Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0130
         (674 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC095419-1|AAH95419.1|  946|Homo sapiens sorting nexin 14 protein.     30   6.5  
BC068589-1|AAH68589.1|  946|Homo sapiens sorting nexin 14 protein.     30   6.5  
BC046520-1|AAH46520.1|  901|Homo sapiens SNX14 protein protein.        30   6.5  
BC005110-1|AAH05110.2|  893|Homo sapiens sorting nexin 14 protein.     30   6.5  
AY044865-1|AAK97796.1|  886|Homo sapiens sorting nexin 14 protein.     30   6.5  
AL589666-2|CAI40162.1|  886|Homo sapiens RP11-321N4.2 protein.         30   6.5  
AL589666-1|CAI40163.1|  939|Homo sapiens RP11-321N4.2 protein.         30   6.5  
AL136082-2|CAI20444.1|  886|Homo sapiens RP11-321N4.2 protein.         30   6.5  
AL136082-1|CAI20445.1|  939|Homo sapiens RP11-321N4.2 protein.         30   6.5  

>BC095419-1|AAH95419.1|  946|Homo sapiens sorting nexin 14 protein.
          Length = 946

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 13/48 (27%), Positives = 27/48 (56%)
 Frame = +2

Query: 491 QVVIKNKRKIKLHTYISEQKLRVHNHWLMYAVNRSRPRLRYTRKLSKI 634
           +V++K ++K+K   ++ +  L  +   L  A+   R  L Y RKL+++
Sbjct: 203 EVIVKARQKVKNTEFLQQAALEEYGPELHVALRSRRDELHYLRKLTEL 250


>BC068589-1|AAH68589.1|  946|Homo sapiens sorting nexin 14 protein.
          Length = 946

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 13/48 (27%), Positives = 27/48 (56%)
 Frame = +2

Query: 491 QVVIKNKRKIKLHTYISEQKLRVHNHWLMYAVNRSRPRLRYTRKLSKI 634
           +V++K ++K+K   ++ +  L  +   L  A+   R  L Y RKL+++
Sbjct: 203 EVIVKARQKVKNTEFLQQAALEEYGPELHVALRSRRDELHYLRKLTEL 250


>BC046520-1|AAH46520.1|  901|Homo sapiens SNX14 protein protein.
          Length = 901

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 13/48 (27%), Positives = 27/48 (56%)
 Frame = +2

Query: 491 QVVIKNKRKIKLHTYISEQKLRVHNHWLMYAVNRSRPRLRYTRKLSKI 634
           +V++K ++K+K   ++ +  L  +   L  A+   R  L Y RKL+++
Sbjct: 167 EVIVKARQKVKNTEFLQQAALEEYGPELHVALRSRRDELHYLRKLTEL 214


>BC005110-1|AAH05110.2|  893|Homo sapiens sorting nexin 14 protein.
          Length = 893

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 13/48 (27%), Positives = 27/48 (56%)
 Frame = +2

Query: 491 QVVIKNKRKIKLHTYISEQKLRVHNHWLMYAVNRSRPRLRYTRKLSKI 634
           +V++K ++K+K   ++ +  L  +   L  A+   R  L Y RKL+++
Sbjct: 159 EVIVKARQKVKNTEFLQQAALEEYGPELHVALRSRRDELHYLRKLTEL 206


>AY044865-1|AAK97796.1|  886|Homo sapiens sorting nexin 14 protein.
          Length = 886

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 13/48 (27%), Positives = 27/48 (56%)
 Frame = +2

Query: 491 QVVIKNKRKIKLHTYISEQKLRVHNHWLMYAVNRSRPRLRYTRKLSKI 634
           +V++K ++K+K   ++ +  L  +   L  A+   R  L Y RKL+++
Sbjct: 152 EVIVKARQKVKNTEFLQQAALEEYGPELHVALRSRRDELHYLRKLTEL 199


>AL589666-2|CAI40162.1|  886|Homo sapiens RP11-321N4.2 protein.
          Length = 886

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 13/48 (27%), Positives = 27/48 (56%)
 Frame = +2

Query: 491 QVVIKNKRKIKLHTYISEQKLRVHNHWLMYAVNRSRPRLRYTRKLSKI 634
           +V++K ++K+K   ++ +  L  +   L  A+   R  L Y RKL+++
Sbjct: 152 EVIVKARQKVKNTEFLQQAALEEYGPELHVALRSRRDELHYLRKLTEL 199


>AL589666-1|CAI40163.1|  939|Homo sapiens RP11-321N4.2 protein.
          Length = 939

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 13/48 (27%), Positives = 27/48 (56%)
 Frame = +2

Query: 491 QVVIKNKRKIKLHTYISEQKLRVHNHWLMYAVNRSRPRLRYTRKLSKI 634
           +V++K ++K+K   ++ +  L  +   L  A+   R  L Y RKL+++
Sbjct: 196 EVIVKARQKVKNTEFLQQAALEEYGPELHVALRSRRDELHYLRKLTEL 243


>AL136082-2|CAI20444.1|  886|Homo sapiens RP11-321N4.2 protein.
          Length = 886

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 13/48 (27%), Positives = 27/48 (56%)
 Frame = +2

Query: 491 QVVIKNKRKIKLHTYISEQKLRVHNHWLMYAVNRSRPRLRYTRKLSKI 634
           +V++K ++K+K   ++ +  L  +   L  A+   R  L Y RKL+++
Sbjct: 152 EVIVKARQKVKNTEFLQQAALEEYGPELHVALRSRRDELHYLRKLTEL 199


>AL136082-1|CAI20445.1|  939|Homo sapiens RP11-321N4.2 protein.
          Length = 939

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 13/48 (27%), Positives = 27/48 (56%)
 Frame = +2

Query: 491 QVVIKNKRKIKLHTYISEQKLRVHNHWLMYAVNRSRPRLRYTRKLSKI 634
           +V++K ++K+K   ++ +  L  +   L  A+   R  L Y RKL+++
Sbjct: 196 EVIVKARQKVKNTEFLQQAALEEYGPELHVALRSRRDELHYLRKLTEL 243


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,752,256
Number of Sequences: 237096
Number of extensions: 1879950
Number of successful extensions: 12744
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12744
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)