Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0163
(666 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q2F5Q7 Cluster: Isopentenyl-diphosphate delta isomerase... 186 6e-46
UniRef50_Q56CY5 Cluster: IPP:DMAPP isomerase; n=4; Endopterygota... 118 2e-25
UniRef50_A4UU28 Cluster: Isopentenyl diphosphate isomerase; n=1;... 115 1e-24
UniRef50_A0APV5 Cluster: CG5919 protein; n=6; Endopterygota|Rep:... 105 7e-22
UniRef50_UPI00015B59B1 Cluster: PREDICTED: similar to ENSANGP000... 103 5e-21
UniRef50_P15496 Cluster: Isopentenyl-diphosphate Delta-isomerase... 93 5e-18
UniRef50_Q6B8H5 Cluster: Isopentenyl-diphosphate delta-isomerase... 92 1e-17
UniRef50_O81691 Cluster: Isopentenyl pyrophosphate:dimethylallyl... 89 9e-17
UniRef50_Q1ENB0 Cluster: Isopentenyl-diphosphate delta-isomerase... 89 1e-16
UniRef50_UPI0000E22286 Cluster: PREDICTED: similar to isopenteny... 88 2e-16
UniRef50_Q13907 Cluster: Isopentenyl-diphosphate Delta-isomerase... 88 2e-16
UniRef50_P93355 Cluster: Isopentenyl pyrophosphate isomerase; n=... 87 5e-16
UniRef50_Q42553 Cluster: Isopentenyl-diphosphate Delta-isomerase... 86 8e-16
UniRef50_Q9BXS1 Cluster: Isopentenyl-diphosphate Delta-isomerase... 79 1e-13
UniRef50_UPI0000DA400D Cluster: PREDICTED: similar to isopenteny... 78 2e-13
UniRef50_Q11XA5 Cluster: Isopentenyl-diphosphate delta-isomerase... 76 9e-13
UniRef50_Q9BI81 Cluster: Isopentenyl diphosphate isomerase prote... 76 9e-13
UniRef50_Q5KPJ7 Cluster: Isopentenyl-diphosphate delta-isomerase... 75 2e-12
UniRef50_Q5C0D7 Cluster: SJCHGC09251 protein; n=1; Schistosoma j... 71 3e-11
UniRef50_O42641 Cluster: Isopentenyl-diphosphate Delta-isomerase... 71 3e-11
UniRef50_Q8KZ66 Cluster: Isopentenyl-diphosphate delta-isomerase... 69 1e-10
UniRef50_A2EXQ9 Cluster: Isopentenyl-diphosphate delta-isomerase... 69 1e-10
UniRef50_Q4J492 Cluster: Isopentenyl-diphosphate delta-isomerase... 69 1e-10
UniRef50_UPI00006CCBBC Cluster: isopentenyl-diphosphate delta-is... 68 2e-10
UniRef50_Q8RTW6 Cluster: MutT/nudix family protein; n=2; Proteob... 68 2e-10
UniRef50_A1ZX54 Cluster: Isopentenyl-diphosphate delta-isomerase... 68 2e-10
UniRef50_Q2H0Q5 Cluster: Putative uncharacterized protein; n=1; ... 68 2e-10
UniRef50_Q7N0A6 Cluster: Isopentenyl-diphosphate Delta-isomerase... 66 5e-10
UniRef50_Q8SSI5 Cluster: ISOPENTENYL-DIPHOSPHATE-DELTA-ISOMERASE... 65 1e-09
UniRef50_A4ACQ3 Cluster: Isopentenyl-diphosphate delta-isomerase... 64 4e-09
UniRef50_Q7N1V4 Cluster: Isopentenyl-diphosphate Delta-isomerase... 62 9e-09
UniRef50_Q82MJ7 Cluster: Isopentenyl-diphosphate Delta-isomerase... 62 2e-08
UniRef50_Q7QZN2 Cluster: GLP_680_42339_43049; n=1; Giardia lambl... 61 2e-08
UniRef50_Q8FND7 Cluster: Isopentenyl-diphosphate Delta-isomerase... 60 5e-08
UniRef50_Q2S1C1 Cluster: Isopentenyl-diphosphate delta-isomerase... 58 1e-07
UniRef50_Q6J177 Cluster: Putative isopentenyl diphosphate isomer... 58 3e-07
UniRef50_Q9KWD1 Cluster: Isopentenyl-diphosphate Delta-isomerase... 57 3e-07
UniRef50_Q5NWG5 Cluster: Isopentenyl-diphosphate Delta-isomerase... 57 3e-07
UniRef50_Q8NN99 Cluster: Isopentenyl-diphosphate Delta-isomerase... 56 8e-07
UniRef50_UPI0000E2279B Cluster: PREDICTED: similar to isopenteny... 56 1e-06
UniRef50_Q11MV0 Cluster: Isopentenyl-diphosphate delta-isomerase... 56 1e-06
UniRef50_A1WXH5 Cluster: Isopentenyl-diphosphate delta-isomerase... 56 1e-06
UniRef50_Q6D3F5 Cluster: Isopentenyl-diphosphate Delta-isomerase... 55 1e-06
UniRef50_A0CI91 Cluster: Chromosome undetermined scaffold_19, wh... 53 5e-06
UniRef50_A7DRD6 Cluster: Isopentenyl-diphosphate delta-isomerase... 53 5e-06
UniRef50_UPI00015535B1 Cluster: PREDICTED: hypothetical protein;... 53 7e-06
UniRef50_Q83DT5 Cluster: Diphosphomevalonate decarboxylase; n=4;... 53 7e-06
UniRef50_A0RY18 Cluster: Isopentenyl-diphosphate delta-isomerase... 52 9e-06
UniRef50_Q5YYB6 Cluster: Isopentenyl-diphosphate Delta-isomerase... 52 1e-05
UniRef50_Q8A0P9 Cluster: Putative NTP pyrophosphohydrolase; n=8;... 51 2e-05
UniRef50_P72002 Cluster: Isopentenyl-diphosphate Delta-isomerase... 50 4e-05
UniRef50_Q2J5A6 Cluster: Isopentenyl-diphosphate delta-isomerase... 50 5e-05
UniRef50_Q6A5Z1 Cluster: Isopentenyl-diphosphate Delta-isomerase... 48 2e-04
UniRef50_Q83MJ9 Cluster: Isopentenyl-diphosphate Delta-isomerase... 48 3e-04
UniRef50_Q1JYN2 Cluster: NUDIX hydrolase; n=2; Desulfuromonadale... 47 4e-04
UniRef50_A6CD79 Cluster: Putative uncharacterized protein; n=1; ... 47 5e-04
UniRef50_A7CUZ5 Cluster: NUDIX hydrolase; n=1; Opitutaceae bacte... 45 0.001
UniRef50_Q9HUW9 Cluster: Uncharacterized Nudix hydrolase PA4841;... 44 0.003
UniRef50_Q28W27 Cluster: Isopentenyl-diphosphate delta-isomerase... 41 0.031
UniRef50_Q0SK61 Cluster: Isopentenyl-diphosphate delta-isomerase... 41 0.031
UniRef50_A1AU24 Cluster: NUDIX hydrolase; n=1; Pelobacter propio... 40 0.041
UniRef50_Q6LUX5 Cluster: Isopentenyl-diphosphate Delta-isomerase... 40 0.041
UniRef50_UPI0000E0E5DB Cluster: hypothetical isopentenyldiphosph... 40 0.054
UniRef50_Q08JB5 Cluster: Putative uncharacterized protein orf153... 40 0.054
UniRef50_A3I6L2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.16
UniRef50_Q9HP40 Cluster: Isopentenyl-diphosphate Delta-isomerase... 38 0.16
UniRef50_Q2UHM3 Cluster: Isopentenyl pyrophosphate:dimethylallyl... 38 0.22
UniRef50_Q0TXR0 Cluster: Predicted protein; n=1; Phaeosphaeria n... 37 0.38
UniRef50_A6VUC2 Cluster: NUDIX hydrolase precursor; n=2; Marinom... 36 0.88
UniRef50_Q73N41 Cluster: Conserved domain protein; n=1; Treponem... 36 1.2
UniRef50_Q5LWT6 Cluster: Isopentenyl-diphosphate Delta-isomerase... 36 1.2
UniRef50_A6PL45 Cluster: NUDIX hydrolase; n=1; Victivallis vaden... 35 1.5
UniRef50_Q03T85 Cluster: NUDIX family hydrolase; n=1; Lactobacil... 35 2.0
UniRef50_A3DFU0 Cluster: NUDIX hydrolase; n=1; Clostridium therm... 34 2.7
UniRef50_A7HJY4 Cluster: Citrate transporter; n=1; Fervidobacter... 34 3.5
UniRef50_Q1QTN6 Cluster: NUDIX hydrolase; n=1; Chromohalobacter ... 33 4.7
UniRef50_A7AM45 Cluster: Hydrolase, NUDIX family protein; n=1; B... 33 4.7
UniRef50_Q4SMK5 Cluster: Chromosome 18 SCAF14547, whole genome s... 33 6.2
UniRef50_A7RGX4 Cluster: Predicted protein; n=1; Nematostella ve... 33 8.2
>UniRef50_Q2F5Q7 Cluster: Isopentenyl-diphosphate delta isomerase;
n=2; Bombyx mori|Rep: Isopentenyl-diphosphate delta
isomerase - Bombyx mori (Silk moth)
Length = 248
Score = 186 bits (452), Expect = 6e-46
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +2
Query: 254 NKDGLELAQAEALDKDICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRG 433
+KDGLELAQAEALDKDICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRG
Sbjct: 32 DKDGLELAQAEALDKDICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRG 91
Query: 434 DMFLQRRSSQKVTYPDYYTNACCSH 508
DMFLQRRSSQKVTYPDYYTNACCSH
Sbjct: 92 DMFLQRRSSQKVTYPDYYTNACCSH 116
Score = 65.3 bits (152), Expect = 1e-09
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +3
Query: 162 MLVRKLTRSLWSTLRVEKRFLASEPVKPATL 254
MLVRKLTRSLWSTLRVEKRFLASEPVKPATL
Sbjct: 1 MLVRKLTRSLWSTLRVEKRFLASEPVKPATL 31
>UniRef50_Q56CY5 Cluster: IPP:DMAPP isomerase; n=4;
Endopterygota|Rep: IPP:DMAPP isomerase - Dendroctonus
jeffreyi (Jeffrey pine beetle)
Length = 252
Score = 118 bits (283), Expect = 2e-25
Identities = 49/80 (61%), Positives = 65/80 (81%)
Frame = +2
Query: 278 QAEALDKDICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQRRS 457
Q EA++K+ C LVD+ D G A+KR+CH V DG++ LHRAFSVFLFN++GD+ LQ+RS
Sbjct: 35 QDEAMEKEQCFLVDDNDIVTGQASKRDCHLVQEDGNIPLHRAFSVFLFNQKGDLLLQKRS 94
Query: 458 SQKVTYPDYYTNACCSHHXT 517
S+K+TYPD+YTN+CCSH T
Sbjct: 95 SEKITYPDHYTNSCCSHPLT 114
>UniRef50_A4UU28 Cluster: Isopentenyl diphosphate isomerase; n=1;
Adonis aestivalis var. palaestina|Rep: Isopentenyl
diphosphate isomerase - Adonis aestivalis var.
