Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0156
(333 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82059-8|CAD89757.1| 207|Caenorhabditis elegans Hypothetical pr... 38 0.001
Z82059-7|CAD89756.1| 128|Caenorhabditis elegans Hypothetical pr... 38 0.001
Z82059-6|CAB04874.1| 300|Caenorhabditis elegans Hypothetical pr... 38 0.001
Z68218-2|CAA92472.1| 313|Caenorhabditis elegans Hypothetical pr... 38 0.001
X76112-1|CAA53718.1| 300|Caenorhabditis elegans ADP/ATP translo... 38 0.001
U80931-5|AAB38001.1| 313|Caenorhabditis elegans Hypothetical pr... 38 0.001
AF003141-4|AAK21485.1| 300|Caenorhabditis elegans Hypothetical ... 38 0.002
U64842-4|AAB37086.2| 306|Caenorhabditis elegans Hypothetical pr... 36 0.009
Z68882-2|CAA93110.1| 306|Caenorhabditis elegans Hypothetical pr... 35 0.016
Z49207-2|CAA89069.1| 298|Caenorhabditis elegans Hypothetical pr... 29 0.61
AF125953-1|AAD14702.2| 397|Caenorhabditis elegans Temporarily a... 28 1.9
Z81553-2|CAB04491.2| 373|Caenorhabditis elegans Hypothetical pr... 27 2.5
U29154-2|AAA68418.2| 220|Caenorhabditis elegans Hypothetical pr... 27 2.5
Z66511-2|CAA91315.1| 725|Caenorhabditis elegans Hypothetical pr... 26 5.7
Z50873-3|CAA90761.4| 531|Caenorhabditis elegans Hypothetical pr... 26 5.7
Z99266-1|CAB16464.1| 292|Caenorhabditis elegans F15C11.2 protein. 26 7.5
Z98262-3|CAD44156.1| 454|Caenorhabditis elegans Hypothetical pr... 26 7.5
Z98262-1|CAB10932.1| 502|Caenorhabditis elegans Hypothetical pr... 26 7.5
Z82268-9|CAD89738.1| 509|Caenorhabditis elegans Hypothetical pr... 26 7.5
Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical pr... 26 7.5
Z71260-4|CAD44116.1| 454|Caenorhabditis elegans Hypothetical pr... 26 7.5
Z71260-2|CAA95799.1| 502|Caenorhabditis elegans Hypothetical pr... 26 7.5
AL023835-17|CAD89760.1| 509|Caenorhabditis elegans Hypothetical... 26 7.5
AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical... 26 7.5
Z92817-1|CAB07296.1| 367|Caenorhabditis elegans Hypothetical pr... 25 10.0
AF125971-9|AAD14764.1| 442|Caenorhabditis elegans Hypothetical ... 25 10.0
AC025726-14|AAK73912.2| 508|Caenorhabditis elegans Hypothetical... 25 10.0
>Z82059-8|CAD89757.1| 207|Caenorhabditis elegans Hypothetical
protein T27E9.1c protein.
Length = 207
Score = 38.3 bits (85), Expect = 0.001
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 276 AVSKTAVAPIERVKLLLQV 332
AVSKTAVAPIERVKLLLQV
Sbjct: 24 AVSKTAVAPIERVKLLLQV 42
>Z82059-7|CAD89756.1| 128|Caenorhabditis elegans Hypothetical
protein T27E9.1b protein.
Length = 128
Score = 38.3 bits (85), Expect = 0.001
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 276 AVSKTAVAPIERVKLLLQV 332
AVSKTAVAPIERVKLLLQV
Sbjct: 24 AVSKTAVAPIERVKLLLQV 42
>Z82059-6|CAB04874.1| 300|Caenorhabditis elegans Hypothetical
protein T27E9.1a protein.
