Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0136
(668 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 177 7e-45
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 177 9e-45
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 177 9e-45
SB_56| Best HMM Match : Actin (HMM E-Value=0) 177 9e-45
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 176 1e-44
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 175 4e-44
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 154 7e-38
SB_54| Best HMM Match : Actin (HMM E-Value=0) 97 9e-21
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 4e-15
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 59 3e-09
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 54 1e-07
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 52 4e-07
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.49
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 31 1.1
SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19) 29 3.4
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_27551| Best HMM Match : rve (HMM E-Value=6.3e-25) 28 6.0
SB_612| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_40578| Best HMM Match : Pkinase (HMM E-Value=2.2e-11) 28 7.9
SB_20812| Best HMM Match : rve (HMM E-Value=1.2e-25) 28 7.9
SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0) 28 7.9
SB_58386| Best HMM Match : rve (HMM E-Value=8.6e-26) 28 7.9
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 28 7.9
SB_33253| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 177 bits (431), Expect = 7e-45
Identities = 81/85 (95%), Positives = 85/85 (100%)
Frame = +3
Query: 255 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 434
KDLYANTV+SGGTTMYPG+ADRMQKEI+ALAPSTMKIKIIAPPERKYSVWIGGSILASLS
Sbjct: 265 KDLYANTVMSGGTTMYPGLADRMQKEISALAPSTMKIKIIAPPERKYSVWIGGSILASLS 324
Query: 435 TFQQMWISKQEYDESGPSIVHRKCF 509
TFQQMWISKQEYDESGP+IVHRKCF
Sbjct: 325 TFQQMWISKQEYDESGPAIVHRKCF 349
Score = 155 bits (377), Expect = 2e-38
Identities = 72/81 (88%), Positives = 75/81 (92%)
Frame = +1
Query: 16 DIKEXLCYVFLDFEQEMATXASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 195
DIKE LCYV LDFEQEM T ASSSS+EKSYELPDGQVITIGNERFRCPEAL QPSFLGME
Sbjct: 185 DIKEKLCYVALDFEQEMQTAASSSSIEKSYELPDGQVITIGNERFRCPEALLQPSFLGME 244
Query: 196 ACGIHETTYNSIMKCDVDIRR 258
+ GIHETTYNSIMKCDVDIR+
Sbjct: 245 SSGIHETTYNSIMKCDVDIRK 265
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 177 bits (430), Expect = 9e-45
Identities = 82/85 (96%), Positives = 84/85 (98%)
Frame = +3
Query: 255 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 434
KDLYANTVLSGGTTMYPGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSILASLS
Sbjct: 254 KDLYANTVLSGGTTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLS 313
Query: 435 TFQQMWISKQEYDESGPSIVHRKCF 509
TFQQMWISKQEYDESGP+IVHRKCF
Sbjct: 314 TFQQMWISKQEYDESGPAIVHRKCF 338
Score = 158 bits (384), Expect = 3e-39
Identities = 73/81 (90%), Positives = 76/81 (93%)
Frame = +1
Query: 16 DIKEXLCYVFLDFEQEMATXASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 195
DIKE LCYV LDFEQEM T ASSSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME
Sbjct: 174 DIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGME 233
Query: 196 ACGIHETTYNSIMKCDVDIRR 258
+ GIHETTYNSIMKCDVDIR+
Sbjct: 234 SAGIHETTYNSIMKCDVDIRK 254
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 177 bits (430), Expect = 9e-45
Identities = 82/85 (96%), Positives = 84/85 (98%)
Frame = +3
Query: 255 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 434
KDLYANTVLSGG+TMYPGIADRMQKEIT+LAP TMKIKIIAPPERKYSVWIGGSILASLS
Sbjct: 292 KDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLS 351
