Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0185
         (665 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   5.2  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   5.2  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   5.2  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   6.9  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   6.9  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   6.9  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +2

Query: 299 HRPGDCCTRPP 331
           HRPG CC   P
Sbjct: 99  HRPGRCCKTCP 109


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 313 LLHSSSCRCNLWGSNC 360
           +L   +C C+LW  NC
Sbjct: 214 ILAMLNCLCSLWFINC 229


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 313 LLHSSSCRCNLWGSNC 360
           +L   +C C+LW  NC
Sbjct: 214 ILAMLNCLCSLWFINC 229


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +3

Query: 147 YIDPGDDDLEVNLPDYGE 200
           YI PGD  LE   PD  E
Sbjct: 404 YIRPGDTPLEDINPDLAE 421


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 629 FQNFVIISVPKFSKLN 582
           F NFV   +PKFS  N
Sbjct: 309 FSNFVSQHLPKFSAAN 324


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +3

Query: 147 YIDPGDDDLEVNLPDYGE 200
           YI PGD  LE   PD  E
Sbjct: 229 YIRPGDTPLEDINPDLAE 246


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,584
Number of Sequences: 336
Number of extensions: 2629
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)