Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0141
         (667 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113636-1|AAM29641.1|  336|Drosophila melanogaster RH73327p pro...   154   1e-37
AY070974-1|AAL48596.1|  336|Drosophila melanogaster RE07422p pro...   154   1e-37
AE013599-448|AAF59231.1|  336|Drosophila melanogaster CG1598-PA ...   154   1e-37
BT001458-1|AAN71213.1|  119|Drosophila melanogaster GM18141p pro...    84   2e-16

>AY113636-1|AAM29641.1|  336|Drosophila melanogaster RH73327p
           protein.
          Length = 336

 Score =  154 bits (373), Expect = 1e-37
 Identities = 70/84 (83%), Positives = 77/84 (91%)
 Frame = +2

Query: 257 DAFDQKFSKVPTKVKGFDNLFAMEIDPNVGLTELPEEYFEGESEAMRLDKGVMQEIVGAF 436
           DAFDQKF+KVPTKV GFDNLFAMEIDPN GL ELPEEYF+GE+EA+R+ KGVMQE++ A 
Sbjct: 65  DAFDQKFTKVPTKVNGFDNLFAMEIDPNAGLNELPEEYFDGENEALRVSKGVMQEMINAL 124

Query: 437 PGIDEAMSYAEVMKLVKGMNFSAV 508
           PGIDEAMSYAEVMKLVKGMNFS V
Sbjct: 125 PGIDEAMSYAEVMKLVKGMNFSVV 148



 Score = 87.0 bits (206), Expect = 2e-17
 Identities = 37/53 (69%), Positives = 47/53 (88%)
 Frame = +1

Query: 508 MFDTAPTGHTLRLLSFPQVVERGLGKLMRLKSKVAPFINQIASLFGLADFNSD 666
           +FDTAPTGHTLRL++FPQVVE+GLGKL+RLK KVAP ++Q  S+ G+AD N+D
Sbjct: 149 VFDTAPTGHTLRLIAFPQVVEKGLGKLLRLKMKVAPLLSQFVSMLGMADVNAD 201



 Score = 86.6 bits (205), Expect = 3e-17
 Identities = 43/77 (55%), Positives = 52/77 (67%)
 Frame = +3

Query: 75  DFEPLEPSLKNVIDQKSLRWIFXXXXXXXXXXXCSCSLAVQLSKVRESVLIISTDPAHNI 254
           + EPLEPSL+N+++Q SL+WIF           CS SLAVQLSKVRESVLIISTDPAHNI
Sbjct: 4   NLEPLEPSLQNLVEQDSLKWIFVGGKGGVGKTTCSSSLAVQLSKVRESVLIISTDPAHNI 63

Query: 255 LMHSTRNFLKYQQRLKG 305
                + F K   ++ G
Sbjct: 64  SDAFDQKFTKVPTKVNG 80


>AY070974-1|AAL48596.1|  336|Drosophila melanogaster RE07422p
           protein.
          Length = 336

 Score =  154 bits (373), Expect = 1e-37
 Identities = 70/84 (83%), Positives = 77/84 (91%)
 Frame = +2

Query: 257 DAFDQKFSKVPTKVKGFDNLFAMEIDPNVGLTELPEEYFEGESEAMRLDKGVMQEIVGAF 436
           DAFDQKF+KVPTKV GFDNLFAMEIDPN GL ELPEEYF+GE+EA+R+ KGVMQE++ A 
Sbjct: 65  DAFDQKFTKVPTKVNGFDNLFAMEIDPNAGLNELPEEYFDGENEALRVSKGVMQEMINAL 124

Query: 437 PGIDEAMSYAEVMKLVKGMNFSAV 508
           PGIDEAMSYAEVMKLVKGMNFS V
Sbjct: 125 PGIDEAMSYAEVMKLVKGMNFSVV 148



 Score = 87.0 bits (206), Expect = 2e-17
 Identities = 37/53 (69%), Positives = 47/53 (88%)
 Frame = +1

Query: 508 MFDTAPTGHTLRLLSFPQVVERGLGKLMRLKSKVAPFINQIASLFGLADFNSD 666
           +FDTAPTGHTLRL++FPQVVE+GLGKL+RLK KVAP ++Q  S+ G+AD N+D
Sbjct: 149 VFDTAPTGHTLRLIAFPQVVEKGLGKLLRLKMKVAPLLSQFVSMLGMADVNAD 201



