Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0125
         (659 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118675-1|AAM50535.1| 1073|Drosophila melanogaster AT05180p pro...    32   0.60 
AE014297-1565|AAF54847.1| 1059|Drosophila melanogaster CG14395-P...    32   0.60 
AY061309-1|AAL28857.1|  940|Drosophila melanogaster LD22446p pro...    29   4.2  
AE014134-1636|AAF52774.1|  940|Drosophila melanogaster CG3766-PA...    29   4.2  

>AY118675-1|AAM50535.1| 1073|Drosophila melanogaster AT05180p
           protein.
          Length = 1073

 Score = 32.3 bits (70), Expect = 0.60
 Identities = 37/104 (35%), Positives = 54/104 (51%)
 Frame = +2

Query: 182 VTKTRLNLHTISAICY*QSITTMCCPSSKSRFIVTTQ*VSRRILSGVAIPILIQRSTALA 361
           + K+  +   I+A  Y QS+  M   SS SR   +TQ  + R  +GV+  I I  S+ALA
Sbjct: 320 ICKSTEDAIVIAATLY-QSL--MAHVSSSSRR--STQRRAPRQQNGVSC-ISIASSSALA 373

Query: 362 RTSVSKLSQVEPVSSPTHSKLTGIAS*AISE*VGKKRTVDRSTL 493
            ++    SQ+ P +S   S   G AS A S   G+K+ V  S+L
Sbjct: 374 SSNYLSRSQIVPSASGRRSSFRGSASGAPSR-SGRKKRVSNSSL 416


>AE014297-1565|AAF54847.1| 1059|Drosophila melanogaster CG14395-PA
           protein.
          Length = 1059

 Score = 32.3 bits (70), Expect = 0.60
 Identities = 37/104 (35%), Positives = 54/104 (51%)
 Frame = +2

Query: 182 VTKTRLNLHTISAICY*QSITTMCCPSSKSRFIVTTQ*VSRRILSGVAIPILIQRSTALA 361
           + K+  +   I+A  Y QS+  M   SS SR   +TQ  + R  +GV+  I I  S+ALA
Sbjct: 320 ICKSTEDAIVIAATLY-QSL--MAHVSSSSRR--STQRRAPRQQNGVSC-ISIASSSALA 373

Query: 362 RTSVSKLSQVEPVSSPTHSKLTGIAS*AISE*VGKKRTVDRSTL 493
            ++    SQ+ P +S   S   G AS A S   G+K+ V  S+L
Sbjct: 374 SSNYLSRSQIVPSASGRRSSFRGSASGAPSR-SGRKKRVSNSSL 416


>AY061309-1|AAL28857.1|  940|Drosophila melanogaster LD22446p
           protein.
          Length = 940

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 16/47 (34%), Positives = 26/47 (55%)
 Frame = -2

Query: 217 ADCM*IQTCFCYDCTIHALLQPTVLAHYERNVIVINSCFFSLSPNII 77
           A  M I+  + Y C+ H L  P + +++ RNV+ +  CF S S  +I
Sbjct: 715 ASLMLIRMLYEYGCSAHRL--PLLASYHARNVVDLLRCFNSRSCQLI 759


>AE014134-1636|AAF52774.1|  940|Drosophila melanogaster CG3766-PA
           protein.
          Length = 940

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 16/47 (34%), Positives = 26/47 (55%)
 Frame = -2

Query: 217 ADCM*IQTCFCYDCTIHALLQPTVLAHYERNVIVINSCFFSLSPNII 77
           A  M I+  + Y C+ H L  P + +++ RNV+ +  CF S S  +I
Sbjct: 715 ASLMLIRMLYEYGCSAHRL--PLLASYHARNVVDLLRCFNSRSCQLI 759


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,700,224
Number of Sequences: 53049
Number of extensions: 430984
Number of successful extensions: 1105
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1105
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)