Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0128
(681 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g30210.2 68417.m04297 NADPH-cytochrome p450 reductase, putati... 65 5e-11
At4g30210.1 68417.m04296 NADPH-cytochrome p450 reductase, putati... 65 5e-11
At4g24520.1 68417.m03515 NADPH-cytochrome p450 reductase, putati... 64 8e-11
At3g02280.1 68416.m00209 flavodoxin family protein low similarit... 62 2e-10
At4g05390.1 68417.m00821 ferredoxin--NADP(+) reductase, putative... 35 0.043
At1g30510.3 68414.m03730 ferredoxin--NADP(+) reductase, putative... 35 0.043
At1g30510.2 68414.m03732 ferredoxin--NADP(+) reductase, putative... 35 0.043
At1g30510.1 68414.m03731 ferredoxin--NADP(+) reductase, putative... 35 0.043
At1g60200.1 68414.m06781 splicing factor PWI domain-containing p... 33 0.13
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 32 0.40
At5g66190.1 68418.m08338 ferredoxin--NADP(+) reductase, putative... 30 1.2
At1g30560.1 68414.m03739 transporter, putative similar to glycer... 30 1.6
At5g53870.1 68418.m06701 plastocyanin-like domain-containing pro... 28 6.6
At3g03980.1 68416.m00419 short-chain dehydrogenase/reductase (SD... 27 8.7
>At4g30210.2 68417.m04297 NADPH-cytochrome p450 reductase, putative
/ NADPH-ferrihemoprotein reductase, putative similar to
NADPH-cytochrome P450 oxydoreductase from [Populus
balsamifera subsp. trichocarpa x Populus deltoides]
GI:13183564, GI:13183566
Length = 711
Score = 64.9 bits (151), Expect = 5e-11
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Frame = +1
Query: 40 LFFGCRYKEKDYHCREELEGMVGDGNLS-LYCAFSRDQEDKIYVQHKIFENRETIWRLLN 216
LFFGCR + D+ EEL+ V G L+ L AFSR+ K YVQHK+ + IW +++
Sbjct: 597 LFFGCRNRRMDFIYEEELQRFVESGALAELSVAFSREGPTKEYVQHKMMDKASDIWNMIS 656
Query: 217 NNAHVFISGNAK 252
A++++ G+AK
Sbjct: 657 QGAYLYVCGDAK 668
>At4g30210.1 68417.m04296 NADPH-cytochrome p450 reductase, putative
/ NADPH-ferrihemoprotein reductase, putative similar to
NADPH-cytochrome P450 oxydoreductase from [Populus
balsamifera subsp. trichocarpa x Populus deltoides]
GI:13183564, GI:13183566
Length = 726
Score = 64.9 bits (151), Expect = 5e-11
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Frame = +1
Query: 40 LFFGCRYKEKDYHCREELEGMVGDGNLS-LYCAFSRDQEDKIYVQHKIFENRETIWRLLN 216
LFFGCR + D+ EEL+ V G L+ L AFSR+ K YVQHK+ + IW +++
Sbjct: 597 LFFGCRNRRMDFIYEEELQRFVESGALAELSVAFSREGPTKEYVQHKMMDKASDIWNMIS 656
Query: 217 NNAHVFISGNAK 252
A++++ G+AK
Sbjct: 657 QGAYLYVCGDAK 668
>At4g24520.1 68417.m03515 NADPH-cytochrome p450 reductase, putative
/ NADPH-ferrihemoprotein reductase, putative similar to
NADPH-ferrihemoprotein reductase NADPH-cytochrome P450
oxydoreductase isoform 1 [Populus balsamifera subsp.
