Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0164
         (665 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    23   2.2  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   3.0  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    23   3.0  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   6.9  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   9.1  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   9.1  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   9.1  

>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = -2

Query: 304 LLYCVNSFFAITSLRTSVSNTFV 236
           L+YC  +FFA++ L T ++ + +
Sbjct: 50  LVYCSVTFFALSELLTDLATSIL 72


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 473 IRRHLVIFHGTFSFLLTRYQ 414
           I R L + HG  S +L RYQ
Sbjct: 76  ISRQLRVSHGCVSKILNRYQ 95


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -3

Query: 465 ASRHFSRHIFIPPNSVSAFCVFVKKXIQQVTKF 367
           A +    +IFI    V + C  V++   QV+KF
Sbjct: 362 AGKFLLNYIFIAVGIVGSACTDVEQKFFQVSKF 394


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -3

Query: 69  LFIFVQNIPF*QMLRAPRNK 10
           L IFVQ IPF   +R  R K
Sbjct: 181 LLIFVQQIPFCFFVRVIRLK 200


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 298 TINQYXSYTKVINCEI 345
           T+N Y   + V NCE+
Sbjct: 153 TVNNYQDASNVRNCEL 168


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 298 TINQYXSYTKVINCEI 345
           T+N Y   + V NCE+
Sbjct: 154 TVNNYQDASNVRNCEL 169


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 298 TINQYXSYTKVINCEI 345
           T+N Y   + V NCE+
Sbjct: 154 TVNNYQDASNVRNCEL 169


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,960
Number of Sequences: 336
Number of extensions: 2791
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)