Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0156
(333 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0538 + 29841801-29842280,29842559-29842930,29843013-29843309 34 0.024
05_03_0396 - 13477465-13477761,13477970-13478341,13478414-13478887 34 0.032
05_07_0283 - 28937027-28937110,28937211-28937549,28937641-289377... 33 0.074
01_05_0410 + 21914995-21915168,21915268-21915353,21915446-219156... 32 0.13
01_06_0447 + 29452194-29452361,29453232-29453317,29453403-294536... 31 0.17
02_02_0134 + 7082462-7082627,7084199-7084325,7084404-7084611,708... 31 0.30
11_06_0633 + 25681756-25682061,25682961-25683329,25683419-25683733 30 0.39
07_03_0117 + 13589997-13590998 29 0.69
01_01_1139 - 9024609-9024708,9024832-9024910,9025083-9025252,902... 29 0.91
07_03_0493 + 18747427-18748356,18748594-18748697,18749586-187497... 29 1.2
03_05_0791 + 27736978-27737217,27737648-27739191,27739512-277397... 28 2.1
05_04_0386 + 20822376-20822982,20823715-20824244,20824315-20825127 27 2.8
01_06_0063 + 26100877-26101144,26101683-26101990,26102133-261028... 27 2.8
05_06_0233 + 26599068-26599466,26601214-26601829,26601871-266019... 27 4.9
05_01_0445 + 3547176-3547577,3548625-3549557,3550246-3550524,355... 27 4.9
02_05_0243 - 27124559-27124864,27126922-27126990,27127741-271279... 27 4.9
04_03_0818 + 20014685-20014687,20014792-20014831,20014988-200150... 26 6.4
03_06_0763 + 36081546-36081669,36081755-36082170,36082280-360823... 26 6.4
02_01_0503 + 3669758-3670059,3670351-3670870 26 6.4
10_01_0097 - 1171949-1172047,1172520-1172591,1172791-1172949,117... 26 8.5
05_07_0018 + 27082661-27083845 26 8.5
04_04_1404 + 33302080-33303341,33303435-33305307 26 8.5
03_05_0632 + 26264150-26264195,26266139-26266623,26266650-262667... 26 8.5
03_02_0489 + 8836306-8836500,8836906-8837082,8837175-8837321,883... 26 8.5
01_01_0282 - 2349336-2349583,2349719-2349786,2349880-2349950,235... 26 8.5
>02_05_0538 + 29841801-29842280,29842559-29842930,29843013-29843309
Length = 382
Score = 34.3 bits (75), Expect = 0.024
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +3
Query: 276 AVSKTAVAPIERVKLLLQ 329
AVSKTA APIERVKLL+Q
Sbjct: 94 AVSKTAAAPIERVKLLIQ 111
>05_03_0396 - 13477465-13477761,13477970-13478341,13478414-13478887
Length = 380
Score = 33.9 bits (74), Expect = 0.032
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +3
Query: 276 AVSKTAVAPIERVKLLLQ 329
AVSKTA APIER+KLL+Q
Sbjct: 92 AVSKTAAAPIERIKLLIQ 109
>05_07_0283 -
28937027-28937110,28937211-28937549,28937641-28937754,
28937843-28937955,28939050-28939087,28939315-28939478,
28939746-28939794,28940986-28941152
Length = 355
Score = 32.7 bits (71), Expect = 0.074
Identities = 14/18 (77%), Positives = 18/18 (100%)
Frame = +3
Query: 279 VSKTAVAPIERVKLLLQV 332
VS+TAVAP+ER+K+LLQV
Sbjct: 56 VSRTAVAPLERMKILLQV 73
>01_05_0410 +
21914995-21915168,21915268-21915353,21915446-21915656,
21915869-21915998,21916740-21916924,21917014-21917145,
21917329-21917433
Length = 340
Score = 31.9 bits (69), Expect = 0.13
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +3
Query: 276 AVSKTAVAPIERVKLLLQ 329
A +KTAVAP+ERVK+LLQ
Sbjct: 41 AFAKTAVAPLERVKILLQ 58
>01_06_0447 +
29452194-29452361,29453232-29453317,29453403-29453610,
29454252-29454381,29454561-29454745,29454858-29454989,
29455747-29455851
Length = 337