palaestina
Length = 244
Score = 115 bits (276), Expect = 1e-24
Identities = 49/81 (60%), Positives = 61/81 (75%)
Frame = +2
Query: 266 LELAQAEALDKDICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGDMFL 445
++ AQ L +D C+LVD+ D IG K CH V PDG++LLHRAFSVFLFN +GD+ L
Sbjct: 26 MQHAQLSDLPEDQCILVDKNDKVIGEEAKSTCHIVSPDGNLLLHRAFSVFLFNSKGDLLL 85
Query: 446 QRRSSQKVTYPDYYTNACCSH 508
Q+R+S KVTYPD+YTN CCSH
Sbjct: 86 QKRASAKVTYPDHYTNTCCSH 106
>UniRef50_A0APV5 Cluster: CG5919 protein; n=6; Endopterygota|Rep:
CG5919 protein - Drosophila melanogaster (Fruit fly)
Length = 256
Score = 105 bits (253), Expect = 7e-22
Identities = 50/93 (53%), Positives = 66/93 (70%), Gaps = 1/93 (1%)
Frame = +2
Query: 278 QAEALDKDICLLVDEKDNFIGTATKRECHKVGPD-GDVLLHRAFSVFLFNKRGDMFLQRR 454
QA AL K+ C+LVD D IG A+K +CH+V P+ DV LHRAFSVFLFN +G+M +Q+R
Sbjct: 43 QAHAL-KEQCILVDANDQAIGAASKADCHRVHPETNDVKLHRAFSVFLFNSQGEMLVQKR 101
Query: 455 SSQKVTYPDYYTNACCSHHXT*MRSPRKSYGSQ 553
SS K+T+P+ YTNACCSH + R+ +Q
Sbjct: 102 SSHKITFPNTYTNACCSHPLYEIEQERQERNAQ 134
>UniRef50_UPI00015B59B1 Cluster: PREDICTED: similar to
ENSANGP00000011643; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000011643 - Nasonia
vitripennis
Length = 290
Score = 103 bits (246), Expect = 5e-21
Identities = 43/77 (55%), Positives = 58/77 (75%)
Frame = +2
Query: 278 QAEALDKDICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQRRS 457
Q AL++ C+LVDE D +G ATK+ CH + DG + LHRAFSVFLFN +GD+ +Q+RS
Sbjct: 76 QRTALEER-CILVDELDRPVGEATKKHCHLIAKDGSIPLHRAFSVFLFNGKGDLLIQKRS 134
Query: 458 SQKVTYPDYYTNACCSH 508
+ K+T+P +YTN CCSH
Sbjct: 135 ATKITFPGFYTNTCCSH 151
>UniRef50_P15496 Cluster: Isopentenyl-diphosphate Delta-isomerase;
n=31; Eukaryota|Rep: Isopentenyl-diphosphate
Delta-isomerase - Saccharomyces cerevisiae (Baker's
yeast)
Length = 288
Score = 93.1 bits (221), Expect = 5e-18
Identities = 41/90 (45%), Positives = 62/90 (68%)
Frame = +2
Query: 239 ETCYSNKDGLELAQAEALDKDICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFL 418
ETC+S D ++ L + C+++D DN IG TK+ CH + LLHRAFSVF+
Sbjct: 56 ETCFSGHDEEQIK----LMNENCIVLDWDDNAIGAGTKKVCHLMENIEKGLLHRAFSVFI 111
Query: 419 FNKRGDMFLQRRSSQKVTYPDYYTNACCSH 508
FN++G++ LQ+R+++K+T+PD +TN CCSH
Sbjct: 112 FNEQGELLLQQRATEKITFPDLWTNTCCSH 141
>UniRef50_Q6B8H5 Cluster: Isopentenyl-diphosphate delta-isomerase;
n=1; Ixodes pacificus|Rep: Isopentenyl-diphosphate
delta-isomerase - Ixodes pacificus (western blacklegged
tick)
Length = 265
Score = 92.3 bits (219), Expect = 1e-17
Identities = 39/85 (45%), Positives = 58/85 (68%)
Frame = +2
Query: 254 NKDGLELAQAEALDKDICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRG 433
N D + Q + L++ C+LVDE+D +G+ +K++CH + LLHRAFSVFLFN +
Sbjct: 37 NLDSFDPTQVQLLEEQ-CILVDEQDRVLGSGSKKDCHLMTNINKGLLHRAFSVFLFNSKD 95
Query: 434 DMFLQRRSSQKVTYPDYYTNACCSH 508
++ LQ+RS K+T+P +TN CCSH
Sbjct: 96 ELLLQQRSDAKITFPGRFTNTCCSH 120
>UniRef50_O81691 Cluster: Isopentenyl pyrophosphate:dimethylallyl
pyrophosphate isomerase; n=6; Chlorophyta|Rep:
Isopentenyl pyrophosphate:dimethylallyl pyrophosphate
isomerase - Chlamydomonas reinhardtii
Length = 307
Score = 89.0 bits (211), Expect = 9e-17
Identities = 42/89 (47%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Frame = +2
Query: 251 SNKDGLELAQAEALDKDICLLVDEKDNFIGTATKRECHKV-GPDGDVL--LHRAFSVFLF 421
S +G L+Q + + +D CL+VDE+D +GTA K +CH+ G LHRAFSVFLF
Sbjct: 59 STWEGTGLSQDDFMQRDECLVVDEQDRLLGTANKYDCHRFEAAKGQPCGRLHRAFSVFLF 118
Query: 422 NKRGDMFLQRRSSQKVTYPDYYTNACCSH 508
+ G + LQ+R++ KVT+P +TN CCSH
Sbjct: 119 SPDGRLLLQQRAASKVTFPGVWTNTCCSH 147
>UniRef50_Q1ENB0 Cluster: Isopentenyl-diphosphate delta-isomerase II
precursor; n=1; Guillardia theta|Rep:
Isopentenyl-diphosphate delta-isomerase II precursor -
Guillardia theta (Cryptomonas phi)
Length = 215
Score = 88.6 bits (210), Expect = 1e-16
Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Frame = +2
Query: 251 SNKDGLELAQAEALDKDICLLVDEKDNFIGTATKRECHKV-GPDGDVLLHRAFSVFLFNK 427
S K + Q LD D C++V++KD +G +K+ CH + LHRAFS+FLFN
Sbjct: 82 STKMQYDQEQLRLLDSDECIIVNDKDEVLGHGSKKYCHLMENISAGKALHRAFSIFLFNG 141
Query: 428 RGDMFLQRRSSQKVTYPDYYTNACCSH 508
RG++ LQ+RSS K+ +P+ +TN CCSH
Sbjct: 142 RGELLLQKRSSDKILFPNRWTNTCCSH 168
>UniRef50_UPI0000E22286 Cluster: PREDICTED: similar to
isopentenyl-diphosphate delta isomerase; n=1; Pan
troglodytes|Rep: PREDICTED: similar to
isopentenyl-diphosphate delta isomerase - Pan
troglodytes
Length = 385
Score = 88.2 bits (209), Expect = 2e-16
Identities = 41/85 (48%), Positives = 54/85 (63%)
Frame = +2
Query: 254 NKDGLELAQAEALDKDICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRG 433
N + L+ Q + L ++C+L+DE DN IG TK+ CH LLHRAFSVFLFN
Sbjct: 215 NTNHLDKQQVQLL-AEMCILIDENDNKIGAETKKNCHLNENIEKGLLHRAFSVFLFNTEN 273
Query: 434 DMFLQRRSSQKVTYPDYYTNACCSH 508
+ LQ+RS K+T+P +TN CCSH
Sbjct: 274 KLLLQQRSDAKITFPGCFTNTCCSH 298
>UniRef50_Q13907 Cluster: Isopentenyl-diphosphate Delta-isomerase 1;
n=25; Eumetazoa|Rep: Isopentenyl-diphosphate
Delta-isomerase 1 - Homo sapiens (Human)
Length = 227
Score = 88.2 bits (209), Expect = 2e-16
Identities = 41/85 (48%), Positives = 54/85 (63%)
Frame = +2
Query: 254 NKDGLELAQAEALDKDICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRG 433
N + L+ Q + L ++C+L+DE DN IG TK+ CH LLHRAFSVFLFN
Sbjct: 5 NTNHLDKQQVQLL-AEMCILIDENDNKIGAETKKNCHLNENIEKGLLHRAFSVFLFNTEN 63
Query: 434 DMFLQRRSSQKVTYPDYYTNACCSH 508
+ LQ+RS K+T+P +TN CCSH
Sbjct: 64 KLLLQQRSDAKITFPGCFTNTCCSH 88
>UniRef50_P93355 Cluster: Isopentenyl pyrophosphate isomerase; n=1;
Nicotiana tabacum|Rep: Isopentenyl pyrophosphate
isomerase - Nicotiana tabacum (Common tobacco)
Length = 219
Score = 86.6 bits (205), Expect = 5e-16
Identities = 39/82 (47%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
Frame = +2
Query: 266 LELAQAEALDKDICLLVDEKDNFIGTATKRECHKVGP-DGDVLLHRAFSVFLFNKRGDMF 442
++ Q + +D C+LVDE D +G TK CH + + + LLHRAFSVFLFN + ++
Sbjct: 65 MDAVQRRLMFEDECILVDENDRVVGHDTKYNCHLMEKIEAENLLHRAFSVFLFNSKYELL 124
Query: 443 LQRRSSQKVTYPDYYTNACCSH 508
LQ+RS+ KVT+P +TN CCSH
Sbjct: 125 LQQRSATKVTFPLVWTNTCCSH 146
>UniRef50_Q42553 Cluster: Isopentenyl-diphosphate Delta-isomerase
II; n=63; Magnoliophyta|Rep: Isopentenyl-diphosphate
Delta-isomerase II - Arabidopsis thaliana (Mouse-ear
cress)
Length = 284
Score = 85.8 bits (203), Expect = 8e-16
Identities = 39/83 (46%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Frame = +2
Query: 263 GLELAQAEALDKDICLLVDEKDNFIGTATKRECHKV-GPDGDVLLHRAFSVFLFNKRGDM 439
G++ Q + +D C+LVDE D +G +K CH + + LLHRAFSVFLFN + ++
Sbjct: 59 GMDAVQRRLMFEDECILVDETDRVVGHDSKYNCHLMENIEAKNLLHRAFSVFLFNSKYEL 118
Query: 440 FLQRRSSQKVTYPDYYTNACCSH 508
LQ+RS+ KVT+P +TN CCSH
Sbjct: 119 LLQQRSNTKVTFPLVWTNTCCSH 141
>UniRef50_Q9BXS1 Cluster: Isopentenyl-diphosphate Delta-isomerase 2;
n=30; Euteleostomi|Rep: Isopentenyl-diphosphate
Delta-isomerase 2 - Homo sapiens (Human)
Length = 227
Score = 78.6 bits (185), Expect = 1e-13
Identities = 38/85 (44%), Positives = 54/85 (63%)
Frame = +2
Query: 254 NKDGLELAQAEALDKDICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRG 433
N D ++ Q + L+ ++ ++VDE D IG TKR CH LLHRAFSV LFN +
Sbjct: 5 NLDWVDRRQLQRLE-EMLIVVDENDKVIGADTKRNCHLNENIEKGLLHRAFSVVLFNTKN 63
Query: 434 DMFLQRRSSQKVTYPDYYTNACCSH 508
+ +Q+RS KVT+P Y+T++C SH
Sbjct: 64 RILIQQRSDTKVTFPGYFTDSCSSH 88
>UniRef50_UPI0000DA400D Cluster: PREDICTED: similar to
isopentenyl-diphosphate delta isomerase 2; n=1; Rattus
norvegicus|Rep: PREDICTED: similar to
isopentenyl-diphosphate delta isomerase 2 - Rattus
norvegicus
Length = 223
Score = 77.8 bits (183), Expect = 2e-13
Identities = 40/87 (45%), Positives = 54/87 (62%), Gaps = 4/87 (4%)
Frame = +2
Query: 260 DGLELAQAEALDKDICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGDM 439
D ++ Q E LD ++ ++VDE D IG TKR CH+ LLHRAFSV LFN +
Sbjct: 7 DWIDKHQLERLD-EMMIVVDENDKVIGADTKRNCHQNKNIEKGLLHRAFSVALFNSEKKV 65
Query: 440 FLQRRSSQKVTYPDY----YTNACCSH 508
+QRR+ K+T+P Y YT++CCSH
Sbjct: 66 LIQRRADTKLTFPGYYTDSYTDSCCSH 92
>UniRef50_Q11XA5 Cluster: Isopentenyl-diphosphate delta-isomerase;
n=9; Bacteroidetes|Rep: Isopentenyl-diphosphate
delta-isomerase - Cytophaga hutchinsonii (strain ATCC
33406 / NCIMB 9469)
Length = 177
Score = 75.8 bits (178), Expect = 9e-13
Identities = 36/71 (50%), Positives = 49/71 (69%)
Frame = +2
Query: 296 KDICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQRRSSQKVTY 475
++ LLVDE+DN IG+ K E H+ G LLHRAFSVF+FN +G++ LQ+R++ K
Sbjct: 4 EEYVLLVDEQDNEIGSMEKMEAHRKG-----LLHRAFSVFIFNTKGELLLQQRAASKYHS 58
Query: 476 PDYYTNACCSH 508
P +TN CCSH
Sbjct: 59 PLKWTNTCCSH 69
>UniRef50_Q9BI81 Cluster: Isopentenyl diphosphate isomerase protein
1; n=2; Caenorhabditis|Rep: Isopentenyl diphosphate
isomerase protein 1 - Caenorhabditis elegans
Length = 236
Score = 75.8 bits (178), Expect = 9e-13
Identities = 34/78 (43%), Positives = 49/78 (62%)
Frame = +2
Query: 275 AQAEALDKDICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQRR 454
AQ ++ C+ VDE D IG +KRE H ++LHRAFSVF F + +Q+R
Sbjct: 25 AQQVEYMREQCINVDENDRIIGGVSKREAHS---SYQLVLHRAFSVFSFTSDNKLLMQKR 81
Query: 455 SSQKVTYPDYYTNACCSH 508
S++K+T+P+ +TN CCSH
Sbjct: 82 SAEKITFPNLWTNTCCSH 99
>UniRef50_Q5KPJ7 Cluster: Isopentenyl-diphosphate delta-isomerase,
putative; n=1; Filobasidiella neoformans|Rep:
Isopentenyl-diphosphate delta-isomerase, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 265
Score = 74.5 bits (175), Expect = 2e-12
Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 NKDGLELAQAEALDKDICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKR- 430
N D + Q +++ C+LV +D G +K+ CH + LLHRAFSVFLF
Sbjct: 24 NLDSYDEEQVRLMEER-CILVTPEDKVYGEGSKKVCHLMSNINTGLLHRAFSVFLFRPAD 82
Query: 431 GDMFLQRRSSQKVTYPDYYTNACCSH 508
G + LQ+R+ +K+T+P +TN CCSH
Sbjct: 83 GRLLLQKRADEKITFPSMWTNTCCSH 108
>UniRef50_Q5C0D7 Cluster: SJCHGC09251 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09251 protein - Schistosoma
japonicum (Blood fluke)
Length = 204
Score = 70.9 bits (166), Expect = 3e-11
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 9/87 (10%)
Frame = +2
Query: 275 AQAEALDKDICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGD------ 436
+Q++ + + C+LVDE D +G A K++CH+V G LLHRAFS+FLF +
Sbjct: 30 SQSKYMLNEFCILVDESDCVLGFANKKKCHEV-LSGKSLLHRAFSLFLFREDTSNESSGS 88