trichocarpa x Populus deltoides] GI:13183562, SP|P37116
NADPH-cytochrome P450 reductase (EC 1.6.2.4) (CPR)
[Vigna radiata] {Phaseolus aureus}
Length = 692
Score = 64.1 bits (149), Expect = 8e-11
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +1
Query: 40 LFFGCRYKEKDYHCREELEGMVGDGNLS-LYCAFSRDQEDKIYVQHKIFENRETIWRLLN 216
LFFGCR ++ D+ +EL V G +S L AFSR+ K YVQHK+ E +W L+
Sbjct: 578 LFFGCRNRQMDFIYEDELNNFVDQGVISELIMAFSREGAQKEYVQHKMMEKAAQVWDLIK 637
Query: 217 NNAHVFISGNAK 252
++++ G+AK
Sbjct: 638 EEGYLYVCGDAK 649
>At3g02280.1 68416.m00209 flavodoxin family protein low similarity
to SP|Q05001 NADPH-cytochrome P450 reductase (EC
1.6.2.4) {Catharanthus roseus}, similar to
NADPH-dependent FMN and FAD containing oxidoreductase
[Homo sapiens] GI:6694369; contains Pfam profiles
PF00258: flavodoxin, PF00667: FAD binding domain,
PF00175: Oxidoreductase NAD-binding domain
Length = 623
Score = 62.5 bits (145), Expect = 2e-10
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 7/78 (8%)
Frame = +1
Query: 43 FFGCRYKEKDYHCREELE------GMVGDGNLS-LYCAFSRDQEDKIYVQHKIFENRETI 201
FFGCR K+ D+ R+ E GM+ +G Y AFSRDQ K+YVQHKI E + +
Sbjct: 502 FFGCRNKDTDFLYRDFWESHAREGGMLSEGKGGGFYTAFSRDQPKKVYVQHKIREMSKRV 561
Query: 202 WRLLNNNAHVFISGNAKR 255
W LL + A V+++G++ +
Sbjct: 562 WDLLCDGAAVYVAGSSTK 579
>At4g05390.1 68417.m00821 ferredoxin--NADP(+) reductase, putative /
adrenodoxin reductase, putative strong similarity to
SP|P41345 Ferredoxin--NADP reductase, root isozyme,
chloroplast precursor (EC 1.18.1.2) (FNR) {Oryza
sativa}, ferredoxin-NADP reductase precursor [Zea mays]
GI:500751
Length = 378
Score = 35.1 bits (77), Expect = 0.043
Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 4/41 (9%)
Frame = +1
Query: 133 AFSRDQEDK----IYVQHKIFENRETIWRLLNNNAHVFISG 243
A SR++++K +YVQ KI E + I++LL+N AH++ G
Sbjct: 297 ALSREEKNKKGGKMYVQDKIEEYSDEIFKLLDNGAHIYFCG 337
>At1g30510.3 68414.m03730 ferredoxin--NADP(+) reductase, putative /
adrenodoxin reductase, putative strong similarity to
SP|P41345 Ferredoxin--NADP reductase, root isozyme,
chloroplast precursor (EC 1.18.1.2) (FNR) {Oryza
sativa}, ferredoxin-NADP reductase precursor [Zea mays]
GI:500751
Length = 317
Score = 35.1 bits (77), Expect = 0.043
Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 4/41 (9%)
Frame = +1
Query: 133 AFSRDQEDK----IYVQHKIFENRETIWRLLNNNAHVFISG 243
A SR++++K +YVQ KI E + I++LL+N AH++ G
Sbjct: 236 ALSREEKNKKGGKMYVQDKIEEYSDEIFKLLDNGAHIYFCG 276
>At1g30510.2 68414.m03732 ferredoxin--NADP(+) reductase, putative /
adrenodoxin reductase, putative strong similarity to
SP|P41345 Ferredoxin--NADP reductase, root isozyme,
chloroplast precursor (EC 1.18.1.2) (FNR) {Oryza
sativa}, ferredoxin-NADP reductase precursor [Zea mays]
GI:500751
Length = 382
Score = 35.1 bits (77), Expect = 0.043
Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 4/41 (9%)
Frame = +1
Query: 133 AFSRDQEDK----IYVQHKIFENRETIWRLLNNNAHVFISG 243
A SR++++K +YVQ KI E + I++LL+N AH++ G
Sbjct: 301 ALSREEKNKKGGKMYVQDKIEEYSDEIFKLLDNGAHIYFCG 341
>At1g30510.1 68414.m03731 ferredoxin--NADP(+) reductase, putative /
adrenodoxin reductase, putative strong similarity to
SP|P41345 Ferredoxin--NADP reductase, root isozyme,
chloroplast precursor (EC 1.18.1.2) (FNR) {Oryza
sativa}, ferredoxin-NADP reductase precursor [Zea mays]
GI:500751
Length = 381
Score = 35.1 bits (77), Expect = 0.043
Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 4/41 (9%)
Frame = +1
Query: 133 AFSRDQEDK----IYVQHKIFENRETIWRLLNNNAHVFISG 243
A SR++++K +YVQ KI E + I++LL+N AH++ G
Sbjct: 300 ALSREEKNKKGGKMYVQDKIEEYSDEIFKLLDNGAHIYFCG 340
>At1g60200.1 68414.m06781 splicing factor PWI domain-containing
protein / RNA recognition motif (RRM)-containing protein
contains Pfam profiles PF01480: PWI domain, PF00076: RNA
recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Length = 899
Score = 33.5 bits (73), Expect = 0.13
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +3
Query: 159 DLRPAQDIREPRDDLATAEQQRPRVHIRQRQEMPDNVREALADVIRVCSGTSAAASSDAV 338
D R + +RE DDLA ++ V +R N+++ D +R+ SG AA S+ V
Sbjct: 536 DERRRRQLREKEDDLADRLKEEEEVAEAKRSAEEQNLQQQQLDALRILSG-QAAIGSETV 594
Query: 339 RS 344
++
Sbjct: 595 QT 596
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400);
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]
Length = 837
Score = 31.9 bits (69), Expect = 0.40
Identities = 27/94 (28%), Positives = 45/94 (47%)
Frame = +3
Query: 144 RPGR*DLRPAQDIREPRDDLATAEQQRPRVHIRQRQEMPDNVREALADVIRVCSGTSAAA 323
RP DL ++ I EPRD+L E++ + +R R E +++ E L +I+ SA
Sbjct: 285 RPSMSDLLQSEFITEPRDNL---EEREAAIELRDRIEEQESLLEFLL-LIQQRKQESAYR 340
Query: 324 SSDAVRSLQEQGRLQVETW*CLALQMGSIADFTR 425
D V L V+ L + S++DF++
Sbjct: 341 LQDTVSLLSSDIEQVVKRQLILKKRGSSLSDFSK 374
>At5g66190.1 68418.m08338 ferredoxin--NADP(+) reductase, putative /
adrenodoxin reductase, putative strong similarity to
Ferredoxin--NADP reductase, chloroplast precursor (EC
1.18.1.2) (FNR) from {Pisum sativum} SP|P10933,
{Mesembryanthemum crystallinum} SP|P41343, {Spinacia
oleracea} SP|P00455; identical to cDNA ferredoxin-NADP+
reductase precursor (petH) GI:5730138
Length = 360
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Frame = +1
Query: 82 REELEGMV--GDGNLSLYCAFSRDQE----DKIYVQHKIFENRETIWRLL-NNNAHVFIS 240
+EE E M N L A SR+Q +K+Y+Q ++ E E +W LL +N V++
Sbjct: 259 KEEFEKMKEKNPDNFRLDFAVSREQTNEKGEKMYIQTRMAEYAEELWELLKKDNTFVYMC 318
Query: 241 G 243
G
Sbjct: 319 G 319
>At1g30560.1 68414.m03739 transporter, putative similar to
glycerol-3-phosphate transporter (glycerol 3-phosphate
permease) [Homo sapiens] GI:7543982
Length = 510
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 352 SKVDSRSRPGDAWHSRWVASRTSQGYQRR 438
S+VDS R GD +++SRTS G+ RR
Sbjct: 249 SEVDSTMRLGDTITESFLSSRTSTGFDRR 277
>At5g53870.1 68418.m06701 plastocyanin-like domain-containing
protein contains similarity to SP|Q02917 Early nodulin
55-2 precursor {Glycine max}; PF02298: Plastocyanin-like
domain
Length = 370
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 175 KIFENRETIWRLLNNNAHVFISGNAKRCR 261
K FEN E++ L + A FISGN C+
Sbjct: 90 KNFENGESVVTLDRSGAFYFISGNQDHCQ 118
>At3g03980.1 68416.m00419 short-chain dehydrogenase/reductase (SDR)
family protein similar to short-chain type
dehydrogenase/reductase SP:Q08632 [Picea abies]
Length = 270
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 42 FLRVSVQREGLPLQGRVGGDGGRW 113
F RV ++ +PL G + GDGG W
Sbjct: 234 FGRVGEAKDVVPLVGFLAGDGGEW 257
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,418,421
Number of Sequences: 28952
Number of extensions: 284163
Number of successful extensions: 780
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1438152744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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