Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0157
         (467 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q22TU6 Cluster: Putative uncharacterized protein; n=1; ...    36   0.44 
UniRef50_Q22TU8 Cluster: Putative uncharacterized protein; n=4; ...    33   3.1  
UniRef50_A5FEL8 Cluster: TonB-dependent receptor, plug precursor...    33   4.1  
UniRef50_Q97UM1 Cluster: Putative uncharacterized protein; n=2; ...    32   7.2  

>UniRef50_Q22TU6 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1298

 Score = 35.9 bits (79), Expect = 0.44
 Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
 Frame = -1

Query: 422  NNLRYKVNVIRYINSVKSKSFRK---KISQLTRLG*VKVNGYFGISDIFATLQQSHLKF- 255
            NNL+  +++    +S KS   R+    I++  ++  +K+    GIS I  TL  +   F 
Sbjct: 757  NNLQQNIDIQSISSSSKSFLIRQVFENINKRKQMRYLKIINILGISSILVTLALTLSGFF 816

Query: 254  KFGENIS**KKNFNYLNGVNLIEVQLKTS 168
             F  +++  ++NF Y+N + LI VQ+  S
Sbjct: 817  TFFTSLASQRENFKYINWIYLINVQISYS 845


>UniRef50_Q22TU8 Cluster: Putative uncharacterized protein; n=4;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1388

 Score = 33.1 bits (72), Expect = 3.1
 Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
 Frame = -1

Query: 380  SVKSKSFRKKISQLTRLG*VKVNGYFGISDIFATLQQSHLKF-KFGENIS**KKNFNYLN 204
            SV+++   + I + +++  +K+   FGI  + A L  + L F  F  ++   ++NF Y+N
Sbjct: 882  SVQTRHVFENIHKKSQMRYLKIINAFGILSVLAILSLTLLAFFNFLTSLVSQRENFKYIN 941

Query: 203  GVNLIEVQLKTS 168
             + +I VQ+  S
Sbjct: 942  WIYMINVQISYS 953


>UniRef50_A5FEL8 Cluster: TonB-dependent receptor, plug precursor;
           n=1; Flavobacterium johnsoniae UW101|Rep: TonB-dependent
           receptor, plug precursor - Flavobacterium johnsoniae
           UW101
          Length = 1119

 Score = 32.7 bits (71), Expect = 4.1
 Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
 Frame = -1

Query: 404 VNVIRYINSVKSKSFRKKISQLTRLG*VKVNGYFGI-SDIFATLQQSHLKFKFGENIS** 228
           VN I+Y+N  +    R +  + T  G V V+ Y GI +D F  L +S +  K+  N+S  
Sbjct: 379 VNQIKYLNGEQYTELRNEFMKNTTAGYVPVS-YNGINTDWFNILNRSGVYNKYNFNVSGS 437

Query: 227 KKNFNYLNGVNLIEV 183
              F+Y   V+  ++
Sbjct: 438 TSKFSYRTNVSYTKI 452


>UniRef50_Q97UM1 Cluster: Putative uncharacterized protein; n=2;
           Sulfolobus|Rep: Putative uncharacterized protein -
           Sulfolobus solfataricus
          Length = 320

 Score = 31.9 bits (69), Expect = 7.2
 Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
 Frame = +2

Query: 44  ELTFFILFYCHDVEG*KAVFVYVTFIFVIKDAFYLVS-SINNSMFLIELQ 190
           +L + + F+  ++ G   +   + F+++IKD FYL S  +  SM  I +Q
Sbjct: 264 DLAYILRFFYFEISGIFWIVAVIYFLYLIKDNFYLTSIKLGLSMRFIRMQ 313


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 387,571,540
Number of Sequences: 1657284
Number of extensions: 6669710
Number of successful extensions: 11066
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11063
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 25610991215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)