Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0125
         (659 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor prot...    25   1.6  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    25   2.8  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   6.5  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   8.5  
AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein prot...    23   8.5  

>DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor
           protein.
          Length = 344

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 21/68 (30%), Positives = 27/68 (39%)
 Frame = +2

Query: 77  YYIWRKRKKARIYYNNITFVVSEYSGLQKCMDGTVVTKTRLNLHTISAICY*QSITTMCC 256
           Y+IW K      Y    TF V      +   + TV+T T   +    AIC+     TM  
Sbjct: 104 YFIWSKYP----YVFGETFCVLRGIAAEMSANATVLTITAFTIERYFAICHPFLSHTMSK 159

Query: 257 PSSKSRFI 280
            S   RFI
Sbjct: 160 LSRAVRFI 167


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 1344

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +2

Query: 122 NITFVVSEYSGLQKCMDGTVVTKTRLNLHTISAIC 226
           ++ +   E  GL+ C D     K R  LH +SA C
Sbjct: 541 DVVYETQEPCGLELCPDNRAALKER--LHALSARC 573


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -2

Query: 286 CDYETALARRATHCSNALLITDGADC 209
           C   TAL  + T     +  TDG DC
Sbjct: 291 CTTSTALDGQRTRVCKCMHFTDGPDC 316


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 63   ISIINIIFGEREKKHEFITITLRS 134
            +SI+     ER K  +FI I+LRS
Sbjct: 1226 VSIVAHYIKERTKNAQFIIISLRS 1249


>AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein
           protein.
          Length = 385

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 6/11 (54%), Positives = 11/11 (100%)
 Frame = +1

Query: 526 TDYCPVPLQVI 558
           ++YCP+PL+V+
Sbjct: 31  SNYCPIPLEVL 41


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 566,650
Number of Sequences: 2352
Number of extensions: 9146
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)