Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0158
         (406 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P...    25   1.4  
AY176048-1|AAO19579.1|  521|Anopheles gambiae cytochrome P450 CY...    23   5.6  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    22   7.4  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    22   7.4  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    22   7.4  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    22   7.4  

>AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P450
           reductase protein.
          Length = 679

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +1

Query: 292 FSEMGSRERSFQGTEPLPHDPTNDLEMVERKGKL 393
           F   GS+ R ++  + L   P ND ++VER G+L
Sbjct: 308 FDIEGSKMR-YEAGDHLAMYPVNDRDLVERLGRL 340


>AY176048-1|AAO19579.1|  521|Anopheles gambiae cytochrome P450
           CYP12F4 protein.
          Length = 521

 Score = 22.6 bits (46), Expect = 5.6
 Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
 Frame = -1

Query: 382 FARP---FPSRW*GHGAAAPCPESSSHVIP 302
           F RP    P RW    AAA CP S+  V P
Sbjct: 427 FTRPSEFMPERWLSGEAAAGCP-SAKEVHP 455


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 22.2 bits (45), Expect = 7.4
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 337 APCPESSSHVIPSPKR 290
           AP P++ +H+ P+ KR
Sbjct: 412 APTPKAKTHICPTCKR 427


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 22.2 bits (45), Expect = 7.4
 Identities = 9/22 (40%), Positives = 9/22 (40%)
 Frame = +2

Query: 281 GKSSFRRWDHVRGAFRARSRCP 346
           GK    RW H       RS CP
Sbjct: 533 GKEVTNRWHHFHSHTPQRSLCP 554


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 22.2 bits (45), Expect = 7.4
 Identities = 9/22 (40%), Positives = 9/22 (40%)
 Frame = +2

Query: 281 GKSSFRRWDHVRGAFRARSRCP 346
           GK    RW H       RS CP
Sbjct: 509 GKEVTNRWHHFHSHTPQRSLCP 530


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 22.2 bits (45), Expect = 7.4
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 405  IGYGQLTFSLDHFQ 364
            IG+  LT +LDH++
Sbjct: 1633 IGFNMLTMTLDHYK 1646


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 372,502
Number of Sequences: 2352
Number of extensions: 5744
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32494788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)