Query: 437 ---MFLQRRSSQKVTYPDYYTNACCSH 508
+ +Q+RS K+T+P ++N CCSH
Sbjct: 89 SLKLLVQKRSPNKLTFPSMWSNTCCSH 115
>UniRef50_O42641 Cluster: Isopentenyl-diphosphate Delta-isomerase;
n=5; Dikarya|Rep: Isopentenyl-diphosphate
Delta-isomerase - Phaffia rhodozyma (Yeast)
(Xanthophyllomyces dendrorhous)
Length = 251
Score = 70.5 bits (165), Expect = 3e-11
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Frame = +2
Query: 290 LDKDICLLVDEKDNFIGTATKRECH---KVGPDGDVLLHRAFSVFLFNKR-GDMFLQRRS 457
L ++ C+LV+ D G A+K+ CH + D LLHRAFSVFLF G + LQRR+
Sbjct: 29 LMEERCILVNPDDVAYGEASKKTCHLMSNINAPKD-LLHRAFSVFLFRPSDGALLLQRRA 87
Query: 458 SQKVTYPDYYTNACCSH 508
+K+T+P +TN CCSH
Sbjct: 88 DEKITFPGMWTNTCCSH 104
>UniRef50_Q8KZ66 Cluster: Isopentenyl-diphosphate delta-isomerase,
putative; n=1; uncultured proteobacterium|Rep:
Isopentenyl-diphosphate delta-isomerase, putative -
uncultured proteobacterium
Length = 192
Score = 68.9 bits (161), Expect = 1e-10
Identities = 33/74 (44%), Positives = 45/74 (60%)
Frame = +2
Query: 287 ALDKDICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQRRSSQK 466
+ D + +LVD D IG K H+ G+ LHRAFS+FL N G++ LQ+RSS K
Sbjct: 9 SFDNEPLMLVDSNDVVIGYEEKASAHQ----GEGQLHRAFSIFLLNDHGEVLLQQRSSLK 64
Query: 467 VTYPDYYTNACCSH 508
+P Y++N CCSH
Sbjct: 65 PLWPMYWSNTCCSH 78
>UniRef50_A2EXQ9 Cluster: Isopentenyl-diphosphate delta-isomerase,
type 1 family protein; n=2; Trichomonas vaginalis
G3|Rep: Isopentenyl-diphosphate delta-isomerase, type 1
family protein - Trichomonas vaginalis G3
Length = 209
Score = 68.9 bits (161), Expect = 1e-10
Identities = 33/81 (40%), Positives = 48/81 (59%)
Frame = +2
Query: 266 LELAQAEALDKDICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGDMFL 445
+ + Q + +LVD+ DN +G A K H+ + LLHRAFS+FLF+ + L
Sbjct: 1 MSVEQQNQMQNAHVVLVDKDDNPVGEADKYTAHRT--EKGPLLHRAFSLFLFDSERRLLL 58
Query: 446 QRRSSQKVTYPDYYTNACCSH 508
Q+RSS K+T+P + N CCSH
Sbjct: 59 QQRSSNKITFPLIWANTCCSH 79
>UniRef50_Q4J492 Cluster: Isopentenyl-diphosphate delta-isomerase;
n=1; Azotobacter vinelandii AvOP|Rep:
Isopentenyl-diphosphate delta-isomerase - Azotobacter
vinelandii AvOP
Length = 213
Score = 68.5 bits (160), Expect = 1e-10
Identities = 32/80 (40%), Positives = 50/80 (62%)
Frame = +2
Query: 269 ELAQAEALDKDICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQ 448
+L + + + +LVD D IG K H+ G LLHRAFS+F+FN+RG++ LQ
Sbjct: 30 QLRNEVSFNDEPLVLVDAHDREIGFLDKASAHQ----GQGLLHRAFSLFVFNRRGELLLQ 85
Query: 449 RRSSQKVTYPDYYTNACCSH 508
+R++ K +P +++N CCSH
Sbjct: 86 QRAAGKRLWPGFWSNTCCSH 105
>UniRef50_UPI00006CCBBC Cluster: isopentenyl-diphosphate
delta-isomerase, type 1 family protein; n=1; Tetrahymena
thermophila SB210|Rep: isopentenyl-diphosphate
delta-isomerase, type 1 family protein - Tetrahymena
thermophila SB210
Length = 249
Score = 68.1 bits (159), Expect = 2e-10
Identities = 32/91 (35%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Frame = +2
Query: 242 TCYSNKDGLELAQAEALDKDICLLVDEKDNFIGTATKRECH--KVGPDGDVLLHRAFSVF 415
T S + +Q + L + + +LV+ +D+ +G K++ H + + HRAFS+F
Sbjct: 18 TSKSASQAMHQSQEQTLSQKL-ILVNYQDDVVGQIDKKKAHLNEYIFSQEAKPHRAFSIF 76
Query: 416 LFNKRGDMFLQRRSSQKVTYPDYYTNACCSH 508
LFN + + LQ+RS K+T+P+++TN CCSH
Sbjct: 77 LFNDKSQLLLQKRSQIKITFPNHWTNTCCSH 107
>UniRef50_Q8RTW6 Cluster: MutT/nudix family protein; n=2;
Proteobacteria|Rep: MutT/nudix family protein -
uncultured proteobacterium
Length = 197
Score = 68.1 bits (159), Expect = 2e-10
Identities = 32/77 (41%), Positives = 48/77 (62%)
Frame = +2
Query: 287 ALDKDICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQRRSSQK 466
+ D + +LVD D IG A+K++ H P G LHRAFS+FL+ + L +RS +K
Sbjct: 9 SFDSEDLILVDSLDQVIGNASKKQVHL--PGGQ--LHRAFSIFLYANNQQVMLHKRSLEK 64
Query: 467 VTYPDYYTNACCSHHXT 517
+P+++TN+CCSH T
Sbjct: 65 PLWPNFWTNSCCSHPRT 81
>UniRef50_A1ZX54 Cluster: Isopentenyl-diphosphate delta-isomerase,
type 1; n=9; Bacteria|Rep: Isopentenyl-diphosphate
delta-isomerase, type 1 - Microscilla marina ATCC 23134
Length = 175
Score = 68.1 bits (159), Expect = 2e-10
Identities = 32/73 (43%), Positives = 47/73 (64%)
Frame = +2
Query: 290 LDKDICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQRRSSQKV 469
+ ++ +LVD++DN +GT K E H+ G LLHRAFSVF+FN + ++ LQ+R+ K
Sbjct: 1 MQEEQVILVDKQDNELGTMNKLEAHQKG-----LLHRAFSVFVFNDQNELMLQQRAQHKY 55
Query: 470 TYPDYYTNACCSH 508
+TN CCSH
Sbjct: 56 HSGGLWTNTCCSH 68
>UniRef50_Q2H0Q5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 239
Score = 67.7 bits (158), Expect = 2e-10
Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 10/117 (8%)
Frame = +2
Query: 188 TVEHPKSREKIFG-FRTCETCYSNKDGLELAQAEALDKDICLLVDEKDNFIGTATKRECH 364
T P + + I F +T + +G + Q +D ++C+++DE D IGTA+K+ C
Sbjct: 10 TTAEPITADSILRLFPDIDTSGAALEGHDEEQIRLMD-EVCIVLDENDLPIGTASKKLCK 68
Query: 365 ---------KVGPDGDVLLHRAFSVFLFNKRGDMFLQRRSSQKVTYPDYYTNACCSH 508
+ + + FSVF+FN + ++ LQ+R+S+K+T+PD TN CCSH
Sbjct: 69 CSCYATPETERWGENEASCTEPFSVFIFNDKNELLLQQRASEKITFPDMGTNTCCSH 125
>UniRef50_Q7N0A6 Cluster: Isopentenyl-diphosphate Delta-isomerase 2;
n=3; Proteobacteria|Rep: Isopentenyl-diphosphate
Delta-isomerase 2 - Photorhabdus luminescens subsp.
