Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0140
(653 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q25490 Cluster: Apolipophorins precursor [Contains: Apo... 61 3e-08
UniRef50_UPI0000DB72C7 Cluster: PREDICTED: similar to Retinoid- ... 54 2e-06
UniRef50_Q9U943 Cluster: Apolipophorins precursor [Contains: Apo... 54 4e-06
UniRef50_UPI00015B417B Cluster: PREDICTED: similar to apolipopho... 53 7e-06
UniRef50_Q9V496 Cluster: Apolipophorins precursor (Retinoid- and... 40 0.039
UniRef50_Q2PZ06 Cluster: Lipophorin; n=1; Glossina morsitans mor... 38 0.21
UniRef50_Q73M69 Cluster: 3-dehydroquinate dehydratase, type 1, p... 36 0.85
UniRef50_Q3IKC7 Cluster: DNA helicase II; n=2; Bacteria|Rep: DNA... 36 0.85
UniRef50_Q383B3 Cluster: Putative uncharacterized protein; n=4; ... 34 3.4
UniRef50_A7AT70 Cluster: Putative uncharacterized protein; n=1; ... 34 3.4
UniRef50_Q0UBD2 Cluster: Putative uncharacterized protein; n=1; ... 34 3.4
UniRef50_A4J265 Cluster: Putative uncharacterized protein; n=1; ... 33 6.0
>UniRef50_Q25490 Cluster: Apolipophorins precursor [Contains:
Apolipophorin-2 (Apolipophorin II) (apoLp-2);
Apolipophorin-1 (Apolipophorin I) (apoLp-1)]; n=5;
Ditrysia|Rep: Apolipophorins precursor [Contains:
Apolipophorin-2 (Apolipophorin II) (apoLp-2);
Apolipophorin-1 (Apolipophorin I) (apoLp-1)] - Manduca
sexta (Tobacco hawkmoth) (Tobacco hornworm)
Length = 3305
Score = 60.9 bits (141), Expect = 3e-08
Identities = 29/58 (50%), Positives = 32/58 (55%)
Frame = +2
Query: 275 DMSPFRQACIHAVTGTDAXKDLHEACDLGRGMAALALTGLLPAVLPNVCVKCTDADKP 448
D++PFRQACIHAVTG DA KDL +ACDL RG G P P A P
Sbjct: 2937 DIAPFRQACIHAVTGADADKDLQQACDLARGYRRSRSRGCCPPRCPTPACAARTATGP 2994
Score = 55.6 bits (128), Expect = 1e-06
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = +1
Query: 559 PLVSHLIDSLKSKHITDVKXFLVGHTSKYPY 651
PLVS L+D LK KH TD+K FLVGHTSK+PY
Sbjct: 3032 PLVSQLVDMLKGKHCTDIKVFLVGHTSKHPY 3062
>UniRef50_UPI0000DB72C7 Cluster: PREDICTED: similar to Retinoid- and
fatty-acid binding protein CG11064-PA isoform 1; n=1;
Apis mellifera|Rep: PREDICTED: similar to Retinoid- and
fatty-acid binding protein CG11064-PA isoform 1 - Apis
mellifera
Length = 3360
Score = 54.4 bits (125), Expect = 2e-06
Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Frame = +2
Query: 281 SPFRQACIHAVT-GTDAXKDLHEACDLGRGMA-ALALTGLLPAVLPNVCVKCTDADKPRD 454
S +R AC HA+ GT A AC + A G++ +P+ C C D
Sbjct: 2989 SLYRDACDHAIAAGTPAG-----ACIIAMAYHYACYAQGVMSTYIPSSCTNCKVGGNKID 3043
Query: 455 IGDSYEFKVPNKQADIILQXETTESNAKTYKDIV 556
+GDS+ KVP K+AD+I E N K YK+++
Sbjct: 3044 MGDSFSVKVPKKEADVIFVIEQQIPNDKVYKEMI 3077
>UniRef50_Q9U943 Cluster: Apolipophorins precursor [Contains:
Apolipophorin-2 (Apolipophorin II) (apoLp-2);
Apolipophorin-1 (Apolipophorin I) (apoLp-1)]; n=2;
cellular organisms|Rep: Apolipophorins precursor
