Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0193
         (658 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK129846-1|BAC85241.1|  236|Homo sapiens protein ( Homo sapiens ...    36   0.13 
AK124805-1|BAC85954.1|  189|Homo sapiens protein ( Homo sapiens ...    35   0.29 
AK128694-1|BAC87575.1|  291|Homo sapiens protein ( Homo sapiens ...    34   0.51 
AK126213-1|BAC86488.1|  262|Homo sapiens protein ( Homo sapiens ...    33   0.68 
BX538093-1|CAD98012.1| 1732|Homo sapiens hypothetical protein pr...    32   1.6  
AB082528-1|BAC02706.2| 1685|Homo sapiens KIAA1997 protein protein.     32   1.6  

>AK129846-1|BAC85241.1|  236|Homo sapiens protein ( Homo sapiens
           cDNA FLJ26336 fis, clone HRT02842. ).
          Length = 236

 Score = 35.9 bits (79), Expect = 0.13
 Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
 Frame = -1

Query: 277 FINLLLCYFIHI-T*QFLCIGLLRPV-TNIFLHSRFSSY-YCNIHIYCITYVYSLVSILC 107
           +  + +  +IHI    ++CI +   + T ++ ++R   + Y +IH Y   YVYS   I C
Sbjct: 8   YTRICIHMYIHIHAYAYICIFIYTHMHTYVYSYTRICIHMYIHIHAYAYIYVYSYTRI-C 66

Query: 106 VHCILFIF 83
           +H  +FI+
Sbjct: 67  IHICIFIY 74



 Score = 34.7 bits (76), Expect = 0.29
 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = -1

Query: 196 IFLHSRFSSY-YCNIHIYCITYVYSLVSILCVHCILFI 86
           IF+++   +Y Y +IH Y   YVYS   I C+H  +FI
Sbjct: 71  IFIYTHMHTYMYIHIHAYAYIYVYSYTRI-CIHICVFI 107


>AK124805-1|BAC85954.1|  189|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42815 fis, clone BRCAN2014143. ).
          Length = 189

 Score = 34.7 bits (76), Expect = 0.29
 Identities = 17/82 (20%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
 Frame = -1

Query: 325 HFCFFLS*FSIMFTNLFINLLLCYFIHIT*QFLCIGL-LRPVTNIFLHSRFSSYYC-NIH 152
           + C ++  +  +   L +   +C +IHI   +LC+ + + P    ++ +   ++ C  +H
Sbjct: 12  YICIYMHVYPCICIYLHVYTYICMYIHIY-PYLCMYVHIYP----YICTCIYTHICMRVH 66

Query: 151 IYCITYVYSLVSILCVHCILFI 86
           +Y   YV + + I+C+H  +++
Sbjct: 67  VYAYMYVRTYIHIMCMHVCVYV 88


>AK128694-1|BAC87575.1|  291|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46861 fis, clone UTERU3011092. ).
          Length = 291

 Score = 33.9 bits (74), Expect = 0.51
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = -1

Query: 196 IFLHSRFSSY-YCNIHIYCITYVYSLVSILCVHCILFI 86
           IF+++   +Y Y ++H Y   YVYS   I C+H  +FI
Sbjct: 91  IFIYTHMHTYMYIHMHAYAYIYVYSYTRI-CIHICIFI 127


>AK126213-1|BAC86488.1|  262|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44225 fis, clone THYMU3006168. ).
          Length = 262

 Score = 33.5 bits (73), Expect = 0.68
 Identities = 28/125 (22%), Positives = 57/125 (45%), Gaps = 4/125 (3%)
 Frame = -1

Query: 451 TYLXQF-RCFSHLFLNIFQRLFHS*TALALIKCIVF*NA*EMVHFCFFLS*FSIMFTNLF 275
           TY+  + R   H++++I           A ++  V+      +H C F+  +  M     
Sbjct: 119 TYVYSYARICIHMYIHIHAYACICMFMYAHMRAYVYSYTRICIHICIFIYTYVCMCVCSC 178

Query: 274 INLLLCYFIHI-T*QFLCI-GLLRPVTNIFLHSRFSSY-YCNIHIYCITYVYSLVSILCV 104
           I++  C +IHI     +C+   +   T +++H     + Y +IHI+  T+ +SL   L +
Sbjct: 179 IHVYTCVYIHIYIGMHICVYSYMHRYTYVYIHIYICIHMYTHIHIH--THNFSLTICLLM 236

Query: 103 HCILF 89
           + + F
Sbjct: 237 NTVCF 241


>BX538093-1|CAD98012.1| 1732|Homo sapiens hypothetical protein
           protein.
          Length = 1732

 Score = 32.3 bits (70), Expect = 1.6
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 8/52 (15%)
 Frame = +3

Query: 192 NIFVTGLSRP-MHKNCQVIWMK*HNNKLMNKLVNII-------ENYERKKQK 323
           N  +   S P +HK CQV+WM+  +N  M K+  ++       E Y  KK+K
Sbjct: 206 NFMINCESNPALHKKCQVLWMEGWSNSSMKKIPEMLFSETGGGEKYNDKKRK 257


>AB082528-1|BAC02706.2| 1685|Homo sapiens KIAA1997 protein protein.
          Length = 1685

 Score = 32.3 bits (70), Expect = 1.6
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 8/52 (15%)
 Frame = +3

Query: 192 NIFVTGLSRP-MHKNCQVIWMK*HNNKLMNKLVNII-------ENYERKKQK 323
           N  +   S P +HK CQV+WM+  +N  M K+  ++       E Y  KK+K
Sbjct: 166 NFMINCESNPALHKKCQVLWMEGWSNSSMKKIPEMLFSETGGGEKYNDKKRK 217


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,174,862
Number of Sequences: 237096
Number of extensions: 1310819
Number of successful extensions: 1891
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1888
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)