Query: 435 TFQQMWISKQEYDESGPSIVHRKCF 509
TFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 352 TFQQMWISKQEYDESGPSIVHRKCF 376
Score = 158 bits (384), Expect = 3e-39
Identities = 73/81 (90%), Positives = 76/81 (93%)
Frame = +1
Query: 16 DIKEXLCYVFLDFEQEMATXASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 195
DIKE LCYV LDFEQEM T ASSSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME
Sbjct: 212 DIKEKLCYVALDFEQEMETAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGME 271
Query: 196 ACGIHETTYNSIMKCDVDIRR 258
+ GIHETTYNSIMKCDVDIR+
Sbjct: 272 SAGIHETTYNSIMKCDVDIRK 292
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 177 bits (430), Expect = 9e-45
Identities = 82/85 (96%), Positives = 84/85 (98%)
Frame = +3
Query: 255 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 434
KDLYANTVLSGG+TMYPGIADRMQKEIT+LAP TMKIKIIAPPERKYSVWIGGSILASLS
Sbjct: 291 KDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLS 350
Query: 435 TFQQMWISKQEYDESGPSIVHRKCF 509
TFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 351 TFQQMWISKQEYDESGPSIVHRKCF 375
Score = 158 bits (384), Expect = 3e-39
Identities = 73/81 (90%), Positives = 76/81 (93%)
Frame = +1
Query: 16 DIKEXLCYVFLDFEQEMATXASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 195
DIKE LCYV LDFEQEM T ASSSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME
Sbjct: 211 DIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGME 270
Query: 196 ACGIHETTYNSIMKCDVDIRR 258
+ GIHETTYNSIMKCDVDIR+
Sbjct: 271 SAGIHETTYNSIMKCDVDIRK 291
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 176 bits (429), Expect = 1e-44
Identities = 82/85 (96%), Positives = 84/85 (98%)
Frame = +3
Query: 255 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 434
KDLYANTVLSGG+TMYPGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSILASLS
Sbjct: 292 KDLYANTVLSGGSTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLS 351
Query: 435 TFQQMWISKQEYDESGPSIVHRKCF 509
TFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 352 TFQQMWISKQEYDESGPSIVHRKCF 376
Score = 159 bits (385), Expect = 2e-39
Identities = 73/81 (90%), Positives = 76/81 (93%)
Frame = +1
Query: 16 DIKEXLCYVFLDFEQEMATXASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 195
DIKE LCYV LDFEQEM T ASSSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME
Sbjct: 212 DIKEKLCYVALDFEQEMTTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGME 271
Query: 196 ACGIHETTYNSIMKCDVDIRR 258
+ GIHETTYNSIMKCDVDIR+
Sbjct: 272 SAGIHETTYNSIMKCDVDIRK 292
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 175 bits (425), Expect = 4e-44
Identities = 81/85 (95%), Positives = 84/85 (98%)
Frame = +3
Query: 255 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 434
KDLYANTVLSGG+TM+PGIADRMQKEI+ALAP TMKIKIIAPPERKYSVWIGGSILASLS
Sbjct: 291 KDLYANTVLSGGSTMFPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLS 350
Query: 435 TFQQMWISKQEYDESGPSIVHRKCF 509
TFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 351 TFQQMWISKQEYDESGPSIVHRKCF 375
Score = 155 bits (377), Expect = 2e-38
Identities = 72/81 (88%), Positives = 76/81 (93%)
Frame = +1
Query: 16 DIKEXLCYVFLDFEQEMATXASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 195
DIKE L YV LDFEQEMAT A+SSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLGME
Sbjct: 211 DIKEKLAYVALDFEQEMATAAASSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGME 270
Query: 196 ACGIHETTYNSIMKCDVDIRR 258
+ GIHETTYNSIMKCDVDIR+
Sbjct: 271 SAGIHETTYNSIMKCDVDIRK 291
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 154 bits (373), Expect = 7e-38
Identities = 69/85 (81%), Positives = 78/85 (91%)
