Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0183
(661 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 187 5e-48
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 187 5e-48
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 187 5e-48
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 187 5e-48
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 187 5e-48
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 187 5e-48
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 187 5e-48
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 187 5e-48
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 187 5e-48
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 187 5e-48
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 186 2e-47
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 117 9e-27
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 105 2e-23
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 105 2e-23
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 104 5e-23
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 104 5e-23
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 94 9e-20
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 91 8e-19
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 66 2e-11
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 39 0.003
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 39 0.003
U23139-8|AAK31491.2| 1051|Caenorhabditis elegans Biotin protein ... 29 2.2
U80844-4|AAB37974.1| 192|Caenorhabditis elegans Hypothetical pr... 29 3.9
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 29 3.9
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 29 3.9
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 29 3.9
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 29 3.9
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 6.8
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 187 bits (456), Expect = 5e-48
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +3
Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 434
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 435 APLNPKANREKMTQIMFETFNTPA 506
APLNPKANREKMTQIMFETFNTPA
Sbjct: 109 APLNPKANREKMTQIMFETFNTPA 132
Score = 105 bits (253), Expect = 2e-23
Identities = 47/51 (92%), Positives = 50/51 (98%)
Frame = +1
Query: 112 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 187 bits (456), Expect = 5e-48
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +3
Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 434
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 435 APLNPKANREKMTQIMFETFNTPA 506
APLNPKANREKMTQIMFETFNTPA
Sbjct: 109 APLNPKANREKMTQIMFETFNTPA 132
Score = 104 bits (250), Expect = 5e-23
Identities = 46/51 (90%), Positives = 50/51 (98%)
Frame = +1
Query: 112 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 187 bits (456), Expect = 5e-48
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +3
Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 434
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 435 APLNPKANREKMTQIMFETFNTPA 506
APLNPKANREKMTQIMFETFNTPA
Sbjct: 109 APLNPKANREKMTQIMFETFNTPA 132
Score = 105 bits (253), Expect = 2e-23
Identities = 47/51 (92%), Positives = 50/51 (98%)
Frame = +1
Query: 112 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 187 bits (456), Expect = 5e-48
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +3
Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 434
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 435 APLNPKANREKMTQIMFETFNTPA 506
APLNPKANREKMTQIMFETFNTPA
Sbjct: 109 APLNPKANREKMTQIMFETFNTPA 132
Score = 105 bits (253), Expect = 2e-23
Identities = 47/51 (92%), Positives = 50/51 (98%)
Frame = +1
Query: 112 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 187 bits (456), Expect = 5e-48
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +3
Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 434
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 435 APLNPKANREKMTQIMFETFNTPA 506
APLNPKANREKMTQIMFETFNTPA
Sbjct: 109 APLNPKANREKMTQIMFETFNTPA 132
Score = 105 bits (253), Expect = 2e-23
Identities = 47/51 (92%), Positives = 50/51 (98%)
Frame = +1
Query: 112 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 187 bits (456), Expect = 5e-48
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +3
Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 434
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 435 APLNPKANREKMTQIMFETFNTPA 506
APLNPKANREKMTQIMFETFNTPA
Sbjct: 109 APLNPKANREKMTQIMFETFNTPA 132
Score = 103 bits (246), Expect = 1e-22
Identities = 44/51 (86%), Positives = 50/51 (98%)
Frame = +1
Query: 112 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 187 bits (456), Expect = 5e-48
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +3
Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 434
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 435 APLNPKANREKMTQIMFETFNTPA 506
APLNPKANREKMTQIMFETFNTPA
Sbjct: 109 APLNPKANREKMTQIMFETFNTPA 132
Score = 105 bits (253), Expect = 2e-23
Identities = 47/51 (92%), Positives = 50/51 (98%)
Frame = +1
Query: 112 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 187 bits (456), Expect = 5e-48
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +3
Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 434
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 5 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 64
Query: 435 APLNPKANREKMTQIMFETFNTPA 506
APLNPKANREKMTQIMFETFNTPA
Sbjct: 65 APLNPKANREKMTQIMFETFNTPA 88
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 187 bits (456), Expect = 5e-48
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +3
Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 434
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 35 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 94
Query: 435 APLNPKANREKMTQIMFETFNTPA 506
APLNPKANREKMTQIMFETFNTPA
Sbjct: 95 APLNPKANREKMTQIMFETFNTPA 118
Score = 67.3 bits (157), Expect = 9e-12
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +1
Query: 166 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 37
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 187 bits (456), Expect = 5e-48
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +3
Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 434
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 435 APLNPKANREKMTQIMFETFNTPA 506
APLNPKANREKMTQIMFETFNTPA
Sbjct: 109 APLNPKANREKMTQIMFETFNTPA 132
Score = 105 bits (253), Expect = 2e-23
Identities = 47/51 (92%), Positives = 50/51 (98%)
Frame = +1
Query: 112 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 186 bits (452), Expect = 2e-47
Identities = 82/84 (97%), Positives = 84/84 (100%)
Frame = +3
Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 434
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTE 107
Query: 435 APLNPKANREKMTQIMFETFNTPA 506
APLNPK+NREKMTQIMFETFNTPA
Sbjct: 108 APLNPKSNREKMTQIMFETFNTPA 131
Score = 99.5 bits (237), Expect = 2e-21
Identities = 44/49 (89%), Positives = 48/49 (97%)
Frame = +1