[Contains: Apolipophorin-2 (Apolipophorin II) (apoLp-2);
Apolipophorin-1 (Apolipophorin I) (apoLp-1)] - Locusta
migratoria (Migratory locust)
Length = 3380
Score = 53.6 bits (123), Expect = 4e-06
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Frame = +2
Query: 275 DMSPFRQACIHAV--TGTDAXKDLHEACDLGRGMAALALTGLLPAVLPNVCVKCT-DADK 445
D +P+ +AC H T K L + A ++ + +V P+ CV C+ + D
Sbjct: 3014 DPAPYLEACSHIAHEATTKEEKQLAACRTAAAYVQACSVENVFVSVPPH-CVHCSVNGDA 3072
Query: 446 PRDIGDSYEFKVPNKQADIILQXETTESNAKTYKDIV 556
DIG S+ KVP K ADI++ E NA+T KD V
Sbjct: 3073 AIDIGQSFSVKVPQKSADILIVLEQVTGNAETVKDFV 3109
>UniRef50_UPI00015B417B Cluster: PREDICTED: similar to apolipophorin;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
apolipophorin - Nasonia vitripennis
Length = 3385
Score = 52.8 bits (121), Expect = 7e-06
Identities = 34/106 (32%), Positives = 48/106 (45%)
Frame = +2
Query: 239 KIKIGPRHTYKKDMSPFRQACIHAVTGTDAXKDLHEACDLGRGMAALALTGLLPAVLPNV 418
K + P Y D FR +C V + K+ C + L + LPN
Sbjct: 2998 KSSLNPCFNYV-DSKIFRSSCDQLVA--NGVKN--GPCIAASSYVSACLVQNILVSLPND 3052
Query: 419 CVKCTDADKPRDIGDSYEFKVPNKQADIILQXETTESNAKTYKDIV 556
CV+C AD + GDS+ K+P KQADII E N K +K+++
Sbjct: 3053 CVQCKVADAMINGGDSFSVKIPKKQADIIFVVEQAADNEKAFKELI 3098
>UniRef50_Q9V496 Cluster: Apolipophorins precursor (Retinoid- and
fatty acid-binding glycoprotein) [Contains:
Apolipophorin-2 (Apolipophorin II) (ApoL2);
Apolipophorin-1 (Apolipophorin I) (ApoL1)]; n=11;
Eukaryota|Rep: Apolipophorins precursor (Retinoid- and
fatty acid-binding glycoprotein) [Contains:
Apolipophorin-2 (Apolipophorin II) (ApoL2);
Apolipophorin-1 (Apolipophorin I) (ApoL1)] - Drosophila
melanogaster (Fruit fly)
Length = 3351
Score = 40.3 bits (90), Expect = 0.039
Identities = 20/77 (25%), Positives = 32/77 (41%)
Frame = +2
Query: 275 DMSPFRQACIHAVTGTDAXKDLHEACDLGRGMAALALTGLLPAVLPNVCVKCTDADKPRD 454
D P+R+AC A+ + AC + +LP C+KC D
Sbjct: 2986 DSRPYRKACDIALAKVAEKEKEATACTFALAYGSAVKQINKWVLLPPRCIKCAGPAGQHD 3045
Query: 455 IGDSYEFKVPNKQADII 505
GD + K+PN + D++
Sbjct: 3046 FGDEFTVKLPNNKVDVV 3062
>UniRef50_Q2PZ06 Cluster: Lipophorin; n=1; Glossina morsitans
morsitans|Rep: Lipophorin - Glossina morsitans morsitans
(Savannah tsetse fly)
Length = 835
Score = 37.9 bits (84), Expect = 0.21
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +2
Query: 272 KDMSPFRQACIHAVTGTDAXKDLHEA-CDLGRGMAALALTGL-LPAV-LPNVCVKCTDAD 442
KD S ++ AC AV A KD A C++ A+ L P + LP C+KC A
Sbjct: 464 KDPSLYQTACDQAVASA-ADKDKETAACNIALTYASGIKKKLDHPFIFLPERCLKCGGAP 522
Query: 443 KPRDIGDSYEFKVPNKQADII 505
RD+ + + K P ADI+
Sbjct: 523 GQRDLFEDFTVKTPESSADIV 543
>UniRef50_Q73M69 Cluster: 3-dehydroquinate dehydratase, type 1,
putative/shikimate 5- dehydrogenase, putative; n=1;
Treponema denticola|Rep: 3-dehydroquinate dehydratase,
type 1, putative/shikimate 5- dehydrogenase, putative -
Treponema denticola
Length = 493