Frame = +3
Query: 255 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 434
KDLY+N VLSGG+TM+PGIADRMQKEI LA ++MK+K+IAPPERKYSVWIGGSILASLS
Sbjct: 65 KDLYSNCVLSGGSTMFPGIADRMQKEIAMLANASMKVKVIAPPERKYSVWIGGSILASLS 124
Query: 435 TFQQMWISKQEYDESGPSIVHRKCF 509
TFQQMWI+K+EY E GP IVHRKCF
Sbjct: 125 TFQQMWIAKEEYHEYGPPIVHRKCF 149
Score = 110 bits (265), Expect = 9e-25
Identities = 50/65 (76%), Positives = 56/65 (86%)
Frame = +1
Query: 64 MATXASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCD 243
M A+S LEK+YELPDGQVI+IGNERFRCPEA+FQP+FLGMEA GIHE YN IMKCD
Sbjct: 1 MDIDANSPILEKTYELPDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCIMKCD 60
Query: 244 VDIRR 258
VDIR+
Sbjct: 61 VDIRK 65
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 97.5 bits (232), Expect = 9e-21
Identities = 43/80 (53%), Positives = 55/80 (68%)
Frame = +1
Query: 16 DIKEXLCYVFLDFEQEMATXASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 195
D+KE LCY +D+E+E+ +S E Y LPDGQ I IG+ERFR E LFQPS LG +
Sbjct: 2256 DLKETLCYCAMDYERELKEAETSDDCEAPYMLPDGQSIRIGSERFRAAEPLFQPSLLGRD 2315
Query: 196 ACGIHETTYNSIMKCDVDIR 255
GIHE+ + SI KCD+D+R
Sbjct: 2316 IDGIHESIFKSIKKCDIDLR 2335
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 78.6 bits (185), Expect = 4e-15
Identities = 34/79 (43%), Positives = 48/79 (60%)
Frame = +1
Query: 19 IKEXLCYVFLDFEQEMATXASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEA 198
+KE LCYV + EQE ++ L + Y LPDG+V+ + ERF PEALFQP + +E
Sbjct: 216 MKEKLCYVGYNIEQEQKLALETTVLVEQYTLPDGRVVKLSGERFEAPEALFQPHLINVEG 275
Query: 199 CGIHETTYNSIMKCDVDIR 255
G+ E +N+I D+D R
Sbjct: 276 VGVAELLFNTIQAADIDTR 294
Score = 49.2 bits (112), Expect = 3e-06
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Frame = +3
Query: 177 LVLGYGSLRHPRDNI*LHHEVRRGHPKDLYANTVLSGGTTMYPGIADRMQKEITA-LAPS 353
+VL GS +P L E+ K LY VL G T+ Q +TA
Sbjct: 301 IVLSGGSTMYPGLPSRLEREI-----KQLYLERVLKGDTSKLSSGMGMEQIPLTADYLLQ 355
Query: 354 TMKIKIIAPPERKYSVWIGGSILAS-LSTFQQMWISKQEYDESG 482
KI+I PP RK+ V++GG++LA + W++++EY+E G
Sbjct: 356 KFKIRIEDPPRRKHMVFMGGAVLADIMKDKDSFWMTRKEYEEKG 399
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 59.3 bits (137), Expect = 3e-09
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 16/101 (15%)
Frame = +3
Query: 255 KDLYANTVLSGGTTMYPGIADRMQKEITA----------------LAPSTMKIKIIAPPE 386
+ LY N VLSGG+TM+ R+Q++I + P ++ ++I+
Sbjct: 240 RPLYKNIVLSGGSTMFRDFGRRLQRDIKRTVDARLKMSETLSGGRIKPKPIETQVISHHM 299
Query: 387 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 509
++Y+VW GGS+LAS F + +K +YDE GPSI F
Sbjct: 300 QRYAVWFGGSMLASTPEFYSVCHTKADYDEHGPSICRHNPF 340
Score = 32.3 bits (70), Expect = 0.37
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Frame = +1
Query: 43 FLDFEQEMATXASS-SSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME-ACGIHET 216
F +EQE A S+ + P + + ERF PE F P F + + E
Sbjct: 169 FAKYEQEPAKWIKKYESINAVTKKPFS--VDVAYERFLGPEIFFHPEFSNPDFTTPLSEV 226
Query: 217 TYNSIMKCDVDIRR 258
N I C +D+RR
Sbjct: 227 VDNVIQNCPIDVRR 240
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 53.6 bits (123), Expect = 1e-07
Identities = 22/60 (36%), Positives = 42/60 (70%), Gaps = 3/60 (5%)
Frame = +3
Query: 261 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIA---PPERKYSVWIGGSILASL 431
L+ + +++GG T+ G +R+ +E+ + P +M++K+I+ E++++ WIGGSILASL
Sbjct: 171 LFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRLKLISNNSSVEKRFNPWIGGSILASL 230
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/57 (43%), Positives = 34/57 (59%)
Frame = +1
Query: 16 DIKEXLCYVFLDFEQEMATXASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 186
DIKE +CY+ D +E+ ++ L K Y LPDGQ+I+IG E E LF+P L
