Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0140
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    24   0.95 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   1.7  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   2.2  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    23   2.9  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    22   5.1  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    21   6.7  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    21   6.7  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    21   6.7  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   6.7  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    21   8.9  

>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 24.2 bits (50), Expect = 0.95
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +2

Query: 383 LTGLLPAVLPNVCVKCTDADK 445
           L  +LP  L   C KCTD  K
Sbjct: 62  LKRVLPDALKTSCAKCTDKQK 82


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = -1

Query: 614 LTSVMCLLFRLSIKCDTSGPRYPCKSLHWIQLS 516
           +T V C LF+ ++   +   R+    L W+ L+
Sbjct: 397 VTKVTCELFQATLSSSSDTNRFGTSGLAWLYLN 429


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
 Frame = +2

Query: 341 HEACDLGRGMA---ALALTGLLPAVLPNVCVKCTDADK 445
           + AC L +G      + L  +LP  L   C KCT+  +
Sbjct: 43  YAACLLSKGPCPPQGVDLKRVLPEALQTNCAKCTEKQR 80


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +2

Query: 395 LPAVLPNVCVKCTDADK 445
           +P  L N C KC D  K
Sbjct: 62  IPDALKNECAKCNDKHK 78


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 3/35 (8%)
 Frame = +2

Query: 350 CDLGRGMAALALTGL---LPAVLPNVCVKCTDADK 445
           C LG+G        L   +P  L N C KC +  K
Sbjct: 46  CILGKGKCTPEGEELKRDIPEALQNECAKCNEKHK 80


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
 Frame = +2

Query: 350 CDLGRGMA---ALALTGLLPAVLPNVCVKCTDADK 445
           C + RG     A  L  +LP  L + C KC++  K
Sbjct: 44  CIMDRGACTPDADELKRVLPDALKSDCAKCSEKQK 78


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 3/35 (8%)
 Frame = +2

Query: 350 CDLGRGMAALALTGL---LPAVLPNVCVKCTDADK 445
           C LG+G        L   +P  L N C KC +  K
Sbjct: 46  CVLGKGKCTPEGEELKKDIPEALQNGCAKCNEKHK 80


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 3/35 (8%)
 Frame = +2

Query: 350 CDLGRGMAALALTGL---LPAVLPNVCVKCTDADK 445
           C LG+G        L   +P  L N C KC +  K
Sbjct: 46  CVLGKGKCTPEGEELKKDIPEALQNGCAKCNEKHK 80


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 535 KDLQGYRGPLVSHL 576
           KDLQG   P+ +HL
Sbjct: 180 KDLQGISAPVEAHL 193


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +2

Query: 395 LPAVLPNVCVKCTDADK 445
           +P  L N C KC +  K
Sbjct: 63  IPDALQNECAKCNEKHK 79


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,615
Number of Sequences: 336
Number of extensions: 2795
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)