Query: 118 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 50
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 117 bits (281), Expect = 9e-27
Identities = 48/82 (58%), Positives = 65/82 (79%), Gaps = 1/82 (1%)
Frame = +3
Query: 264 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAP 440
D ++G +A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+AP
Sbjct: 54 DIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAP 113
Query: 441 LNPKANREKMTQIMFETFNTPA 506
LNP NRE+ +I FETFN PA
Sbjct: 114 LNPLKNRERSAEIFFETFNVPA 135
Score = 52.0 bits (119), Expect = 4e-07
Identities = 21/39 (53%), Positives = 29/39 (74%)
Frame = +1
Query: 136 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 252
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAG 49
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 105 bits (253), Expect = 2e-23
Identities = 47/51 (92%), Positives = 50/51 (98%)
Frame = +1
Query: 112 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 85.8 bits (203), Expect = 2e-17
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +3
Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 368
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 105 bits (253), Expect = 2e-23
Identities = 47/51 (92%), Positives = 50/51 (98%)
Frame = +1
Query: 112 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 85.8 bits (203), Expect = 2e-17
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +3
Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 368
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 104 bits (250), Expect = 5e-23
Identities = 46/51 (90%), Positives = 50/51 (98%)
Frame = +1
Query: 112 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 85.8 bits (203), Expect = 2e-17
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +3
Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 368
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 104 bits (250), Expect = 5e-23
Identities = 46/51 (90%), Positives = 50/51 (98%)
Frame = +1
Query: 112 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 80.2 bits (189), Expect = 1e-15
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +3
Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 359
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 93.9 bits (223), Expect = 9e-20
Identities = 44/86 (51%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Frame = +3
Query: 240 RDGRYGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEH 416
R G KD VG+E R +L + YP+++GIV NWDDM +W HTF E L + P+E
Sbjct: 46 RVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKEC 105
Query: 417 PVLLTEAPLNPKANREKMTQIMFETF 494
+LLTE PLNP +NREKM Q+MFE +
Sbjct: 106 KLLLTEPPLNPNSNREKMFQVMFEQY 131
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +1
Query: 136 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 228
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 90.6 bits (215), Expect = 8e-19
Identities = 42/81 (51%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = +3
Query: 264 DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 440
D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLTE P
Sbjct: 64 DFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPP 123
Query: 441 LNPKANREKMTQIMFETFNTP 503
LN NRE +IMFE+FN P
Sbjct: 124 LNTPENREYTAEIMFESFNVP 144
Score = 36.7 bits (81), Expect = 0.015
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 112 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 219
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 66.1 bits (154), Expect = 2e-11
Identities = 28/61 (45%), Positives = 41/61 (67%)
Frame = +3
Query: 324 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 503
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 504 A 506
A
Sbjct: 154 A 154
Score = 33.5 bits (73), Expect = 0.14
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 121 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 219
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Frame = +3
Query: 228 PPSGRDGRYGQKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRV 401
P S ++ +K +V E + +L Y PIE G V NWD ++IW TF + V
Sbjct: 29 PNSIVKAKHEKKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDV 87
Query: 402 APEEHPVLLTEAPLNPKANREKMTQIMFETF 494
+ LT+ A + ++I+F+ F
Sbjct: 88 EASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Frame = +3
Query: 228 PPSGRDGRYGQKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRV 401
P S ++ +K +V E + +L Y PIE G V NWD ++IW TF + V
Sbjct: 29 PNSIVKAKHEKKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDV 87
Query: 402 APEEHPVLLTEAPLNPKANREKMTQIMFETF 494
+ LT+ A + ++I+F+ F
Sbjct: 88 EASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>U23139-8|AAK31491.2| 1051|Caenorhabditis elegans Biotin protein
ligase protein 1,isoform a protein.
Length = 1051
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/66 (25%), Positives = 27/66 (40%)
Frame = +1
Query: 376 IPSTMSCVSPPRNTQSCSXXXXXXXXXXXXXXXXXCSKHSTRPHASAXNRALADASGRPP 555
+PS+ SC PP + SC+ S T + S+ +R D P
Sbjct: 207 LPSSSSCSHPPTTSDSCTSSLAEEAASNSGIYKNQSSASRTNSNGSSTDRRTPDCH---P 263
Query: 556 VSSGLR 573
++SGL+
Sbjct: 264 INSGLK 269
>U80844-4|AAB37974.1| 192|Caenorhabditis elegans Hypothetical
protein C07D8.2 protein.
Length = 192
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 252 YGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 431
+GQ +G A + G L+ P+EH I T + + +L P E P+L+
Sbjct: 66 HGQHGQQLGAPAHTNGGTTRLQQPLEHRIQTTTQGVLQ----GKREQLEQGPTETPLLVQ 121
Query: 432 EAP 440
+AP
Sbjct: 122 QAP 124
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = +2
Query: 395 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ----HARMRRH 517
AC GT SPA GSP PQ D + N Q A +RRH
Sbjct: 1230 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1274
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 191 ASSPAKPALHIPEPLSTTNAATSS 120
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = +2
Query: 395 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ----HARMRRH 517
AC GT SPA GSP PQ D + N Q A +RRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 191 ASSPAKPALHIPEPLSTTNAATSS 120
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = +2
Query: 395 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ----HARMRRH 517
AC GT SPA GSP PQ D + N Q A +RRH
Sbjct: 1231 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1275
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 191 ASSPAKPALHIPEPLSTTNAATSS 120
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = +2
Query: 395 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ----HARMRRH 517
AC GT SPA GSP PQ D + N Q A +RRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 191 ASSPAKPALHIPEPLSTTNAATSS 120
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 166 KAGFAGDDAPRAVFPSIVGRPRHQG 240
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,168,399
Number of Sequences: 27780
Number of extensions: 336774
Number of successful extensions: 1124
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1121
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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