laumondii
Length = 177
Score = 66.5 bits (155), Expect = 5e-10
Identities = 30/70 (42%), Positives = 48/70 (68%)
Frame = +2
Query: 299 DICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQRRSSQKVTYP 478
+I +LVD+ DN IG+A K + H+ G +LHRAFS+F+F+ +G++ LQ+R++ K
Sbjct: 3 EILVLVDKHDNPIGSAGKADIHQKG-----MLHRAFSIFVFDNKGNLLLQKRAATKYHSA 57
Query: 479 DYYTNACCSH 508
+TN+CC H
Sbjct: 58 GLWTNSCCGH 67
>UniRef50_Q8SSI5 Cluster: ISOPENTENYL-DIPHOSPHATE-DELTA-ISOMERASE
II; n=1; Encephalitozoon cuniculi|Rep:
ISOPENTENYL-DIPHOSPHATE-DELTA-ISOMERASE II -
Encephalitozoon cuniculi
Length = 229
Score = 65.3 bits (152), Expect = 1e-09
Identities = 32/72 (44%), Positives = 48/72 (66%)
Frame = +2
Query: 293 DKDICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQRRSSQKVT 472
++D+ LLV++ D IG + H + LHRAFSVFLFN RG++ +QRR+S+K+
Sbjct: 5 NRDV-LLVNDMDEVIGIGKALKTHF---REHLALHRAFSVFLFNSRGELLIQRRASRKLL 60
Query: 473 YPDYYTNACCSH 508
+P +TN+ CSH
Sbjct: 61 FPSRWTNSVCSH 72
>UniRef50_A4ACQ3 Cluster: Isopentenyl-diphosphate delta-isomerase;
n=2; Gammaproteobacteria|Rep: Isopentenyl-diphosphate
delta-isomerase - Congregibacter litoralis KT71
Length = 216
Score = 63.7 bits (148), Expect = 4e-09
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +2
Query: 251 SNKDGLELAQAE-ALDKDICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNK 427
+NK + + +A + + +LVD D +G K H +G +LHRAFS FLF+
Sbjct: 10 TNKASVSVMRAPVSFASEELILVDSDDTVVGYRDKFNTH----EGAGVLHRAFSAFLFDH 65
Query: 428 RGDMFLQRRSSQKVTYPDYYTNACCSH 508
G + + RRS K +P ++TN+CCSH
Sbjct: 66 HGHLLVHRRSEHKPLWPGFWTNSCCSH 92
>UniRef50_Q7N1V4 Cluster: Isopentenyl-diphosphate Delta-isomerase 1;
n=1; Photorhabdus luminescens subsp. laumondii|Rep:
Isopentenyl-diphosphate Delta-isomerase 1 - Photorhabdus
luminescens subsp. laumondii
Length = 176
Score = 62.5 bits (145), Expect = 9e-09
Identities = 27/67 (40%), Positives = 43/67 (64%)
Frame = +2
Query: 308 LLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQRRSSQKVTYPDYY 487
+LVDE DN +G K + H G LHRAFS F+ N + ++++Q+R+ K+ +P Y+
Sbjct: 5 VLVDENDNRVGCINKIDAHLNGDH----LHRAFSCFIINSKNEVYIQQRAQSKLLWPGYW 60
Query: 488 TNACCSH 508
+N+ CSH
Sbjct: 61 SNSYCSH 67
>UniRef50_Q82MJ7 Cluster: Isopentenyl-diphosphate Delta-isomerase;
n=3; Actinomycetales|Rep: Isopentenyl-diphosphate
Delta-isomerase - Streptomyces avermitilis
Length = 197
Score = 61.7 bits (143), Expect = 2e-08
Identities = 32/66 (48%), Positives = 41/66 (62%)
Frame = +2
Query: 311 LVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQRRSSQKVTYPDYYT 490
LVDE IGTA K H+ P G LHRAFSVFLF+++G + LQ+R+ K P ++
Sbjct: 24 LVDENGTTIGTAEKLAAHQ--PPGQ--LHRAFSVFLFDEQGRLLLQQRALGKYHSPGVWS 79
Query: 491 NACCSH 508
N CC H
Sbjct: 80 NTCCGH 85
>UniRef50_Q7QZN2 Cluster: GLP_680_42339_43049; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_680_42339_43049 - Giardia lamblia
ATCC 50803
Length = 236
Score = 61.3 bits (142), Expect = 2e-08
Identities = 34/78 (43%), Positives = 45/78 (57%)
Frame = +2
Query: 275 AQAEALDKDICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQRR 454
A AE D+ +LVDE++ IG A K H G LLHRAFSV + + + LQRR
Sbjct: 8 AHAEPATDDV-ILVDEENKIIGRAPKFVAHTRGG----LLHRAFSVVTVDNQKRVLLQRR 62
Query: 455 SSQKVTYPDYYTNACCSH 508
+S K ++P +N CCSH
Sbjct: 63 ASTKASFPSMLSNTCCSH 80
>UniRef50_Q8FND7 Cluster: Isopentenyl-diphosphate Delta-isomerase;
n=11; Bacteria|Rep: Isopentenyl-diphosphate
Delta-isomerase - Corynebacterium efficiens
Length = 190
Score = 60.1 bits (139), Expect = 5e-08
Identities = 28/72 (38%), Positives = 43/72 (59%)
Frame = +2
Query: 293 DKDICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQRRSSQKVT 472
++++ +L DE+ N IGTA K H D LH AFS ++ N RG++ + RR+ K T
Sbjct: 4 EEELVVLADEEGNAIGTAPKATVHTT----DTPLHFAFSSYILNPRGELLVTRRALSKKT 59
Query: 473 YPDYYTNACCSH 508
+P +TN+ C H
Sbjct: 60 WPGVWTNSMCGH 71
>UniRef50_Q2S1C1 Cluster: Isopentenyl-diphosphate delta-isomerase,
type 1; n=1; Salinibacter ruber DSM 13855|Rep:
Isopentenyl-diphosphate delta-isomerase, type 1 -
Salinibacter ruber (strain DSM 13855)
Length = 209
Score = 58.4 bits (135), Expect = 1e-07
Identities = 30/67 (44%), Positives = 39/67 (58%)
Frame = +2
Query: 308 LLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQRRSSQKVTYPDYY 487
+LV+E D +GTA K H G LHRAFSVF+F+ G + LQRR+ K +
Sbjct: 33 VLVNEDDQSLGTADKLRAHAEG-----WLHRAFSVFVFDPTGRLLLQRRTDDKYHSGGLW 87
Query: 488 TNACCSH 508
+N CCSH
Sbjct: 88 SNTCCSH 94
>UniRef50_Q6J177 Cluster: Putative isopentenyl diphosphate
isomerase; n=1; Edwardsiella ictaluri|Rep: Putative
isopentenyl diphosphate isomerase - Edwardsiella
ictaluri
Length = 119
Score = 57.6 bits (133), Expect = 3e-07
Identities = 29/67 (43%), Positives = 39/67 (58%)
Frame = +2
Query: 308 LLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQRRSSQKVTYPDYY 487
+LVDE D G K H+ G LHRA SV++FN RG++ LQRR++ K +
Sbjct: 34 VLVDEHDAVQGHMEKLAAHRQG-----CLHRALSVYIFNARGELLLQRRAADKYHAGGQW 88
Query: 488 TNACCSH 508
+N CCSH
Sbjct: 89 SNTCCSH 95
>UniRef50_Q9KWD1 Cluster: Isopentenyl-diphosphate Delta-isomerase;
n=1; Agrobacterium rhizogenes|Rep:
Isopentenyl-diphosphate Delta-isomerase - Agrobacterium
rhizogenes
Length = 209
Score = 57.2 bits (132), Expect = 3e-07
Identities = 27/70 (38%), Positives = 40/70 (57%)
Frame = +2
Query: 299 DICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQRRSSQKVTYP 478
++ +L +E GTA K E H D LH AFSV++FN + + RR+S K+T+P
Sbjct: 10 EMVILCNELGEATGTAPKSEIHH----SDTPLHLAFSVYIFNGDNKLLVTRRASDKITWP 65
Query: 479 DYYTNACCSH 508
+N+CC H
Sbjct: 66 GVLSNSCCGH 75
>UniRef50_Q5NWG5 Cluster: Isopentenyl-diphosphate Delta-isomerase 2;
n=2; Azoarcus sp. EbN1|Rep: Isopentenyl-diphosphate
Delta-isomerase 2 - Azoarcus sp. (strain EbN1)
(Aromatoleum aromaticum (strain EbN1))
Length = 189
Score = 57.2 bits (132), Expect = 3e-07
Identities = 29/71 (40%), Positives = 41/71 (57%)
Frame = +2
Query: 296 KDICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQRRSSQKVTY 475
+D +LVDE DN +G A K H+ G LHRA S+F+F+ + LQRR++ K
Sbjct: 2 EDQVILVDEHDNKVGFAGKMAAHQRGA-----LHRAISIFVFDSHSRLMLQRRAAGKYHS 56
Query: 476 PDYYTNACCSH 508
++N CCSH
Sbjct: 57 GGLWSNTCCSH 67
>UniRef50_Q8NN99 Cluster: Isopentenyl-diphosphate Delta-isomerase;
n=3; Corynebacterium glutamicum|Rep:
Isopentenyl-diphosphate Delta-isomerase -
Corynebacterium glutamicum (Brevibacterium flavum)
Length = 189
Score = 56.0 bits (129), Expect = 8e-07
Identities = 27/70 (38%), Positives = 40/70 (57%)
Frame = +2
Query: 299 DICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQRRSSQKVTYP 478
++ +L D + N IGTA K H D LH AFS ++ N RG++ + RR+ K T+P
Sbjct: 6 ELVVLADSEGNPIGTAPKATVHTK----DTPLHFAFSTYILNPRGELLVTRRALSKKTWP 61
Query: 479 DYYTNACCSH 508
+TN+ C H
Sbjct: 62 GVWTNSMCGH 71
>UniRef50_UPI0000E2279B Cluster: PREDICTED: similar to isopentenyl
pyrophosphate isomerase type 2, partial; n=1; Pan
troglodytes|Rep: PREDICTED: similar to isopentenyl
pyrophosphate isomerase type 2, partial - Pan
troglodytes
Length = 152
