Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0199
(663 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0319 + 22330477-22330504,22331817-22332198,22333015-22333192 118 4e-27
03_01_0382 + 2961665-2961672,2962504-2962557,2962935-2963004,296... 118 4e-27
11_06_0317 + 22326599-22326695,22327058-22327439,22328334-22328511 117 1e-26
03_03_0147 + 14838707-14838734,14839316-14839430,14839464-148396... 73 2e-13
07_03_1358 - 25984897-25984997,25985623-25985650 47 2e-05
08_02_1415 + 26912260-26913075,26913208-26913366,26913521-26913931 30 1.4
08_02_0130 - 12900202-12900277,12901457-12901536,12901654-129017... 30 1.9
05_03_0185 + 9348559-9348958,9349560-9349687,9349782-9349808,935... 30 1.9
12_02_1042 + 25638585-25638711,25639585-25639745,25639873-256400... 29 2.5
10_08_0113 - 14896341-14897153 29 2.5
09_02_0318 - 7191763-7191879,7192375-7192494,7192568-7192666,719... 29 3.3
10_08_1052 - 22567937-22568329,22568436-22568669,22568787-225691... 29 4.4
10_07_0061 + 12489552-12489674,12490761-12490836,12490916-124909... 28 5.8
04_04_1335 - 32730516-32730570,32730655-32731154,32731235-327314... 28 5.8
03_02_0915 + 12360079-12360095,12360225-12361353 28 5.8
08_02_0662 + 19789406-19789546,19789646-19789779,19790272-197904... 28 7.6
07_03_0600 + 19866757-19867218,19867920-19868429 28 7.6
03_04_0181 - 18192774-18192970,18193519-18193882 28 7.6
>11_06_0319 + 22330477-22330504,22331817-22332198,22333015-22333192
Length = 195
Score = 118 bits (284), Expect = 4e-27
Identities = 73/165 (44%), Positives = 100/165 (60%), Gaps = 7/165 (4%)
Frame = +3
Query: 96 FSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLPSRRRTP 275
+ KT+ PRRP+EK RLD ELK++GEYGLR KRE+WRV+Y L+RIR AR LL + P
Sbjct: 10 YGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNP 69
Query: 276 RDC--SKVMPFYVVWFVLEYWMKNR*NSIMCLV*RLRTSWSVVCRRRCSKL----AAKSI 437
R + + + + L +N+ + ++ L T + + RR + + AKSI
Sbjct: 70 RRIFEGEALLRRMNRYGLLADGQNKLDYVLAL-----TVENFLARRLQTLVFKAGMAKSI 124
Query: 438 HHARILIRQRHIRVRKQVVNIPSLLXAWTLQAH*LLS-ESPFXGG 569
HHAR+LIRQRHIRV +Q+VNIPS + + H S SPF GG
Sbjct: 125 HHARVLIRQRHIRVGRQIVNIPSFMVRVESEKHIDFSLTSPFGGG 169
Score = 78.6 bits (185), Expect = 4e-15
Identities = 37/56 (66%), Positives = 46/56 (82%)
Frame = +2
Query: 257 LEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAG 424
L+EK+P+R+FEG ALLRR+ R G+L + Q KLDYVL L +E+FL RRLQT VFKAG
Sbjct: 64 LDEKNPRRIFEGEALLRRMNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKAG 119
>03_01_0382 +
2961665-2961672,2962504-2962557,2962935-2963004,
2963141-2963386,2967246-2967491,2968837-2968888,
2969270-2969651,2970527-2970681,2971389-2971713,
2975803-2975871,2976189-2976346,2976444-2976551,
2976659-2977131
Length = 781
Score = 118 bits (284), Expect = 4e-27
Identities = 73/165 (44%), Positives = 100/165 (60%), Gaps = 7/165 (4%)
Frame = +3
Query: 96 FSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLPSRRRTP 275
