Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0158
         (406 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF454349-1|AAL91723.1|  689|Drosophila melanogaster unconvention...    27   7.2  
AF454348-1|AAL91722.1| 1313|Drosophila melanogaster unconvention...    27   7.2  
AF405293-1|AAK97502.3| 1232|Drosophila melanogaster unconvention...    27   7.2  
AE014134-1526|AAF52683.2| 1232|Drosophila melanogaster CG10595-P...    27   7.2  
AE014134-1525|AAS64742.1|  690|Drosophila melanogaster CG10595-P...    27   7.2  
AE014134-1524|AAS64741.1| 1317|Drosophila melanogaster CG10595-P...    27   7.2  

>AF454349-1|AAL91723.1|  689|Drosophila melanogaster unconventional
           myosin 29D shortisoform protein.
          Length = 689

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = -2

Query: 402 GYGQLTFSLDHFQVVGRVMGQRLRALKAPLT*SHLRKELLPYKT 271
           G+GQ T +L H   +G ++GQ   +  AP+  +      LP +T
Sbjct: 233 GHGQSTGTLPHMSGMGSILGQNSHS-HAPVNNNSNNSNTLPMRT 275


>AF454348-1|AAL91722.1| 1313|Drosophila melanogaster unconventional
           myosin 29D protein.
          Length = 1313

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = -2

Query: 402 GYGQLTFSLDHFQVVGRVMGQRLRALKAPLT*SHLRKELLPYKT 271
           G+GQ T +L H   +G ++GQ   +  AP+  +      LP +T
Sbjct: 233 GHGQSTGTLPHMSGMGSILGQNSHS-HAPVNNNSNNSNTLPMRT 275


>AF405293-1|AAK97502.3| 1232|Drosophila melanogaster unconventional
           myosin protein.
          Length = 1232

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = -2

Query: 402 GYGQLTFSLDHFQVVGRVMGQRLRALKAPLT*SHLRKELLPYKT 271
           G+GQ T +L H   +G ++GQ   +  AP+  +      LP +T
Sbjct: 169 GHGQSTGTLPHMSGMGSILGQNSHS-HAPVNNNSNNSNTLPMRT 211


>AE014134-1526|AAF52683.2| 1232|Drosophila melanogaster CG10595-PA,
           isoform A protein.
          Length = 1232

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = -2

Query: 402 GYGQLTFSLDHFQVVGRVMGQRLRALKAPLT*SHLRKELLPYKT 271
           G+GQ T +L H   +G ++GQ   +  AP+  +      LP +T
Sbjct: 169 GHGQSTGTLPHMSGMGSILGQNSHS-HAPVNNNSNNSNTLPMRT 211


>AE014134-1525|AAS64742.1|  690|Drosophila melanogaster CG10595-PC,
           isoform C protein.
          Length = 690

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = -2

Query: 402 GYGQLTFSLDHFQVVGRVMGQRLRALKAPLT*SHLRKELLPYKT 271
           G+GQ T +L H   +G ++GQ   +  AP+  +      LP +T
Sbjct: 233 GHGQSTGTLPHMSGMGSILGQNSHS-HAPVNNNSNNSNTLPMRT 275


>AE014134-1524|AAS64741.1| 1317|Drosophila melanogaster CG10595-PB,
           isoform B protein.
          Length = 1317

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = -2

Query: 402 GYGQLTFSLDHFQVVGRVMGQRLRALKAPLT*SHLRKELLPYKT 271
           G+GQ T +L H   +G ++GQ   +  AP+  +      LP +T
Sbjct: 233 GHGQSTGTLPHMSGMGSILGQNSHS-HAPVNNNSNNSNTLPMRT 275


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,695,287
Number of Sequences: 53049
Number of extensions: 259151
Number of successful extensions: 689
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 689
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1191504915
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)