Score = 55.6 bits (128), Expect = 1e-06
Identities = 23/40 (57%), Positives = 30/40 (75%)
Frame = +2
Query: 389 LLHRAFSVFLFNKRGDMFLQRRSSQKVTYPDYYTNACCSH 508
LLHRAFSV LFN + +Q+RS KVT+P Y+T++C SH
Sbjct: 31 LLHRAFSVVLFNTENRILIQQRSDTKVTFPGYFTDSCSSH 70
>UniRef50_Q11MV0 Cluster: Isopentenyl-diphosphate delta-isomerase,
type 1; n=1; Mesorhizobium sp. BNC1|Rep:
Isopentenyl-diphosphate delta-isomerase, type 1 -
Mesorhizobium sp. (strain BNC1)
Length = 197
Score = 55.6 bits (128), Expect = 1e-06
Identities = 30/72 (41%), Positives = 40/72 (55%)
Frame = +2
Query: 293 DKDICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQRRSSQKVT 472
D+ +LVD D +G+A K H+ + HRA SV +F+ G M LQRRS+ K
Sbjct: 22 DEQNLILVDANDRAVGSAGKLIVHQRN-----MRHRAISVLIFDSAGRMLLQRRSAAKYH 76
Query: 473 YPDYYTNACCSH 508
+TNACCSH
Sbjct: 77 SGGLWTNACCSH 88
>UniRef50_A1WXH5 Cluster: Isopentenyl-diphosphate delta-isomerase,
type 1; n=1; Halorhodospira halophila SL1|Rep:
Isopentenyl-diphosphate delta-isomerase, type 1 -
Halorhodospira halophila (strain DSM 244 / SL1)
(Ectothiorhodospirahalophila (strain DSM 244 / SL1))
Length = 175
Score = 55.6 bits (128), Expect = 1e-06
Identities = 27/67 (40%), Positives = 38/67 (56%)
Frame = +2
Query: 308 LLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQRRSSQKVTYPDYY 487
++VD + +GT K H DG L H AF VF+FN RG++ LQRR+ K + +
Sbjct: 5 VIVDPEGQRVGTEEKIRAHA---DGGTL-HLAFCVFVFNPRGELLLQRRADSKYHFSGLW 60
Query: 488 TNACCSH 508
+N CC H
Sbjct: 61 SNTCCGH 67
>UniRef50_Q6D3F5 Cluster: Isopentenyl-diphosphate Delta-isomerase;
n=1; Pectobacterium atrosepticum|Rep:
Isopentenyl-diphosphate Delta-isomerase - Erwinia
carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 179
Score = 55.2 bits (127), Expect = 1e-06
Identities = 27/67 (40%), Positives = 38/67 (56%)
Frame = +2
Query: 308 LLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQRRSSQKVTYPDYY 487
+LVDE D G K+E H G LHRA +V++FN R + LQ+R+ +K +
Sbjct: 7 VLVDENDKPTGVMEKQEAHVKGE-----LHRAITVYIFNSRQQLLLQQRAEEKYHSGGLW 61
Query: 488 TNACCSH 508
+N CCSH
Sbjct: 62 SNTCCSH 68
>UniRef50_A0CI91 Cluster: Chromosome undetermined scaffold_19, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_19,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 226
Score = 53.2 bits (122), Expect = 5e-06
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = +2
Query: 395 HRAFSVFLFNKRGDMFLQRRSSQKVTYPDYYTNACCSH 508
HRAFS+FLF+K + LQ+RS K T+P +TN CCSH
Sbjct: 50 HRAFSLFLFDKNYKLLLQQRSDAKKTFPLLWTNTCCSH 87
>UniRef50_A7DRD6 Cluster: Isopentenyl-diphosphate delta-isomerase,
type 1; n=1; Candidatus Nitrosopumilus maritimus
SCM1|Rep: Isopentenyl-diphosphate delta-isomerase, type
1 - Candidatus Nitrosopumilus maritimus SCM1
Length = 216
Score = 53.2 bits (122), Expect = 5e-06
Identities = 28/71 (39%), Positives = 41/71 (57%)
Frame = +2
Query: 296 KDICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQRRSSQKVTY 475
++ +LVDE DN IG K +CH P+G LHRAF+ LF+ G + L RR+ +K+ +
Sbjct: 3 EEFVILVDENDNPIGKEEKVKCHL--PNGK--LHRAFTALLFDDSGRLVLTRRAKEKMLW 58
Query: 476 PDYYTNACCSH 508
P + SH
Sbjct: 59 PGDWDGTFASH 69
>UniRef50_UPI00015535B1 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 118
Score = 52.8 bits (121), Expect = 7e-06
Identities = 20/40 (50%), Positives = 31/40 (77%)
Frame = +2
Query: 389 LLHRAFSVFLFNKRGDMFLQRRSSQKVTYPDYYTNACCSH 508
LLHRAFSV LFN + ++ +Q+R+ K T+P ++T++C SH
Sbjct: 4 LLHRAFSVVLFNMKNELLVQQRADAKYTFPGHFTDSCSSH 43
>UniRef50_Q83DT5 Cluster: Diphosphomevalonate decarboxylase; n=4;
Coxiella burnetii|Rep: Diphosphomevalonate decarboxylase
- Coxiella burnetii
Length = 503
Score = 52.8 bits (121), Expect = 7e-06
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Frame = +2
Query: 308 LLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGD---MFLQRRSSQKVTYP 478
+LVDE D +G K + H+ G LHRAFSVF+F+++ + + LQ+R +K
Sbjct: 336 VLVDENDRRLGIEEKIKAHREGK-----LHRAFSVFIFSRKNNEWQLLLQQRHPEKYHSG 390
Query: 479 DYYTNACCSH 508
+TN CCSH
Sbjct: 391 GLWTNTCCSH 400
>UniRef50_A0RY18 Cluster: Isopentenyl-diphosphate delta-isomerase;
n=1; Cenarchaeum symbiosum|Rep: Isopentenyl-diphosphate
delta-isomerase - Cenarchaeum symbiosum
Length = 210
Score = 52.4 bits (120), Expect = 9e-06
Identities = 28/70 (40%), Positives = 42/70 (60%)
Frame = +2
Query: 299 DICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQRRSSQKVTYP 478
++ +LVD+ D+ +G A K CH P G LHRAF+V LF+ +G + L RRS+ K+ +P
Sbjct: 2 EMLVLVDKDDSPLGLAEKVSCHL--PQGR--LHRAFTVLLFDPKGRLLLARRSAGKMLWP 57
Query: 479 DYYTNACCSH 508
+ SH
Sbjct: 58 GDWDGTVASH 67
>UniRef50_Q5YYB6 Cluster: Isopentenyl-diphosphate Delta-isomerase;
n=3; Actinomycetales|Rep: Isopentenyl-diphosphate
Delta-isomerase - Nocardia farcinica
Length = 175
Score = 52.0 bits (119), Expect = 1e-05
Identities = 27/66 (40%), Positives = 36/66 (54%)
Frame = +2
Query: 311 LVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQRRSSQKVTYPDYYT 490
LVDE +G E H+ G LHRAFSV LF+ G + LQ+R++ K +P +
Sbjct: 5 LVDEAGRAVGACPVAEAHR--DPGK--LHRAFSVLLFDTAGRVLLQQRAAVKTRFPLLWA 60
Query: 491 NACCSH 508
N CC H
Sbjct: 61 NTCCGH 66
>UniRef50_Q8A0P9 Cluster: Putative NTP pyrophosphohydrolase; n=8;
Bacteroidales|Rep: Putative NTP pyrophosphohydrolase -
Bacteroides thetaiotaomicron
Length = 180
Score = 51.2 bits (117), Expect = 2e-05
Identities = 25/66 (37%), Positives = 35/66 (53%)
Frame = +2
Query: 311 LVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQRRSSQKVTYPDYYT 490
+VDE+ N G AT+ ECH G LLH + +FN +GD++LQ+R K P +
Sbjct: 12 IVDEQGNITGAATRGECHS----GSKLLHPVIHLHVFNSKGDLYLQKRPEWKDIQPGKWD 67
Query: 491 NACCSH 508
A H
Sbjct: 68 TAVGGH 73
>UniRef50_P72002 Cluster: Isopentenyl-diphosphate Delta-isomerase;
n=10; Actinomycetales|Rep: Isopentenyl-diphosphate
Delta-isomerase - Mycobacterium tuberculosis
Length = 203
Score = 50.4 bits (115), Expect = 4e-05
Identities = 23/67 (34%), Positives = 39/67 (58%)
Frame = +2
Query: 308 LLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQRRSSQKVTYPDYY 487
+L++++ + G A K H GD LH AFS ++F+ + + RR++ K T+P +
Sbjct: 15 VLLNDRGDATGVADKATVHT----GDTPLHLAFSSYVFDLHDQLLITRRAATKRTWPAVW 70
Query: 488 TNACCSH 508
TN+CC H
Sbjct: 71 TNSCCGH 77
>UniRef50_Q2J5A6 Cluster: Isopentenyl-diphosphate delta-isomerase,
type 1; n=5; Actinomycetales|Rep:
Isopentenyl-diphosphate delta-isomerase, type 1 -
Frankia sp. (strain CcI3)
Length = 219
Score = 50.0 bits (114), Expect = 5e-05
Identities = 26/70 (37%), Positives = 39/70 (55%)
Frame = +2
Query: 299 DICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQRRSSQKVTYP 478
D +L+D + GTA + H + D LH AFS +LF+ G + + RR+ K T+P
Sbjct: 34 DEVVLLDAERRPCGTAPRIAVHGL----DTPLHLAFSSYLFDPSGRLLVTRRALDKRTWP 89
Query: 479 DYYTNACCSH 508
+TN+CC H
Sbjct: 90 GVWTNSCCGH 99
>UniRef50_Q6A5Z1 Cluster: Isopentenyl-diphosphate Delta-isomerase;
n=1; Propionibacterium acnes|Rep:
Isopentenyl-diphosphate Delta-isomerase -
Propionibacterium acnes
Length = 199
Score = 48.0 bits (109), Expect = 2e-04