+ KT+ PRRP+EK RLD ELK++GEYGLR KRE+WRV+Y L+RIR AR LL + P
Sbjct: 226 YGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNP 285
Query: 276 RDC--SKVMPFYVVWFVLEYWMKNR*NSIMCLV*RLRTSWSVVCRRRCSKL----AAKSI 437
R + + + + L +N+ + ++ L T + + RR + + AKSI
Sbjct: 286 RRIFEGEALLRRMNRYGLLADGQNKLDYVLAL-----TVENFLARRLQTLVFKAGMAKSI 340
Query: 438 HHARILIRQRHIRVRKQVVNIPSLLXAWTLQAH*LLS-ESPFXGG 569
HHAR+LIRQRHIRV +Q+VNIPS + + H S SPF GG
Sbjct: 341 HHARVLIRQRHIRVGRQIVNIPSFMVRVESEKHIDFSLTSPFGGG 385
Score = 78.6 bits (185), Expect = 4e-15
Identities = 37/56 (66%), Positives = 46/56 (82%)
Frame = +2
Query: 257 LEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAG 424
L+EK+P+R+FEG ALLRR+ R G+L + Q KLDYVL L +E+FL RRLQT VFKAG
Sbjct: 280 LDEKNPRRIFEGEALLRRMNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKAG 335
>11_06_0317 + 22326599-22326695,22327058-22327439,22328334-22328511
Length = 218
Score = 117 bits (281), Expect = 1e-26
Identities = 73/163 (44%), Positives = 99/163 (60%), Gaps = 7/163 (4%)
Frame = +3
Query: 102 KTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLPSRRRTPRD 281
KT+ PRRP+EK RLD ELK++GEYGLR KRE+WRV+Y L+RIR AR LL + PR
Sbjct: 35 KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARHLLTLDEKNPRR 94
Query: 282 C--SKVMPFYVVWFVLEYWMKNR*NSIMCLV*RLRTSWSVVCRRRCSKL----AAKSIHH 443
+ + + + L +N+ + ++ L T + + RR + + AKSIHH
Sbjct: 95 IFEGEALLRRMNRYGLLADGQNKLDYVLAL-----TVENFLARRLQTLVFKAGMAKSIHH 149
Query: 444 ARILIRQRHIRVRKQVVNIPSLLXAWTLQAH*LLS-ESPFXGG 569
AR+LIRQRHIRV +Q+VNIPS + + H S SPF GG
Sbjct: 150 ARVLIRQRHIRVGRQIVNIPSFMVRVESEKHIDFSLTSPFGGG 192
Score = 78.6 bits (185), Expect = 4e-15
Identities = 37/56 (66%), Positives = 46/56 (82%)
Frame = +2
Query: 257 LEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAG 424
L+EK+P+R+FEG ALLRR+ R G+L + Q KLDYVL L +E+FL RRLQT VFKAG
Sbjct: 87 LDEKNPRRIFEGEALLRRMNRYGLLADGQNKLDYVLALTVENFLARRLQTLVFKAG 142
>03_03_0147 +
14838707-14838734,14839316-14839430,14839464-14839697,
14840571-14840667
Length = 157
Score = 73.3 bits (172), Expect = 2e-13
Identities = 35/56 (62%), Positives = 44/56 (78%)
Frame = +2
Query: 257 LEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAG 424
L+EK+P+R+FEG ALLR + R G+L E Q KLDYVL L +E+FL+ RLQT VFK G
Sbjct: 53 LDEKNPRRIFEGEALLRHMNRYGLLGEGQNKLDYVLALTVENFLQCRLQTIVFKNG 108
Score = 63.7 bits (148), Expect = 1e-10
Identities = 47/127 (37%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Frame = +3
Query: 96 FSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLPSRRRTP 275
+ KT+ PRRP+EK R D ELK+ GEYGLR+K E+WRV+ L K R +
Sbjct: 10 YGKTFKKPRRPYEKERPDAELKLYGEYGLRSKCELWRVQELLTLDEKNPRRIFEGEALL- 68
Query: 276 RDCSKVMPFYVVWFVLEYWMK-NR*NSIMCLV*RLRTSWSVVCRRRCSKLAAKSIHHARI 452
R ++ L+Y + N + C RL+T +V + KSIHH +
Sbjct: 69 RHMNRYGLLGEGQNKLDYVLALTVENFLQC---RLQT---IVFKNG----TVKSIHHDHV 118
Query: 453 LIRQRHI 473
LIRQ HI
Sbjct: 119 LIRQHHI 125
>07_03_1358 - 25984897-25984997,25985623-25985650
Length = 42