Length = 300
Score = 38.3 bits (85), Expect = 0.001
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 276 AVSKTAVAPIERVKLLLQV 332
AVSKTAVAPIERVKLLLQV
Sbjct: 24 AVSKTAVAPIERVKLLLQV 42
>Z68218-2|CAA92472.1| 313|Caenorhabditis elegans Hypothetical
protein K01H12.2 protein.
Length = 313
Score = 38.3 bits (85), Expect = 0.001
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 276 AVSKTAVAPIERVKLLLQV 332
AVSKTAVAPIERVKLLLQV
Sbjct: 37 AVSKTAVAPIERVKLLLQV 55
>X76112-1|CAA53718.1| 300|Caenorhabditis elegans ADP/ATP
translocase protein.
Length = 300
Score = 38.3 bits (85), Expect = 0.001
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 276 AVSKTAVAPIERVKLLLQV 332
AVSKTAVAPIERVKLLLQV
Sbjct: 24 AVSKTAVAPIERVKLLLQV 42
>U80931-5|AAB38001.1| 313|Caenorhabditis elegans Hypothetical
protein T01B11.4 protein.
Length = 313
Score = 38.3 bits (85), Expect = 0.001
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 276 AVSKTAVAPIERVKLLLQV 332
AVSKTAVAPIERVKLLLQV
Sbjct: 37 AVSKTAVAPIERVKLLLQV 55
>AF003141-4|AAK21485.1| 300|Caenorhabditis elegans Hypothetical
protein W02D3.6 protein.
Length = 300
Score = 37.9 bits (84), Expect = 0.002
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +3
Query: 276 AVSKTAVAPIERVKLLLQV 332
A+SKTAVAPIERVKLLLQV
Sbjct: 24 AISKTAVAPIERVKLLLQV 42
>U64842-4|AAB37086.2| 306|Caenorhabditis elegans Hypothetical
protein F25B4.7 protein.
Length = 306
Score = 35.5 bits (78), Expect = 0.009
Identities = 17/35 (48%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +3
Query: 231 DPVAFAKD-SGWRYLRAVSKTAVAPIERVKLLLQV 332
D + F+KD A+SKT +AP+ERVKL+LQ+
Sbjct: 14 DVIKFSKDFMAGATAAAISKTVIAPVERVKLILQL 48
>Z68882-2|CAA93110.1| 306|Caenorhabditis elegans Hypothetical
protein C47E12.2 protein.
Length = 306
Score = 34.7 bits (76), Expect = 0.016
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +3
Query: 276 AVSKTAVAPIERVKLLLQV 332
+VSKT VAPIERVK+LLQV
Sbjct: 33 SVSKTVVAPIERVKILLQV 51
>Z49207-2|CAA89069.1| 298|Caenorhabditis elegans Hypothetical
protein R07E3.4 protein.
Length = 298
Score = 29.5 bits (63), Expect = 0.61
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +3
Query: 276 AVSKTAVAPIERVKLLLQV 332
A+SKT AP +RVKL+LQ+
Sbjct: 25 AISKTTTAPFDRVKLVLQL 43
>AF125953-1|AAD14702.2| 397|Caenorhabditis elegans Temporarily
assigned gene nameprotein 304 protein.
Length = 397
Score = 27.9 bits (59), Expect = 1.9
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +2
Query: 71 YPLCSRDYEITPNL-LFKNQELVFRDPPSACA-ATPTSTYSPSEDHIIEQNVE 223
YPL RD + PN L FR P A A P+ST SE H ++VE
Sbjct: 105 YPLMKRD-NVFPNFALPTTTRAAFRIGPQPIASADPSSTPGSSEHHSDTEDVE 156
>Z81553-2|CAB04491.2| 373|Caenorhabditis elegans Hypothetical
protein F56H6.2 protein.
Length = 373
Score = 27.5 bits (58), Expect = 2.5
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 69 PTLCAPVITKLLQISCSKIRS*CFVIPHPRVPQLPPRHI 185
PTL P + L + +C K+ S + P+LPP+ I
Sbjct: 89 PTLPVPTLRMLNEPTCQKVFSSWLKVSKEPQPKLPPKKI 127
>U29154-2|AAA68418.2| 220|Caenorhabditis elegans Hypothetical
protein T07F12.2 protein.
Length = 220
Score = 27.5 bits (58), Expect = 2.5
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 107 NLLFKNQELVFRDPPSACAATPTSTYSPS 193
N F+N E+V DP C A ++PS
Sbjct: 150 NKTFRNLEMVLADPVHGCEALRNEIFAPS 178
>Z66511-2|CAA91315.1| 725|Caenorhabditis elegans Hypothetical
protein F07A11.2a protein.
Length = 725
Score = 26.2 bits (55), Expect = 5.7
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +3
Query: 189 LVKIT*SNKMSNLADPVAFAKDSGWRY 269
LV I ++++ PV+F+KD+GW++
Sbjct: 205 LVGIKSNSRLQTNHFPVSFSKDAGWKW 231
>Z50873-3|CAA90761.4| 531|Caenorhabditis elegans Hypothetical
protein F17E5.2 protein.
Length = 531
Score = 26.2 bits (55), Expect = 5.7
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +3
Query: 276 AVSKTAVAPIERVKLLLQV 332
A+S+T AP +R+K+ LQV
Sbjct: 256 AMSRTCTAPFDRIKVYLQV 274
>Z99266-1|CAB16464.1| 292|Caenorhabditis elegans F15C11.2 protein.
Length = 292
Score = 25.8 bits (54), Expect = 7.5
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 101 TPNLLFKNQELVFRDPPSACAATPTSTYSPSED 199
T +L+ +NQ R P+ AATPT++ +PS +
Sbjct: 73 TVHLVIRNQA---RPTPAPAAATPTASSAPSSN 102
>Z98262-3|CAD44156.1| 454|Caenorhabditis elegans Hypothetical
protein F15C11.2c protein.
Length = 454
Score = 25.8 bits (54), Expect = 7.5
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 101 TPNLLFKNQELVFRDPPSACAATPTSTYSPSED 199
T +L+ +NQ R P+ AATPT++ +PS +
Sbjct: 73 TVHLVIRNQA---RPTPAPAAATPTASSAPSSN 102
>Z98262-1|CAB10932.1| 502|Caenorhabditis elegans Hypothetical
protein F15C11.2a protein.
Length = 502
Score = 25.8 bits (54), Expect = 7.5
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 101 TPNLLFKNQELVFRDPPSACAATPTSTYSPSED 199
T +L+ +NQ R P+ AATPT++ +PS +
Sbjct: 73 TVHLVIRNQA---RPTPAPAAATPTASSAPSSN 102
>Z82268-9|CAD89738.1| 509|Caenorhabditis elegans Hypothetical
protein Y37A1B.1b protein.
Length = 509
Score = 25.8 bits (54), Expect = 7.5
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +2
Query: 134 VFRDPPSACAATPTSTYSPSEDHIIEQNVEPRRSGRVR*GLWL-AVSPRRLQDRRSTHRA 310
V R PP AA+P SPS ++ E SG V + + SP R + R
Sbjct: 262 VRRSPPPRRAASPRKASSPSAPAKNDRKRERSPSGSVAPSVRRESASPPRRRARIIPRYE 321
Query: 311 CQAAAPS 331
C+A P+
Sbjct: 322 CRAQKPA 328
>Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 25.8 bits (54), Expect = 7.5
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +2
Query: 134 VFRDPPSACAATPTSTYSPSEDHIIEQNVEPRRSGRVR*GLWL-AVSPRRLQDRRSTHRA 310
V R PP AA+P SPS ++ E SG V + + SP R + R
Sbjct: 262 VRRSPPPRRAASPRKASSPSAPAKNDRKRERSPSGSVAPSVRRESASPPRRRARIIPRYE 321
Query: 311 CQAAAPS 331
C+A P+
Sbjct: 322 CRAQKPA 328
>Z71260-4|CAD44116.1| 454|Caenorhabditis elegans Hypothetical
protein F15C11.2c protein.
