Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0124
         (680 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    28   0.081
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    28   0.081
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    28   0.081
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    28   0.081
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    27   0.14 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    27   0.14 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    27   0.14 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    25   0.76 
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    21   9.3  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   9.3  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 27.9 bits (59), Expect = 0.081
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 611 FCSHQCGGIWQLWILF*PWI 552
           F SHQ   IW LW+L   WI
Sbjct: 458 FISHQHAWIWLLWLLSQTWI 477


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 27.9 bits (59), Expect = 0.081
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 611 FCSHQCGGIWQLWILF*PWI 552
           F SHQ   IW LW+L   WI
Sbjct: 458 FISHQHAWIWLLWLLSQTWI 477


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 27.9 bits (59), Expect = 0.081
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 611 FCSHQCGGIWQLWILF*PWI 552
           F SHQ   IW LW+L   WI
Sbjct: 458 FISHQHAWIWLLWLLSQTWI 477


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 27.9 bits (59), Expect = 0.081
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 611 FCSHQCGGIWQLWILF*PWI 552
           F SHQ   IW LW+L   WI
Sbjct: 458 FISHQHAWIWLLWLLSQTWI 477


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 27.1 bits (57), Expect = 0.14
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -1

Query: 617 QLFCSHQCGGIWQLWILF*PWI 552
           Q F SHQ   IW +W+L   WI
Sbjct: 210 QDFLSHQHAWIWLVWLLSQAWI 231


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 27.1 bits (57), Expect = 0.14
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -1

Query: 617 QLFCSHQCGGIWQLWILF*PWI 552
           Q F SHQ   IW +W+L   WI
Sbjct: 443 QDFLSHQHAWIWLVWLLSQAWI 464


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 27.1 bits (57), Expect = 0.14
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -1

Query: 617 QLFCSHQCGGIWQLWILF*PWI 552
           Q F SHQ   IW +W+L   WI
Sbjct: 443 QDFLSHQHAWIWLVWLLSQAWI 464


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 24.6 bits (51), Expect = 0.76
 Identities = 10/41 (24%), Positives = 25/41 (60%)
 Frame = +3

Query: 57  YKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDV 179
           Y + L +   +++I+ F  +   LN+ LET+  Q++++ ++
Sbjct: 180 YYEFLLISLINILIRSFKSRYKDLNQKLETACEQSKSVEEL 220


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -3

Query: 507 LPDCISASVSSCIETPK 457
           LPD +    S C ET K
Sbjct: 67  LPDALHTECSKCSETQK 83


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 56  LQRFFETKGGAFDN 97
           ++RFF + G AFDN
Sbjct: 171 IKRFFTSLGIAFDN 184


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,734
Number of Sequences: 336
Number of extensions: 3488
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)