Score = 46.8 bits (106), Expect = 2e-05
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = +3
Query: 96 FSKTYVTPRRPFEKARLDQELKIIGEYG 179
+ KT+ PRRP+EK RLD ELK++GEYG
Sbjct: 10 YGKTFKKPRRPYEKERLDAELKLVGEYG 37
>08_02_1415 + 26912260-26913075,26913208-26913366,26913521-26913931
Length = 461
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -1
Query: 123 DEVSRTSLKIP-TVLCCSPSWRARTHCSPIRIRKEVMXKG 7
DE S T+ K+ V CSP RA+ C +++ KEV+ G
Sbjct: 264 DEKSGTACKVEYQVEECSPENRAKNECIDVKVTKEVIPCG 303
>08_02_0130 -
12900202-12900277,12901457-12901536,12901654-12901740,
12902475-12902636,12904766-12904855,12904959-12905078,
12905671-12905798,12905873-12906272
Length = 380
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = -2
Query: 395 DAPRSPQSSDQAHNRVSSVFHPVLQYEPDDVEGHYLRTISWGPSPRGEELTSSLTDTSER 216
DA + +A + FH +LQ E V+GH+ + +P G +S D R
Sbjct: 308 DAMNVTMTDRRAGKFEAKFFHKILQEEIGGVKGHFGPINALAFNPDGRSFSSGGEDGYVR 367
Query: 215 V--FDAPYFTL 189
+ FD+ YF +
Sbjct: 368 LHHFDSDYFNI 378
>05_03_0185 +
9348559-9348958,9349560-9349687,9349782-9349808,
9350250-9350369,9350474-9350563,9351206-9351292,
9351410-9351489,9352843-9352918
Length = 335
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = -2
Query: 395 DAPRSPQSSDQAHNRVSSVFHPVLQYEPDDVEGHYLRTISWGPSPRGEELTSSLTDTSER 216
DA + +A + FH +LQ E V+GH+ + +P G +S D R
Sbjct: 263 DAMNVTMTDRRAGKFEAKFFHKILQEEIGGVKGHFGPINALAFNPDGRSFSSGGEDGYVR 322
Query: 215 V--FDAPYFTL 189
+ FD+ YF +
Sbjct: 323 LHHFDSDYFNI 333
>12_02_1042 +
25638585-25638711,25639585-25639745,25639873-25640064,
25640221-25640315,25640645-25640807,25640905-25641015,
25641611-25642741,25642813-25642965,25643060-25643159,
25643333-25643427,25643508-25643681,25643751-25643807,
25643887-25643958,25644151-25644249,25644320-25644451,
25644549-25644722,25644830-25644957,25645065-25645119
Length = 1072
Score = 29.5 bits (63), Expect = 2.5
Identities = 26/68 (38%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Frame = -2
Query: 503 WDVHNLLADTNMPLPDQNSGMM--DGLRS-----QL*TPASADDAPRSPQSSDQAHNRVS 345
W D M LP QN+G+M DG S QL A P+ S Q H V
Sbjct: 39 WRKSGSRVDPPMVLPQQNAGLMEADGSASFIRKLQLSVSDGLPHAAPVPELSTQEHELVK 98
Query: 344 SVFHPVLQ 321
SVF VLQ
Sbjct: 99 SVFQ-VLQ 105
>10_08_0113 - 14896341-14897153
Length = 270
Score = 29.5 bits (63), Expect = 2.5
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -1
Query: 447 WHDGWTSQPALNTCVCRRRSK 385
W W S P+L C CRRR +
Sbjct: 191 WRRSWPSPPSLAGCCCRRRRR 211
>09_02_0318 -
7191763-7191879,7192375-7192494,7192568-7192666,
7192846-7192957,7193058-7193161,7193341-7193520,
7193611-7193880,7194364-7194660,7195283-7195477
Length = 497
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Frame = -2
Query: 287 RTISWGPSPRGEELTSSLTDT------SERVFDAPYFTLVAETVLSDDLQL 153
R I + P+GE+L S + DT +ER + PY + V S D+ L
Sbjct: 237 RIIEFAEKPKGEKLKSMMVDTTILGLDTERAKELPYIASMGIYVFSKDVML 287
>10_08_1052 -
22567937-22568329,22568436-22568669,22568787-22569111,