Score = 31.5 bits (68), Expect = 0.17
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +3
Query: 276 AVSKTAVAPIERVKLLLQ 329
A SKTA+AP+ER+K+LLQ
Sbjct: 39 AFSKTAIAPLERLKILLQ 56
>02_02_0134 +
7082462-7082627,7084199-7084325,7084404-7084611,
7084864-7084990,7085071-7085255,7085332-7085454,
7085777-7085836,7085980-7086117
Length = 377
Score = 30.7 bits (66), Expect = 0.30
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +3
Query: 279 VSKTAVAPIERVKLLLQ 329
V+KTAVAP+ERVK+L Q
Sbjct: 38 VAKTAVAPLERVKILFQ 54
>11_06_0633 + 25681756-25682061,25682961-25683329,25683419-25683733
Length = 329
Score = 30.3 bits (65), Expect = 0.39
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 279 VSKTAVAPIERVKLLLQ 329
V+KT AP+ERVKLLLQ
Sbjct: 37 VAKTGAAPVERVKLLLQ 53
>07_03_0117 + 13589997-13590998
Length = 333
Score = 29.5 bits (63), Expect = 0.69
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +3
Query: 279 VSKTAVAPIERVKLLLQV 332
V+KTAVAP+ERV L+ QV
Sbjct: 54 VAKTAVAPLERVNLMRQV 71
>01_01_1139 -
9024609-9024708,9024832-9024910,9025083-9025252,
9025339-9025451,9025518-9025586,9025867-9025944,
9026022-9026084,9026590-9026670,9027166-9027222,
9027352-9027705
Length = 387
Score = 29.1 bits (62), Expect = 0.91
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +3
Query: 276 AVSKTAVAPIERVKLLLQ 329
AV+KT AP++RVKLL+Q
Sbjct: 101 AVAKTITAPLDRVKLLMQ 118
>07_03_0493 +
18747427-18748356,18748594-18748697,18749586-18749795,
18749992-18750597,18750819-18751095,18751163-18751310,
18751957-18752044,18752167-18752284
Length = 826
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -2
Query: 302 GCYGGLGDGAEIPPA 258
GC GG G GAE+PPA
Sbjct: 152 GCGGGAGCGAELPPA 166
>03_05_0791 +
27736978-27737217,27737648-27739191,27739512-27739763,
27739844-27739954,27740042-27740102,27740373-27740558
Length = 797
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +2
Query: 119 KNQELVFRDPPSACAATPTSTYSPSEDHIIEQNVEPRRSGRVR*GL 256
K + + F DP C T T +P DH+ +N P+ + GL
Sbjct: 604 KKEPIGFLDPTQICQTQHTVTLAPGSDHLKGKN--PKEIAEYKKGL 647
>05_04_0386 + 20822376-20822982,20823715-20824244,20824315-20825127
Length = 649
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -3
Query: 124 IFEQEIWSNFVITGAQRVGVCLF*NSIDHV 35
+FEQ I SN ++T A GV NS+ H+
Sbjct: 20 LFEQVIGSNVIVTEAPLTGVTAEGNSVLHI 49
>01_06_0063 +
26100877-26101144,26101683-26101990,26102133-26102849,
26103338-26103466,26103594-26103698,26103732-26103797,
26104102-26104302,26104437-26104562
Length = 639
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +2
Query: 149 PSACAATPTSTYSPSEDHIIEQNVEPRRSGRVR*GLWLAVSPRRLQDRRSTHRACQAA 322
PS+C ++ T T+ +I ++ PRR R + + RRL +R +H+ Q +
Sbjct: 264 PSSCISSATDTFPEIHHDVISASISPRRQ-RHDSPPSASTNTRRLLNRSFSHQYHQTS 320
>05_06_0233 +
26599068-26599466,26601214-26601829,26601871-26601917,
26602101-26602268
Length = 409
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +3
Query: 288 TAVAPIERVKLLLQ 329
T VAPIER KLLLQ
Sbjct: 64 TVVAPIERAKLLLQ 77
>05_01_0445 +
3547176-3547577,3548625-3549557,3550246-3550524,
3550624-3550752,3550813-3550869
Length = 599
Score = 26.6 bits (56), Expect = 4.9
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 147 PHPRVPQLPPRHIHLVKI 200
PHPR P L PR +H +++
Sbjct: 23 PHPRRPGLRPRRLHRLRL 40
>02_05_0243 -
27124559-27124864,27126922-27126990,27127741-27127926,
