Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0128
         (681 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    23   3.1  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    23   3.1  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    23   3.1  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    22   5.3  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    22   5.3  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   9.3  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   9.3  

>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = +1

Query: 511 DGVIKKFDGEHFHLSRTQCESINHGDRSRXGWQYSRSTRRESSRV 645
           D +I K+   H  + +    S   G     G+QY RST  +  +V
Sbjct: 139 DSLITKWRYNHVLMVQRMIGSSQLGTGGSSGYQYLRSTLSDRYKV 183


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = +1

Query: 511 DGVIKKFDGEHFHLSRTQCESINHGDRSRXGWQYSRSTRRESSRV 645
           D +I K+   H  + +    S   G     G+QY RST  +  +V
Sbjct: 299 DSLITKWRYNHVLMVQRMIGSSQLGTGGSSGYQYLRSTLSDRYKV 343


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = +1

Query: 511 DGVIKKFDGEHFHLSRTQCESINHGDRSRXGWQYSRSTRRESSRV 645
           D +I K+   H  + +    S   G     G+QY RST  +  +V
Sbjct: 299 DSLITKWRYNHVLMVQRMIGSSQLGTGGSSGYQYLRSTLSDRYKV 343


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -2

Query: 566 HCVLDK*KCSP 534
           +C+LD+ KCSP
Sbjct: 46  NCLLDRGKCSP 56


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -2

Query: 566 HCVLDK*KCSP 534
           +C+LD+ KCSP
Sbjct: 46  NCLLDRGKCSP 56


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 517 RHLRSICGPRA 485
           +HL SICG RA
Sbjct: 83  KHLCSICGDRA 93


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +1

Query: 202 WRLLNNN 222
           WRLLNNN
Sbjct: 104 WRLLNNN 110


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,124
Number of Sequences: 336
Number of extensions: 3043
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)