Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0146
         (413 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003641-1|AAO39645.1|  434|Drosophila melanogaster AT14896p pro...    28   4.3  
AE014134-1662|AAF52791.1|  564|Drosophila melanogaster CG3841-PA...    28   4.3  

>BT003641-1|AAO39645.1|  434|Drosophila melanogaster AT14896p
           protein.
          Length = 434

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -3

Query: 324 NFNKITLILIITYDEFQKESN-HLRTQRYL 238
           NFNK+ L++  T +EF   +N HL  Q  L
Sbjct: 187 NFNKVPLLISFTANEFDYNANVHLENQHLL 216


>AE014134-1662|AAF52791.1|  564|Drosophila melanogaster CG3841-PA
           protein.
          Length = 564

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -3

Query: 324 NFNKITLILIITYDEFQKESN-HLRTQRYL 238
           NFNK+ L++  T +EF   +N HL  Q  L
Sbjct: 317 NFNKVPLLISFTANEFDYNANVHLENQHLL 346


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,277,793
Number of Sequences: 53049
Number of extensions: 157066
Number of successful extensions: 99
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 99
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1230182214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)