27128572-27129093
Length = 360
Score = 26.6 bits (56), Expect = 4.9
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +2
Query: 170 PTSTYSPSEDHIIEQNVEPRRSGRV 244
P S Y+ ++ ++ + +PRRSGRV
Sbjct: 248 PLSVYTHTDGELMAEFYQPRRSGRV 272
>04_03_0818 +
20014685-20014687,20014792-20014831,20014988-20015025,
20015359-20015485,20015571-20015797,20015919-20016064,
20016166-20016284,20016711-20016799,20016881-20017003,
20017123-20017158,20017464-20017562,20017642-20017833
Length = 412
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 332 YLEQQLDTLDGCYGGLGD 279
YL Q L LD CYG L D
Sbjct: 71 YLPQNLYCLDSCYGSLHD 88
>03_06_0763 +
36081546-36081669,36081755-36082170,36082280-36082339,
36082466-36083101
Length = 411
Score = 26.2 bits (55), Expect = 6.4
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 167 TPTSTYSPSEDHIIEQNVEPRRSGRVR 247
+P+S + ++ QN EPRRS R++
Sbjct: 368 SPSSLLQSGQSYLQNQNAEPRRSPRLQ 394
>02_01_0503 + 3669758-3670059,3670351-3670870
Length = 273
Score = 26.2 bits (55), Expect = 6.4
Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = +2
Query: 257 WLAVSP-RRLQDRRSTHRACQ 316
W VSP RR DRR H AC+
Sbjct: 128 WQQVSPSRRAADRRGRHLACR 148
>10_01_0097 - 1171949-1172047,1172520-1172591,1172791-1172949,
1172998-1173381,1173478-1175253,1175329-1175452,
1176859-1177027,1177131-1177226,1177339-1177527,
1177965-1179303
Length = 1468
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +3
Query: 150 HPRVPQLPPRHIHLVKIT*SNKMSNLADPVAFAKDS 257
HP++ + P RH + ++T S + L D A+ +D+
Sbjct: 1065 HPQIREFPSRHFYQGRLTDSESVVKLPDE-AYYRDA 1099
>05_07_0018 + 27082661-27083845
Length = 394
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +2
Query: 146 PPSACAATPTSTYSPSEDHIIEQNVEPRRSGRV 244
PP A++PTS+ S + +H+ ++ V P G++
Sbjct: 174 PPKHPASSPTSS-SAAREHLFDKTVTPSDVGKL 205
>04_04_1404 + 33302080-33303341,33303435-33305307
Length = 1044
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -2
Query: 287 LGDGAEIPPARVLSERDRIGEVRHFV 210
L DG+ +PP+R++SER G R F+
Sbjct: 7 LHDGSVLPPSRIVSER-HAGLPRRFM 31
>03_05_0632 +
26264150-26264195,26266139-26266623,26266650-26266739,
26266821-26267189
Length = 329
Score = 25.8 bits (54), Expect = 8.5
Identities = 8/29 (27%), Positives = 18/29 (62%)
Frame = +2
Query: 128 ELVFRDPPSACAATPTSTYSPSEDHIIEQ 214
E+ + PP+A +T T +P+ +H++ +
Sbjct: 156 EMAYGSPPAAGGSTTRKTSAPTLEHVVAE 184
>03_02_0489 +
8836306-8836500,8836906-8837082,8837175-8837321,
8837636-8837737,8837824-8837894,8837992-8838059,
8838595-8838836
Length = 333
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 276 AVSKTAVAPIERVKLLLQV 332
AVSKT AP+ R+ +L QV
Sbjct: 48 AVSKTCTAPLARLTILFQV 66
>01_01_0282 -
2349336-2349583,2349719-2349786,2349880-2349950,
2350022-2350123,2350309-2350449,2350540-2350716,
2352228-2352338
Length = 305
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 276 AVSKTAVAPIERVKLLLQV 332
AVSKT AP+ R+ +L QV
Sbjct: 20 AVSKTCTAPLARLTILFQV 38
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,966,062
Number of Sequences: 37544
Number of extensions: 214424
Number of successful extensions: 715
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 715
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 459426840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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