Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0136
         (668 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.         182   1e-47
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.         182   1e-47
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.         182   1e-47
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.          169   5e-44
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    25   2.2  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  182 bits (442), Expect = 1e-47
 Identities = 85/85 (100%), Positives = 85/85 (100%)
 Frame = +3

Query: 255 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 434
           KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS
Sbjct: 292 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 351

Query: 435 TFQQMWISKQEYDESGPSIVHRKCF 509
           TFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 352 TFQQMWISKQEYDESGPSIVHRKCF 376



 Score =  166 bits (403), Expect = 6e-43
 Identities = 77/81 (95%), Positives = 78/81 (96%)
 Frame = +1

Query: 16  DIKEXLCYVFLDFEQEMATXASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 195
           DIKE LCYV LDFEQEMAT ASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME
Sbjct: 212 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 271

Query: 196 ACGIHETTYNSIMKCDVDIRR 258
           ACGIHETTYNSIMKCDVDIR+
Sbjct: 272 ACGIHETTYNSIMKCDVDIRK 292


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  182 bits (442), Expect = 1e-47
 Identities = 85/85 (100%), Positives = 85/85 (100%)
 Frame = +3

Query: 255 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 434
           KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS
Sbjct: 292 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 351

Query: 435 TFQQMWISKQEYDESGPSIVHRKCF 509
           TFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 352 TFQQMWISKQEYDESGPSIVHRKCF 376



 Score =  166 bits (403), Expect = 6e-43
 Identities = 77/81 (95%), Positives = 78/81 (96%)
 Frame = +1

Query: 16  DIKEXLCYVFLDFEQEMATXASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 195
           DIKE LCYV LDFEQEMAT ASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME
Sbjct: 212 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 271

Query: 196 ACGIHETTYNSIMKCDVDIRR 258
           ACGIHETTYNSIMKCDVDIR+
Sbjct: 272 ACGIHETTYNSIMKCDVDIRK 292


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  182 bits (442), Expect = 1e-47
 Identities = 85/85 (100%), Positives = 85/85 (100%)
 Frame = +3

Query: 255 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 434
           KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS
Sbjct: 292 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 351

Query: 435 TFQQMWISKQEYDESGPSIVHRKCF 509
           TFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 352 TFQQMWISKQEYDESGPSIVHRKCF 376



 Score =  166 bits (403), Expect = 6e-43
 Identities = 77/81 (95%), Positives = 78/81 (96%)
 Frame = +1

Query: 16  DIKEXLCYVFLDFEQEMATXASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 195
           DIKE LCYV LDFEQEMAT ASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME
Sbjct: 212 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 271

Query: 196 ACGIHETTYNSIMKCDVDIRR 258
           ACGIHETTYNSIMKCDVDIR+
Sbjct: 272 ACGIHETTYNSIMKCDVDIRK 292


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score =  169 bits (412), Expect = 5e-44
 Identities = 78/85 (91%), Positives = 81/85 (95%)
 Frame = +3

Query: 255 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 434
           KDLYAN+VLSGGTTMYPGIADRMQKEIT+LAPST+KIKIIAPPERKYSVWIGGSILASLS
Sbjct: 292 KDLYANSVLSGGTTMYPGIADRMQKEITSLAPSTIKIKIIAPPERKYSVWIGGSILASLS 351

Query: 435 TFQQMWISKQEYDESGPSIVHRKCF 509
           TFQ MWISK EYDE GP IVHRKCF
Sbjct: 352 TFQTMWISKHEYDEGGPGIVHRKCF 376



 Score =  146 bits (354), Expect = 6e-37
 Identities = 68/81 (83%), Positives = 72/81 (88%)
 Frame = +1

Query: 16  DIKEXLCYVFLDFEQEMATXASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 195
           DIKE LCYV LDFEQEM   A+SSS EKSYELPDGQVITIGNERFR PEALFQPSFLGME
Sbjct: 212 DIKEKLCYVALDFEQEMQAAAASSSSEKSYELPDGQVITIGNERFRAPEALFQPSFLGME 271

Query: 196 ACGIHETTYNSIMKCDVDIRR 258
           + GIHET YNSIM+CDVDIR+
Sbjct: 272 STGIHETVYNSIMRCDVDIRK 292


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 14/51 (27%), Positives = 27/51 (52%)
 Frame = -2

Query: 367  FIFIVDGARAVISFCIRSAIPGYMVVPPDNTVLAYKSFGCPRRTS*WSYML 215
            F+   D  + +++F  + ++ GY     D +VLA  S+GC  R   + Y++
Sbjct: 1568 FLVEADTGQVLLNFFPQKSMRGYF----DFSVLANDSYGCHDRAHVFIYLI 1614


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 695,837
Number of Sequences: 2352
Number of extensions: 14693
Number of successful extensions: 51
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)