Sbjct: 842 DIKEKICYLSKDHLKEVHNYKTNEGLTKFYTLPDGQMISIGYECISSMEPLFRPDLL 898
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 41.1 bits (92), Expect = 8e-04
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 9/83 (10%)
Frame = +3
Query: 255 KDLYANTVLSGGTTMYPGIADRMQKEITALAPS--------TMKIKIIAPP-ERKYSVWI 407
K L N VL GGT M PG R+ +EI L S +K+ PP + W+
Sbjct: 75 KTLAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDKLFIKTVKMHQPPVNANITAWL 134
Query: 408 GGSILASLSTFQQMWISKQEYDE 476
GG+I SL +++ Y +
Sbjct: 135 GGAIFGSLEVLADRSTTRERYQQ 157
>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 31.9 bits (69), Expect = 0.49
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1
Query: 157 PEALFQPSFLGMEACGIHET 216
PE +FQPS LG+E GI ET
Sbjct: 3 PEIIFQPSMLGLEQAGITET 22
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +1
Query: 16 DIKEXLCYVFLDFEQEM 66
DIKE LCYV LDF QE+
Sbjct: 90 DIKEKLCYVALDFYQEI 106
>SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19)
Length = 158
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 125 SSPSETKDSVAQRLSSNPRSWVWK 196
S+ SETK SV +R + + W+W+
Sbjct: 96 STKSETKASVVERFNRTSKEWMWR 119
>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 270 NTVLSGGTTMYPGIADRMQKEITALAP 350
N ++GG TMY R+++E+ A+ P
Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRP 158
>SB_27551| Best HMM Match : rve (HMM E-Value=6.3e-25)
Length = 291
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +2
Query: 125 SSPSETKDSVAQRLSSNPRSWVWK--LAASTRQHITP 229
S+ SE K SV +R + ++W+W+ TR+++ P
Sbjct: 226 STQSELKASVVERFNRTLKTWMWRWFTHKETRRYVLP 262
>SB_612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -1
Query: 524 TRGAFKALPVYNGGARLVVLLFRDPHLLEGREGG 423
+RG++ +P Y+GGA + +L PH LEG G
Sbjct: 400 SRGSYTYIPRYSGGADIDILASPLPH-LEGEAQG 432
>SB_40578| Best HMM Match : Pkinase (HMM E-Value=2.2e-11)
Length = 385
Score = 27.9 bits (59), Expect = 7.9
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +2
Query: 62 RWPPXHPAAPSRSLTN--FPTVRSSPSETKDSVAQRLSSNPRSWVWKLAASTRQHITPS* 235
R P H A SR+ ++ PT+ S+P E V L NP+S + A+T ++ +
Sbjct: 209 RNPFSHGGAESRTYSDKELPTIDSAPPELARLVKLLLRRNPQSRLSADHAATALYVYLNA 268
Query: 236 SATWTSEGLVRQH 274
+ W + L+ H
Sbjct: 269 PSWWWCDTLLVTH 281
>SB_20812| Best HMM Match : rve (HMM E-Value=1.2e-25)
Length = 1097
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 125 SSPSETKDSVAQRLSSNPRSWVWK 196
S+ SETK SV +R + + W+W+
Sbjct: 457 STKSETKASVVERFNRTFKGWMWR 480
>SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0)
Length = 1066
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 436 PSNKCGSRNKSTTSLAPPLYTGSALNAPR 522
P N+ G++ + +L P++TGS L R
Sbjct: 879 PGNQAGNKTRPLRALRSPIHTGSTLEVDR 907
>SB_58386| Best HMM Match : rve (HMM E-Value=8.6e-26)
Length = 212
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 125 SSPSETKDSVAQRLSSNPRSWVWK 196
S+ SETK SV +R + + W+W+
Sbjct: 93 STKSETKASVVERFNRTFKGWMWR 116
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 47 LTSSRRWPPXHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNP 178
L S R P PA PSR L+NF + + T+ + + ++NP
Sbjct: 1056 LKSRRAMDPKDPATPSRKLSNFIPIITRDKPTR-PLPVKSNNNP 1098
>SB_33253| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 125 SSPSETKDSVAQRLSSNPRSWVWK 196
S+ SETK SV +R + + W+W+
Sbjct: 439 STKSETKASVVERFNRTFKGWMWR 462
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,168,511
Number of Sequences: 59808
Number of extensions: 483194
Number of successful extensions: 1676
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1662
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1729817375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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