 Score = 86.6 bits (205), Expect = 3e-17
 Identities = 43/77 (55%), Positives = 52/77 (67%)
 Frame = +3

Query: 75  DFEPLEPSLKNVIDQKSLRWIFXXXXXXXXXXXCSCSLAVQLSKVRESVLIISTDPAHNI 254
           + EPLEPSL+N+++Q SL+WIF           CS SLAVQLSKVRESVLIISTDPAHNI
Sbjct: 4   NLEPLEPSLQNLVEQDSLKWIFVGGKGGVGKTTCSSSLAVQLSKVRESVLIISTDPAHNI 63

Query: 255 LMHSTRNFLKYQQRLKG 305
                + F K   ++ G
Sbjct: 64  SDAFDQKFTKVPTKVNG 80


>AE013599-448|AAF59231.1|  336|Drosophila melanogaster CG1598-PA
           protein.
          Length = 336

 Score =  154 bits (373), Expect = 1e-37
 Identities = 70/84 (83%), Positives = 77/84 (91%)
 Frame = +2

Query: 257 DAFDQKFSKVPTKVKGFDNLFAMEIDPNVGLTELPEEYFEGESEAMRLDKGVMQEIVGAF 436
           DAFDQKF+KVPTKV GFDNLFAMEIDPN GL ELPEEYF+GE+EA+R+ KGVMQE++ A 
Sbjct: 65  DAFDQKFTKVPTKVNGFDNLFAMEIDPNAGLNELPEEYFDGENEALRVSKGVMQEMINAL 124

Query: 437 PGIDEAMSYAEVMKLVKGMNFSAV 508
           PGIDEAMSYAEVMKLVKGMNFS V
Sbjct: 125 PGIDEAMSYAEVMKLVKGMNFSVV 148



 Score = 87.0 bits (206), Expect = 2e-17
 Identities = 37/53 (69%), Positives = 47/53 (88%)
 Frame = +1

Query: 508 MFDTAPTGHTLRLLSFPQVVERGLGKLMRLKSKVAPFINQIASLFGLADFNSD 666
           +FDTAPTGHTLRL++FPQVVE+GLGKL+RLK KVAP ++Q  S+ G+AD N+D
Sbjct: 149 VFDTAPTGHTLRLIAFPQVVEKGLGKLLRLKMKVAPLLSQFVSMLGMADVNAD 201



 Score = 86.6 bits (205), Expect = 3e-17
 Identities = 43/77 (55%), Positives = 52/77 (67%)
 Frame = +3

Query: 75  DFEPLEPSLKNVIDQKSLRWIFXXXXXXXXXXXCSCSLAVQLSKVRESVLIISTDPAHNI 254
           + EPLEPSL+N+++Q SL+WIF           CS SLAVQLSKVRESVLIISTDPAHNI
Sbjct: 4   NLEPLEPSLQNLVEQDSLKWIFVGGKGGVGKTTCSSSLAVQLSKVRESVLIISTDPAHNI 63

Query: 255 LMHSTRNFLKYQQRLKG 305
                + F K   ++ G
Sbjct: 64  SDAFDQKFTKVPTKVNG 80


>BT001458-1|AAN71213.1|  119|Drosophila melanogaster GM18141p
           protein.
          Length = 119

 Score = 83.8 bits (198), Expect = 2e-16
 Identities = 40/60 (66%), Positives = 46/60 (76%)
 Frame = +3

Query: 75  DFEPLEPSLKNVIDQKSLRWIFXXXXXXXXXXXCSCSLAVQLSKVRESVLIISTDPAHNI 254
           + EPLEPSL+N+++Q SL+WIF           CS SLAVQLSKVRESVLIISTDPAHNI
Sbjct: 4   NLEPLEPSLQNLVEQDSLKWIFVGGKGGVGKTTCSSSLAVQLSKVRESVLIISTDPAHNI 63


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,030,023
Number of Sequences: 53049
Number of extensions: 464630
Number of successful extensions: 1389
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1389
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2868730650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)