Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0174
         (664 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   5.2  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   6.8  

>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 13/67 (19%), Positives = 27/67 (40%)
 Frame = +2

Query: 53  EGREKMRRPQPDSTGKLQKFLFSKDNMKAAFDLDGLYAECKEKLASFRQNKKDE*TATAQ 232
           E  EK  + +P  +      +  +++ +    L+G+Y         +R+NK+    +   
Sbjct: 74  ESEEKKSKEKPPYSYNALIMMAIRNSPEKRLTLNGIYEYIMRNFPYYRENKQGWQNSIRH 133

Query: 233 VLLLPNC 253
            L L  C
Sbjct: 134 NLSLNKC 140


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 260 YGCNWAVIRPALWR 219
           Y  NWA+ RP + R
Sbjct: 27  YFSNWAIYRPGIGR 40


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,219
Number of Sequences: 336
Number of extensions: 2827
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)