Length = 454
Score = 25.8 bits (54), Expect = 7.5
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 101 TPNLLFKNQELVFRDPPSACAATPTSTYSPSED 199
T +L+ +NQ R P+ AATPT++ +PS +
Sbjct: 73 TVHLVIRNQA---RPTPAPAAATPTASSAPSSN 102
>Z71260-2|CAA95799.1| 502|Caenorhabditis elegans Hypothetical
protein F15C11.2a protein.
Length = 502
Score = 25.8 bits (54), Expect = 7.5
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 101 TPNLLFKNQELVFRDPPSACAATPTSTYSPSED 199
T +L+ +NQ R P+ AATPT++ +PS +
Sbjct: 73 TVHLVIRNQA---RPTPAPAAATPTASSAPSSN 102
>AL023835-17|CAD89760.1| 509|Caenorhabditis elegans Hypothetical
protein Y37A1B.1b protein.
Length = 509
Score = 25.8 bits (54), Expect = 7.5
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +2
Query: 134 VFRDPPSACAATPTSTYSPSEDHIIEQNVEPRRSGRVR*GLWL-AVSPRRLQDRRSTHRA 310
V R PP AA+P SPS ++ E SG V + + SP R + R
Sbjct: 262 VRRSPPPRRAASPRKASSPSAPAKNDRKRERSPSGSVAPSVRRESASPPRRRARIIPRYE 321
Query: 311 CQAAAPS 331
C+A P+
Sbjct: 322 CRAQKPA 328
>AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 25.8 bits (54), Expect = 7.5
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +2
Query: 134 VFRDPPSACAATPTSTYSPSEDHIIEQNVEPRRSGRVR*GLWL-AVSPRRLQDRRSTHRA 310
V R PP AA+P SPS ++ E SG V + + SP R + R
Sbjct: 262 VRRSPPPRRAASPRKASSPSAPAKNDRKRERSPSGSVAPSVRRESASPPRRRARIIPRYE 321
Query: 311 CQAAAPS 331
C+A P+
Sbjct: 322 CRAQKPA 328
>Z92817-1|CAB07296.1| 367|Caenorhabditis elegans Hypothetical
protein W08G11.1 protein.
Length = 367
Score = 25.4 bits (53), Expect = 10.0
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +3
Query: 69 PTLCAPVITKLLQISCSKIRS*CFVIPHPRVPQLPPRHI 185
PTL P + L + +C ++ S I P +PP+ I
Sbjct: 82 PTLPVPTLRMLNEPTCDEVFSEWLRISEEPQPDIPPKEI 120
>AF125971-9|AAD14764.1| 442|Caenorhabditis elegans Hypothetical
protein Y4C6B.1 protein.
Length = 442
Score = 25.4 bits (53), Expect = 10.0
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +3
Query: 69 PTLCAPVITKLLQISCSKIRS*CFVIPHPRVPQLP--PRHIHLVKIT*SNKMSNL 227
P++C+P + + ++ C P P P LP + I L +I NK+S +
Sbjct: 290 PSVCSPSSSSKTSTASVQLAPMCMAPPPPPPPPLPKMSQKIPLSEIKSDNKLSTV 344
>AC025726-14|AAK73912.2| 508|Caenorhabditis elegans Hypothetical
protein Y71G12B.13 protein.
Length = 508
Score = 25.4 bits (53), Expect = 10.0
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +3
Query: 54 QKRHTPTLCAPVITKLLQISCSKIRS*CFVIPHPRVPQLPPRHIHLVKIT*SN 212
QK P P + ++Q + K R C IP PR+ +LP ++ +L +T +N
Sbjct: 48 QKCQFPMDMPPHVYHVVQTAFQK-RQKC--IPLPRIEKLPEKYQYLYPLTFAN 97
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,938,072
Number of Sequences: 27780
Number of extensions: 166419
Number of successful extensions: 431
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 430
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 408121444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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