22569239-22569484,22569576-22569916,22570070-22570150,
22570275-22570394,22570549-22570650,22570900-22571035,
22571210-22571362,22572605-22572906
Length = 810
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +3
Query: 192 REVWRVKYTLARIRKAARELLPSRRRTPRDCSKVMPFYVVWF 317
REV ++ Y ARI + ++L R+R D VMP V F
Sbjct: 280 REVDQIDYYRARISELDKKLASERQRVLNDPKAVMPVAFVTF 321
>10_07_0061 + 12489552-12489674,12490761-12490836,12490916-12490980,
12491089-12491166,12492156-12492236,12492813-12492974,
12493328-12493426,12493509-12494797,12495063-12495286,
12495373-12495500,12495596-12495634,12495724-12497178
Length = 1272
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -2
Query: 461 PDQNSGMMDGLRSQL*TPASADDAPRSPQSSDQAHNRVSSV 339
P +SG M + + + + P SPQ S Q H V+S+
Sbjct: 1213 PQLSSGTMQQVNNNVINHVATPGPPPSPQLSSQTHGSVNSI 1253
>04_04_1335 -
32730516-32730570,32730655-32731154,32731235-32731416,
32732673-32732779,32733364-32733395,32733499-32733542,
32733816-32733977,32734356-32734755
Length = 493
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -2
Query: 476 TNMPLPDQNSGMMDGLRSQL*TPASADDAPRSPQSSD 366
TN PLPD + + D S L + AP +PQ D
Sbjct: 331 TNSPLPDGDDTLADDAISTLPDTEATSSAPATPQIPD 367
>03_02_0915 + 12360079-12360095,12360225-12361353
Length = 381
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = -2
Query: 497 VHNLLADTNMPLPDQNSGMMDGLRSQL*TPASADDAPRSPQSSDQAHNRVSS 342
+ NLLA T +SG D RS + A AP+SP +S + + VSS
Sbjct: 231 IANLLATTTGAAASASSGT-DKTRSSAGSNAPQPAAPQSPAASQASRSNVSS 281
>08_02_0662 +
19789406-19789546,19789646-19789779,19790272-19790476,
19791233-19791367,19792117-19792746,19793180-19793356,
19795175-19795198
Length = 481
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/32 (31%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -1
Query: 489 LACGHEYAFAGSKFWHDGWTSQPALNTC-VCR 397
L CGH + ++ + W D +S+ ++TC +C+
Sbjct: 397 LPCGHRFCYSCIQEWADSLSSRGKVSTCPLCK 428
>07_03_0600 + 19866757-19867218,19867920-19868429
Length = 323
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = -2
Query: 410 PASADDAPRSPQSSDQAHNRVSSVFHPVLQYEPDDVEGHYLRTISWGPSPRGEELTS 240
P AP PQ H + + P Y P + Y ++ GP+P G+E+ S
Sbjct: 76 PPPPQYAPPPPQQFQLPHQQYAP---PPQHYAPPPPQQQYGAQMAGGPAPGGDEIRS 129
>03_04_0181 - 18192774-18192970,18193519-18193882
Length = 186
Score = 27.9 bits (59), Expect = 7.6
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = -1
Query: 288 SNNLLGSFSSRGGAHEQPYGYERACI*RAILHACCGDRTLR*SSTLGQDVPFQKDD 121
S +LGS S +H + + R R +H CG +LR S TLG PF + D
Sbjct: 60 SRAVLGSSSD---SHHRHRNHPRVQRHRRAIHKTCGAISLRPSLTLGFMPPFLRRD 112
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,994,818
Number of Sequences: 37544
Number of extensions: 349222
Number of successful extensions: 966
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 966
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1667659452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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