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +2
Query: 251 SNKDGL-ELAQAEALDKDICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNK 427
S+ DG E A++ D +L+D+ N IGTA + H H AFS + +
Sbjct: 2 SHHDGENEGTSADSGYDDFVILLDDDGNHIGTAPRATVHSQHTPR----HLAFSCHVLDV 57
Query: 428 RGDMFLQRRSSQKVTYPDYYTNACCSH 508
G + + RR+ KV +P +TN CC H
Sbjct: 58 GGRVLVTRRALTKVAWPGVWTNTCCGH 84
>UniRef50_Q83MJ9 Cluster: Isopentenyl-diphosphate Delta-isomerase;
n=22; Enterobacteriaceae|Rep: Isopentenyl-diphosphate
Delta-isomerase - Shigella flexneri
Length = 182
Score = 47.6 bits (108), Expect = 3e-04
Identities = 23/57 (40%), Positives = 31/57 (54%)
Frame = +2
Query: 338 GTATKRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQRRSSQKVTYPDYYTNACCSH 508
GT K H D LLH AFS +LFN +G + + RR+ K +P +TN+ C H
Sbjct: 17 GTLEKYAAHTA----DTLLHLAFSSWLFNAKGQLLVTRRALSKKAWPGVWTNSVCGH 69
>UniRef50_Q1JYN2 Cluster: NUDIX hydrolase; n=2;
Desulfuromonadales|Rep: NUDIX hydrolase - Desulfuromonas
acetoxidans DSM 684
Length = 172
Score = 47.2 bits (107), Expect = 4e-04
Identities = 26/70 (37%), Positives = 34/70 (48%)
Frame = +2
Query: 299 DICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQRRSSQKVTYP 478
D +VD D IG + ECH PD L+HR V +FN GD+ LQ+RS K P
Sbjct: 6 DFFEIVDSDDQVIGLRPRNECHG-NPD---LVHRVSHVLVFNSSGDLLLQKRSELKDVQP 61
Query: 479 DYYTNACCSH 508
+ + H
Sbjct: 62 GKWDTSVGGH 71
>UniRef50_A6CD79 Cluster: Putative uncharacterized protein; n=1;
Planctomyces maris DSM 8797|Rep: Putative
uncharacterized protein - Planctomyces maris DSM 8797
Length = 168
Score = 46.8 bits (106), Expect = 5e-04
Identities = 25/66 (37%), Positives = 36/66 (54%)
Frame = +2
Query: 311 LVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQRRSSQKVTYPDYYT 490
+VDE+D + + H LLHRA +VF+FN +G + LQ RS+ K YP YT
Sbjct: 9 VVDEQDQILEQLPRSVVH-----ARKLLHRAANVFVFNSQGKLLLQFRSATKDEYPHCYT 63
Query: 491 NACCSH 508
++ H
Sbjct: 64 SSASGH 69
>UniRef50_A7CUZ5 Cluster: NUDIX hydrolase; n=1; Opitutaceae
bacterium TAV2|Rep: NUDIX hydrolase - Opitutaceae
bacterium TAV2
Length = 214
Score = 45.2 bits (102), Expect = 0.001
Identities = 26/76 (34%), Positives = 42/76 (55%)
Frame = +2
Query: 281 AEALDKDICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQRRSS 460
A+ LD ++ +VDE D + T+ E H+ LLHR+ V +F++ +FLQ+RS
Sbjct: 44 AQRLD-ELFDVVDENDRVLRQETRAEVHR-----QKLLHRSIHVLVFDRACRVFLQKRSL 97
Query: 461 QKVTYPDYYTNACCSH 508
K T P + ++C H
Sbjct: 98 AKDTAPGCWASSCSGH 113
>UniRef50_Q9HUW9 Cluster: Uncharacterized Nudix hydrolase PA4841;
n=17; Pseudomonadaceae|Rep: Uncharacterized Nudix
hydrolase PA4841 - Pseudomonas aeruginosa
Length = 169
Score = 44.0 bits (99), Expect = 0.003
Identities = 23/72 (31%), Positives = 38/72 (52%)
Frame = +2
Query: 272 LAQAEALDKDICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQR 451
+A A D ++ VDE+D +G+ + E + G L+ R + LFN G++ +QR
Sbjct: 1 MAHRAASDAELIAWVDEQDRPLGSLPRAELRERG-----LIGRGTFILLFNSAGELCVQR 55
Query: 452 RSSQKVTYPDYY 487
R+ K YP Y+
Sbjct: 56 RTLSKAVYPGYW 67
>UniRef50_Q28W27 Cluster: Isopentenyl-diphosphate delta-isomerase;
n=2; Alphaproteobacteria|Rep: Isopentenyl-diphosphate
delta-isomerase - Jannaschia sp. (strain CCS1)
Length = 176
Score = 40.7 bits (91), Expect = 0.031
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = +2
Query: 389 LLHRAFSVFLFNKRGDMFLQRRSSQKVTYPDYYTNACCSH 508
L H+A SVF+ + GD+ LQRR+ K P + N CC+H
Sbjct: 26 LRHKAISVFIL-RDGDVLLQRRAMGKYHTPGLWANTCCTH 64
>UniRef50_Q0SK61 Cluster: Isopentenyl-diphosphate delta-isomerase;
n=1; Rhodococcus sp. RHA1|Rep: Isopentenyl-diphosphate
delta-isomerase - Rhodococcus sp. (strain RHA1)
Length = 139
Score = 40.7 bits (91), Expect = 0.031
Identities = 21/66 (31%), Positives = 32/66 (48%)
Frame = +2
Query: 311 LVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQRRSSQKVTYPDYYT 490
L+DE +GT + H LH AFS ++ + G + RR+ K T+P +T
Sbjct: 7 LLDEAGPQVGTVAEASVHTSATP----LHLAFSAYVIDPEGQGLVGRRARWKSTWPGVWT 62
Query: 491 NACCSH 508
N+C H
Sbjct: 63 NSCSGH 68
>UniRef50_A1AU24 Cluster: NUDIX hydrolase; n=1; Pelobacter
propionicus DSM 2379|Rep: NUDIX hydrolase - Pelobacter
propionicus (strain DSM 2379)
Length = 178
Score = 40.3 bits (90), Expect = 0.041
Identities = 22/66 (33%), Positives = 30/66 (45%)
Frame = +2
Query: 311 LVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQRRSSQKVTYPDYYT 490
+VDE + AT+ CH DG LLH V +FN G + LQ+R K P +
Sbjct: 8 IVDENGTALDRATRARCH----DGSKLLHPVVHVHVFNSGGKLLLQKRKLTKDIQPGKWD 63
Query: 491 NACCSH 508
+ H
Sbjct: 64 TSVGGH 69
>UniRef50_Q6LUX5 Cluster: Isopentenyl-diphosphate Delta-isomerase;
n=6; Vibrionaceae|Rep: Isopentenyl-diphosphate
Delta-isomerase - Photobacterium profundum
(Photobacterium sp. (strain SS9))
Length = 180
Score = 40.3 bits (90), Expect = 0.041
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +2
Query: 308 LLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNK--RGDMFL-QRRSSQKVTYP 478
+LVD++ +G K + H+ G LH AFSV L+ + +G FL Q+R+ K
Sbjct: 8 VLVDQQGRALGLQEKMQAHRDGA-----LHLAFSVLLYRETTQGIEFLMQQRALGKYHSG 62
Query: 479 DYYTNACCSH 508
+TN CCSH
Sbjct: 63 GLWTNTCCSH 72
>UniRef50_UPI0000E0E5DB Cluster: hypothetical isopentenyldiphosphate
isomerase; n=1; alpha proteobacterium HTCC2255|Rep:
hypothetical isopentenyldiphosphate isomerase - alpha
proteobacterium HTCC2255
Length = 196
Score = 39.9 bits (89), Expect = 0.054
Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Frame = +2
Query: 260 DGLELAQAEALDKDICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFN-KRG- 433
D + + D + LL D N+ T K + H DGD LH AFSV L +G
Sbjct: 4 DSNSFKEHRSTDYNEVLLCDINGNYKSTKDKLQAHL---DGD--LHIAFSVQLVRPSKGK 58
Query: 434 ----DMFLQRRSSQKVTYPDYYTNACCSH 508
++ LQRR+ K +TN CCSH
Sbjct: 59 QNGIELLLQRRAEGKYHSEGLWTNTCCSH 87
>UniRef50_Q08JB5 Cluster: Putative uncharacterized protein orf153;
n=1; Escherichia coli|Rep: Putative uncharacterized
protein orf153 - Escherichia coli
Length = 179
Score = 39.9 bits (89), Expect = 0.054
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +2
Query: 308 LLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQRRSSQKVTYPDYY 487
+L+ D G A K HK +LHRA V+++N G++FLQ+++ K +
Sbjct: 5 ILIGHNDCETGIAEKLYTHK-----KCILHRAVYVYIYNSNGELFLQKKALGKYYSLVLW 59
Query: 488 TNACCSH 508
+N C+H
Sbjct: 60 SNISCTH 66
>UniRef50_A3I6L2 Cluster: Putative uncharacterized protein; n=1;
Bacillus sp. B14905|Rep: Putative uncharacterized
protein - Bacillus sp. B14905
Length = 207
Score = 38.3 bits (85), Expect = 0.16
Identities = 24/73 (32%), Positives = 37/73 (50%)
Frame = +2
Query: 290 LDKDICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQRRSSQKV 469
++++I + +E+ IGTAT+ E H+ G L H F +L N+ ++ Q RSSQK
Sbjct: 1 MEQEIVKVFNEQHEEIGTATRSEVHEKG-----LWHETFHCWLVNE-DYIYFQVRSSQKK 54
Query: 470 TYPDYYTNACCSH 508
YP H
Sbjct: 55 DYPGLLDITAAGH 67
>UniRef50_Q9HP40 Cluster: Isopentenyl-diphosphate Delta-isomerase;
n=13; Halobacteriaceae|Rep: Isopentenyl-diphosphate
Delta-isomerase - Halobacterium salinarium
(Halobacterium halobium)
Length = 213