Score = 35.9 bits (79), Expect = 0.85
Identities = 19/71 (26%), Positives = 37/71 (52%)
Frame = +2
Query: 266 YKKDMSPFRQACIHAVTGTDAXKDLHEACDLGRGMAALALTGLLPAVLPNVCVKCTDADK 445
Y D+ F+QA + + D K ++ +G G AA A+ ++ ++ C+ A+K
Sbjct: 331 YNTDVDGFQQALMEFLNEKDLRK--YKVAIIGAGGAARAVAEVISSLHGKACIFNRTAEK 388
Query: 446 PRDIGDSYEFK 478
++I + Y+FK
Sbjct: 389 AKNIAEKYKFK 399
>UniRef50_Q3IKC7 Cluster: DNA helicase II; n=2; Bacteria|Rep: DNA
helicase II - Pseudoalteromonas haloplanktis (strain TAC
125)
Length = 615
Score = 35.9 bits (79), Expect = 0.85
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = -2
Query: 367 SSSQITSFVQIFXGVCAGDGVNTRLSERRHVLFICVSWSYLNLEIKLVCSSHK 209
+S + SF ++ AGDG +L+ R + ++C S + +NL I L C K
Sbjct: 540 ASWNMYSFNKLLTPAAAGDGTEGQLARSRKLAYVCFSRARMNLRIFLYCQDAK 592
>UniRef50_Q383B3 Cluster: Putative uncharacterized protein; n=4;
Trypanosoma|Rep: Putative uncharacterized protein -
Trypanosoma brucei
Length = 598
Score = 33.9 bits (74), Expect = 3.4
Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Frame = -2
Query: 466 AISDVPRLICISTLXAYVRKYGREKAGQG--QSCHSSSQITSFVQ---IFXGVCAGDGVN 302
A++ V +C+ R GR+ AG G + TS Q I V GD V
Sbjct: 215 ALATVAYFLCLWNAPNQER--GRKAAGGGGCEGDEDGEAATSMYQVRVIAARVLWGDTVQ 272
Query: 301 TRLSERRHVLFICVSWSYLNL 239
T+ S R H L C+ W YL+L
Sbjct: 273 TKTSARSHPLRECLPWCYLSL 293
>UniRef50_A7AT70 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 1138
Score = 33.9 bits (74), Expect = 3.4
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 245 KIGPRHTYKKDMSPFRQACIHAVTGTDAXKDLHEACDLGRGM 370
+I +H K+D SP C+ + T DLH A D+ RG+
Sbjct: 673 EINHKHLMKRDTSPQVSICVSSDEQTSPRNDLHTATDIPRGI 714
>UniRef50_Q0UBD2 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 696
Score = 33.9 bits (74), Expect = 3.4
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +3
Query: 273 RTCRLSDKRVFTPSPAQTPXKICTKLVIWDEEWQLWP*P 389
+T + +K+ T PAQTP K +V +EEW W P
Sbjct: 539 KTSAVHNKKTHTNKPAQTPQKQTQSVVDEEEEWDNWETP 577
>UniRef50_A4J265 Cluster: Putative uncharacterized protein; n=1;
Desulfotomaculum reducens MI-1|Rep: Putative
uncharacterized protein - Desulfotomaculum reducens MI-1
Length = 240
Score = 33.1 bits (72), Expect = 6.0
Identities = 17/75 (22%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = -2
Query: 307 VNTRLSERRHVLFICVSWSYLNLEIKLVCSSHKKXCK*MEYNTKLIKHVIVLREQISQ*E 128
V T + E+ ++LF SW Y L + L ++H++ M Y L++ ++ +++ +
Sbjct: 160 VKTMIREKNNILFRYYSWLYHGLLVFLPIATHQQWILSMTYLPSLVRAIVCTNREMAPLQ 219
Query: 127 IRPITLHK--LFSLC 89
I + + F++C
Sbjct: 220 IGKVEILNTIFFTVC 234
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 556,371,672
Number of Sequences: 1657284
Number of extensions: 10101711
Number of successful extensions: 22146
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 21599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22143
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -