Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0182
         (666 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41531-4|AAR85902.1|  578|Caenorhabditis elegans Guanylyl cyclas...    27   9.1  
U41531-3|AAR85901.1|  702|Caenorhabditis elegans Guanylyl cyclas...    27   9.1  
U41531-2|AAR85900.1|  594|Caenorhabditis elegans Guanylyl cyclas...    27   9.1  
AY275184-1|AAP32292.1|  594|Caenorhabditis elegans soluble guany...    27   9.1  
AY275183-1|AAP32291.1|  578|Caenorhabditis elegans soluble guany...    27   9.1  
AY275182-1|AAP32290.1|  702|Caenorhabditis elegans soluble guany...    27   9.1  

>U41531-4|AAR85902.1|  578|Caenorhabditis elegans Guanylyl cyclase
           protein 31, isoformc protein.
          Length = 578

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +1

Query: 181 MSNHFNNYLYNDQTDNTSYLNLNFSI--SIPVTRFICNHIGEFII 309
           M  HFNN  +N Q   T+Y NLN SI   + +T  I   I  FII
Sbjct: 54  MRLHFNNLDFNRQ--GTAYRNLNDSILEKVKITSDIFFDIFPFII 96


>U41531-3|AAR85901.1|  702|Caenorhabditis elegans Guanylyl cyclase
           protein 31, isoformb protein.
          Length = 702

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +1

Query: 181 MSNHFNNYLYNDQTDNTSYLNLNFSI--SIPVTRFICNHIGEFII 309
           M  HFNN  +N Q   T+Y NLN SI   + +T  I   I  FII
Sbjct: 178 MRLHFNNLDFNRQ--GTAYRNLNDSILEKVKITSDIFFDIFPFII 220


>U41531-2|AAR85900.1|  594|Caenorhabditis elegans Guanylyl cyclase
           protein 31, isoforma protein.
          Length = 594

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +1

Query: 181 MSNHFNNYLYNDQTDNTSYLNLNFSI--SIPVTRFICNHIGEFII 309
           M  HFNN  +N Q   T+Y NLN SI   + +T  I   I  FII
Sbjct: 178 MRLHFNNLDFNRQ--GTAYRNLNDSILEKVKITSDIFFDIFPFII 220


>AY275184-1|AAP32292.1|  594|Caenorhabditis elegans soluble guanylyl
           cyclase GCY-31c protein.
          Length = 594

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +1

Query: 181 MSNHFNNYLYNDQTDNTSYLNLNFSI--SIPVTRFICNHIGEFII 309
           M  HFNN  +N Q   T+Y NLN SI   + +T  I   I  FII
Sbjct: 178 MRLHFNNLDFNRQ--GTAYRNLNDSILEKVKITSDIFFDIFPFII 220


>AY275183-1|AAP32291.1|  578|Caenorhabditis elegans soluble guanylyl
           cyclase GCY-31b protein.
          Length = 578

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +1

Query: 181 MSNHFNNYLYNDQTDNTSYLNLNFSI--SIPVTRFICNHIGEFII 309
           M  HFNN  +N Q   T+Y NLN SI   + +T  I   I  FII
Sbjct: 54  MRLHFNNLDFNRQ--GTAYRNLNDSILEKVKITSDIFFDIFPFII 96


>AY275182-1|AAP32290.1|  702|Caenorhabditis elegans soluble guanylyl
           cyclase GCY-31a protein.
          Length = 702

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +1

Query: 181 MSNHFNNYLYNDQTDNTSYLNLNFSI--SIPVTRFICNHIGEFII 309
           M  HFNN  +N Q   T+Y NLN SI   + +T  I   I  FII
Sbjct: 178 MRLHFNNLDFNRQ--GTAYRNLNDSILEKVKITSDIFFDIFPFII 220


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,988,399
Number of Sequences: 27780
Number of extensions: 207124
Number of successful extensions: 388
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 388
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)