Score = 38.3 bits (85), Expect = 0.16
Identities = 25/86 (29%), Positives = 41/86 (47%)
Frame = +2
Query: 251 SNKDGLELAQAEALDKDICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKR 430
S K E AE +D+ + V D G A + + H GD + HRAF+ LF++
Sbjct: 15 SGKTDREDETAENATQDV-IAVTPDDERTGLANRLDAHT----GDGVRHRAFTCLLFDED 69
Query: 431 GDMFLQRRSSQKVTYPDYYTNACCSH 508
G + L +R+ +K + ++ SH
Sbjct: 70 GRVLLAQRADRKRLWDTHWDGTVASH 95
>UniRef50_Q2UHM3 Cluster: Isopentenyl pyrophosphate:dimethylallyl
pyrophosphate isomerase; n=1; Aspergillus oryzae|Rep:
Isopentenyl pyrophosphate:dimethylallyl pyrophosphate
isomerase - Aspergillus oryzae
Length = 232
Score = 37.9 bits (84), Expect = 0.22
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +2
Query: 260 DGLELAQAEALDKDICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFL 418
+G + Q +D ++C+++D D I A+KR CH + LLHRAFS +
Sbjct: 45 EGYDEEQVRLMD-EVCIVLDVDDEPISRASKRVCHLMTNIDRGLLHRAFSCLI 96
>UniRef50_Q0TXR0 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 451
Score = 37.1 bits (82), Expect = 0.38
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = -2
Query: 635 RFV*AAVHDVPVRANCLVDSQFMVHPTSGCRMISSGFSSMXSD 507
RFV + D+P+R CL+ S+ +HPT R S+G SS+ S+
Sbjct: 281 RFV-VLLEDLPIRLVCLLGSRLCIHPTIFARHYSTGDSSLISE 322
>UniRef50_A6VUC2 Cluster: NUDIX hydrolase precursor; n=2;
Marinomonas|Rep: NUDIX hydrolase precursor - Marinomonas
sp. MWYL1
Length = 178
Score = 35.9 bits (79), Expect = 0.88
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +2
Query: 299 DICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQRRSSQKVTYP 478
++ +LVD+ + IG +R + G D HR + +FN G++ +Q+R+ K P
Sbjct: 6 EVIILVDKNNKIIGDVPRRLMN-FGRD----YHRVTYILVFNPAGNLLIQKRTDDKAFCP 60
Query: 479 DYY 487
+Y
Sbjct: 61 SFY 63
>UniRef50_Q73N41 Cluster: Conserved domain protein; n=1; Treponema
denticola|Rep: Conserved domain protein - Treponema
denticola
Length = 578
Score = 35.5 bits (78), Expect = 1.2
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Frame = +2
Query: 149 HTYENVGQKANKITVEHPKSREKIFGFRTCETCYSNKDGLELAQAEALDKDICLLVDEKD 328
+T + G+ K +++ K E +FG E +++ L +A LD I L+ + +D
Sbjct: 218 NTLKKFGKLWLKNFLKNIKQTEGLFGINKIENIFASCPALIIAAGPGLDDTINLVKENED 277
Query: 329 NFIGTATK---RECHKVGPDGDVLL 394
FI A R CH+ G D +L
Sbjct: 278 KFIIIAADTAVRACHRHGLKPDFIL 302
>UniRef50_Q5LWT6 Cluster: Isopentenyl-diphosphate Delta-isomerase;
n=20; Proteobacteria|Rep: Isopentenyl-diphosphate
Delta-isomerase - Silicibacter pomeroyi
Length = 180
Score = 35.5 bits (78), Expect = 1.2
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = +2
Query: 326 DNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQRRSSQKVTYPDYYTNACCS 505
D+ + K E H+ G L H+A SVF D+ +QRR+ K P + N CC+
Sbjct: 10 DDRLVPVDKLEAHEKG-----LKHKAVSVFAVRDM-DILIQRRALGKYHTPGLWANTCCT 63
Query: 506 H 508
H
Sbjct: 64 H 64
>UniRef50_A6PL45 Cluster: NUDIX hydrolase; n=1; Victivallis vadensis
ATCC BAA-548|Rep: NUDIX hydrolase - Victivallis vadensis
ATCC BAA-548
Length = 168
Score = 35.1 bits (77), Expect = 1.5
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +2
Query: 311 LVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRGD-MFLQRRSSQKVTYPDYY 487
+ D N IG A +RECH LLH V +F+ G + LQ+RS K P +
Sbjct: 7 IYDSAGNRIGVAPRRECH----GNPSLLHHTSHVVVFHPDGKRILLQKRSMSKDIQPGKW 62
Query: 488 TNACCSH 508
A H
Sbjct: 63 DTAVGGH 69
>UniRef50_Q03T85 Cluster: NUDIX family hydrolase; n=1; Lactobacillus
brevis ATCC 367|Rep: NUDIX family hydrolase -
Lactobacillus brevis (strain ATCC 367 / JCM 1170)
Length = 172
Score = 34.7 bits (76), Expect = 2.0
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2
Query: 353 RECHKVGPDGDVLLHRAFSVFLFNKRGDMFLQRRSSQKVTYPDYY 487
R+ H+ G+ H + F+FN G + LQ+R + K+ +P+Y+
Sbjct: 23 RQRHETLASGE--FHLVVNAFIFNTAGSVLLQQRVADKINFPNYW 65
>UniRef50_A3DFU0 Cluster: NUDIX hydrolase; n=1; Clostridium
thermocellum ATCC 27405|Rep: NUDIX hydrolase -
Clostridium thermocellum (strain ATCC 27405 / DSM 1237)
Length = 189
Score = 34.3 bits (75), Expect = 2.7
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Frame = +2
Query: 299 DICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFN-KRG--DMFLQRRSSQKV 469
+I +VDE N G +R+ K +G +LHR V++ K+G + LQ+RS K
Sbjct: 2 EILDIVDEHGNPTGKTVERQ--KAHEEG--ILHRTSHVWILREKQGKIQVLLQKRSGSKE 57
Query: 470 TYPDYYTNACCSH 508
+YP+ Y + H
Sbjct: 58 SYPECYDISSAGH 70
>UniRef50_A7HJY4 Cluster: Citrate transporter; n=1; Fervidobacterium
nodosum Rt17-B1|Rep: Citrate transporter -
Fervidobacterium nodosum Rt17-B1
Length = 408
Score = 33.9 bits (74), Expect = 3.5
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = -3
Query: 277 G*FQTILIRVAGFTGSEAKNLFSTLRVLHSDLVSFLTNIFVCMNFTELHFYIT 119
G FQ I I+ TGS K LF ++ + + + SF+ N+ + F + F IT
Sbjct: 73 GIFQYIAIKTLKLTGSNLKKLFFSMTFIVALISSFIDNVTTILIFVPVTFAIT 125
>UniRef50_Q1QTN6 Cluster: NUDIX hydrolase; n=1; Chromohalobacter
salexigens DSM 3043|Rep: NUDIX hydrolase -
Chromohalobacter salexigens (strain DSM 3043 / ATCC
BAA-138 / NCIMB13768)
Length = 185
Score = 33.5 bits (73), Expect = 4.7
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +2
Query: 395 HRAFSVFLFNKRGDMFLQRRSSQKVTYPDYY 487
HRA VF+ N RG++ +QRR+ K +P Y+
Sbjct: 48 HRATYVFVRNGRGELCVQRRTLTKEVFPGYH 78
>UniRef50_A7AM45 Cluster: Hydrolase, NUDIX family protein; n=1;
Babesia bovis|Rep: Hydrolase, NUDIX family protein -
Babesia bovis
Length = 204
Score = 33.5 bits (73), Expect = 4.7
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Frame = +2
Query: 260 DGLELAQAEALDK--DICLLVDEKDNFIGTATKRECHKVGPDGDVLLHRAFSVFLFNKRG 433
D ++ A+ +++ + ++ ++VD+ DN IGT T++E + HRA S + +
Sbjct: 7 DTIDKARLDSIPQSTEVVVMVDKDDNEIGTCTRKEMRQFNK-----WHRATSTIILSNID 61
Query: 434 D--MFLQRRSSQKVTYPDYY 487
D ++ Q R K P YY
Sbjct: 62 DPVIYYQVRDEHKDYCPGYY 81
>UniRef50_Q4SMK5 Cluster: Chromosome 18 SCAF14547, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 18
SCAF14547, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 270
Score = 33.1 bits (72), Expect = 6.2
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 188 TVEHPKSREKIFGFRTCETCYSNKDGLELAQAEALDKDICLLVDE 322
+ +H +FG CE C++ K GLELA+ +D D L+DE
Sbjct: 100 SADHATDSSPLFGL-DCEMCWTEK-GLELARVSLVDSDGRCLLDE 142
>UniRef50_A7RGX4 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 466
Score = 32.7 bits (71), Expect = 8.2
Identities = 20/44 (45%), Positives = 27/44 (61%)
Frame = +3
Query: 195 STLRVEKRFLASEPVKPATLIRMVWN*PRQKL*IKIFAC*LMKR 326
S ++VE+ LAS PV+ AT MV N K I++ +C LMKR
Sbjct: 179 SEVKVERTCLASLPVRTATTTTMVQNQDEPKT-IELASCDLMKR 221
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 657,801,335
Number of Sequences: 1657284
Number of extensions: 13101309
Number of successful extensions: 26775
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 26069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26739
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50826451017
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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