55896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 14 ELVDPPGCRN 23
>SB_51325| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 202
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 14 ELVDPPGCRN 23
>SB_43938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 14 ELVDPPGCRN 23
>SB_42884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 74
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 14 ELVDPPGCRN 23
>SB_42734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 14 ELVDPPGCRN 23
>SB_42082| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 14 ELVDPPGCRN 23
>SB_40646| Best HMM Match : eIF-5a (HMM E-Value=0.87)
Length = 209
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 14 ELVDPPGCRN 23
>SB_39914| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 14 ELVDPPGCRN 23
>SB_39315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 14 ELVDPPGCRN 23
>SB_37596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 408
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 34 ELVDPPGCRN 43
>SB_36172| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 14 ELVDPPGCRN 23
>SB_35514| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 14 ELVDPPGCRN 23
>SB_30147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 14 ELVDPPGCRN 23
>SB_29872| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 14 ELVDPPGCRN 23
>SB_29222| Best HMM Match : dsDNA_bind (HMM E-Value=0.78)
Length = 355
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -3
Query: 273 LIAVYTTTNSVSHCILRRLLFVATDVRQHCT*YTKAYYLIARYRIIGLP 127
L +Y T +H + + TD+ H K+Y L Y++ GLP
Sbjct: 199 LTGLYQLTGLPTHRLTNPQAYQPTDIPTHRLTNPKSYQLTGLYQLTGLP 247
>SB_26639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 287
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 90 ELVDPPGCRN 99
>SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045)
Length = 2506
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 658 ELVDPPGCRN 667
>SB_25292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 14 ELVDPPGCRN 23
>SB_21764| Best HMM Match : TPP_enzyme_N (HMM E-Value=1.1e-06)
Length = 183
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 14 ELVDPPGCRN 23
>SB_21491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 14 ELVDPPGCRN 23
>SB_18671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 54
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 14 ELVDPPGCRN 23
>SB_16601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 187
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 14 ELVDPPGCRN 23
>SB_15561| Best HMM Match : Protamine_P2 (HMM E-Value=8.8)
Length = 182
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 14 ELVDPPGCRN 23
>SB_12571| Best HMM Match : SBF (HMM E-Value=1.6e-37)
Length = 257
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 31 ELVDPPGCRN 40
>SB_11176| Best HMM Match : PTS_EIIB (HMM E-Value=4.4)
Length = 117
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 71 ELVDPPGCRN 80
>SB_9600| Best HMM Match : DUF1596 (HMM E-Value=9.6)
Length = 205
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 14 ELVDPPGCRN 23
>SB_9512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 147
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 14 ELVDPPGCRN 23
>SB_8545| Best HMM Match : C2 (HMM E-Value=0.00073)
Length = 106
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 14 ELVDPPGCRN 23
>SB_8047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 14 ELVDPPGCRN 23
>SB_4994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 113
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 14 ELVDPPGCRN 23
>SB_3996| Best HMM Match : Connexin (HMM E-Value=2.4)
Length = 205
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 14 ELVDPPGCRN 23
>SB_967| Best HMM Match : Calx-beta (HMM E-Value=2.8)
Length = 123
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 14 ELVDPPGCRN 23
>SB_57694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 272
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 14 ELVDPPGCRN 23
>SB_56708| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 14 ELVDPPGCRN 23
>SB_55621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 69 ELVDPPGCRN 78
>SB_46709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 176
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 14 ELVDPPGCRN 23
>SB_46370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 31 ELVDPPGCRN 40
>SB_46352| Best HMM Match : L71 (HMM E-Value=0.19)
Length = 179
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 14 ELVDPPGCRN 23
>SB_45805| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 155
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 14 ELVDPPGCRN 23
>SB_39283| Best HMM Match : ADK (HMM E-Value=3.7)
Length = 171
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 14 ELVDPPGCRN 23
>SB_38562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 14 ELVDPPGCRN 23
>SB_38326| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 14 ELVDPPGCRN 23
>SB_37618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 51 ELVDPPGCRN 60
>SB_36256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 122
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 14 ELVDPPGCRN 23
>SB_34444| Best HMM Match : Cadherin (HMM E-Value=0.0043)
Length = 205
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 14 ELVDPPGCRN 23
>SB_31629| Best HMM Match : DEAD (HMM E-Value=1.2e-05)
Length = 415
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 319 ELVDPPGCRN 328
>SB_18780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 212
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 14 ELVDPPGCRN 23
>SB_10526| Best HMM Match : CUE (HMM E-Value=6.5)
Length = 281
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 101 ELVDPPGCRN 110
>SB_5500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 77 ELVDPPGCRN 86
>SB_5183| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1
Query: 37 ELVDPPGCRN 66
ELVDPPGCRN
Sbjct: 14 ELVDPPGCRN 23
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,216,299
Number of Sequences: 59808
Number of extensions: 276722
Number of successful extensions: 1160
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 1149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1160
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1949964354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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