Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0124
(680 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR541745-1|CAG46545.1| 254|Homo sapiens PSME3 protein. 183 5e-46
BT019386-1|AAV38193.1| 254|Homo sapiens proteasome (prosome, ma... 183 5e-46
BC008020-1|AAH08020.1| 254|Homo sapiens proteasome (prosome, ma... 183 5e-46
BC002684-1|AAH02684.1| 254|Homo sapiens proteasome (prosome, ma... 183 5e-46
BC001423-1|AAH01423.1| 254|Homo sapiens proteasome (prosome, ma... 183 5e-46
U11292-1|AAB60335.1| 267|Homo sapiens Ki nuclear autoantigen pr... 169 8e-42
CR541658-1|CAG46459.1| 249|Homo sapiens PSME1 protein. 121 2e-27
U10360-1|AAA53230.1| 249|Homo sapiens interferon-gamma protein. 121 3e-27
L07633-1|AAA16521.1| 249|Homo sapiens interferon-gamma protein. 121 3e-27
CR456780-1|CAG33061.1| 249|Homo sapiens PSME1 protein. 121 3e-27
BT019337-1|AAV38144.1| 249|Homo sapiens proteasome (prosome, ma... 121 3e-27
BC007503-1|AAH07503.1| 249|Homo sapiens proteasome (prosome, ma... 121 3e-27
BC000352-1|AAH00352.1| 249|Homo sapiens proteasome (prosome, ma... 121 3e-27
AF078829-1|AAF02217.1| 249|Homo sapiens proteasome activator PA... 121 3e-27
CR541743-1|CAG46543.1| 239|Homo sapiens PSME2 protein. 100 1e-20
D45248-1|BAA08205.1| 239|Homo sapiens proteasome activator hPA2... 97 4e-20
CR541657-1|CAG46458.1| 239|Homo sapiens PSME2 protein. 97 4e-20
BC072025-1|AAH72025.1| 239|Homo sapiens proteasome (prosome, ma... 97 4e-20
BC019885-1|AAH19885.1| 239|Homo sapiens proteasome (prosome, ma... 97 4e-20
BC004368-1|AAH04368.1| 239|Homo sapiens proteasome (prosome, ma... 97 4e-20
AY771595-1|AAX11425.1| 239|Homo sapiens cell migration-inducing... 97 4e-20
AF079558-1|AAF02218.1| 239|Homo sapiens proteasome activator PA... 97 4e-20
U25756-1|AAA93227.1| 54|Homo sapiens Ki nuclear autoantigen pr... 45 3e-04
AB065599-1|BAC05827.1| 388|Homo sapiens seven transmembrane hel... 36 0.13
BC142609-1|AAI42610.1| 658|Homo sapiens MYPN protein protein. 30 8.8
AL834247-1|CAD38923.2| 1391|Homo sapiens hypothetical protein pr... 30 8.8
AL832002-1|CAD89906.1| 1320|Homo sapiens hypothetical protein pr... 30 8.8
AL512429-2|CAH73748.1| 1320|Homo sapiens sarcomeric protein myop... 30 8.8
AK027343-1|BAB55048.1| 507|Homo sapiens .117). protein. 30 8.8
AF328296-1|AAK50625.1| 1320|Homo sapiens myopalladin protein. 30 8.8
>CR541745-1|CAG46545.1| 254|Homo sapiens PSME3 protein.
Length = 254
Score = 183 bits (446), Expect = 5e-46
Identities = 79/130 (60%), Positives = 109/130 (83%)
Frame = +2
Query: 290 EGTRVYVLPNGSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGVS 469
+GT+V+V+PNG + N+ L D+I VKP IR L+E N +KMW+ +IP+IEDGNNFGVS
Sbjct: 97 QGTKVFVMPNGMLKSNQQLVDIIEKVKPEIRLLIEKCNTVKMWVQLLIPRIEDGNNFGVS 156
Query: 470 IQEDTLAEIQSGRSEAAAFFDQISRYFISRAKIVSKVAKYPHIDDYRRAVRELDEKEYLS 649
IQE+T+AE+++ SEAA++ DQISRY+I+RAK+VSK+AKYPH++DYRR V E+DEKEY+S
Sbjct: 157 IQEETVAELRTVESEAASYLDQISRYYITRAKLVSKIAKYPHVEDYRRTVTEIDEKEYIS 216
Query: 650 LWLVMCEIRN 679
L L++ E+RN
Sbjct: 217 LRLIISELRN 226
Score = 46.0 bits (104), Expect = 1e-04
Identities = 17/62 (27%), Positives = 37/62 (59%)
Frame = +3
Query: 45 KVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 224
KV +++ + +AE + FP+K+++L+ L+ +L+ +H D+N+P+P P +
Sbjct: 14 KVDSFRERITSEAEDWVANFFPKKLLELDSFLKEPILNIHDLTQIHSDMNLPVPDPILLT 73
Query: 225 NN 230
N+
Sbjct: 74 NS 75
>BT019386-1|AAV38193.1| 254|Homo sapiens proteasome (prosome,
macropain) activator subunit 3 (PA28 gamma; Ki) protein.
Length = 254
Score = 183 bits (446), Expect = 5e-46
Identities = 79/130 (60%), Positives = 109/130 (83%)
Frame = +2
Query: 290 EGTRVYVLPNGSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGVS 469
+GT+V+V+PNG + N+ L D+I VKP IR L+E N +KMW+ +IP+IEDGNNFGVS
Sbjct: 97 QGTKVFVMPNGMLKSNQQLVDIIEKVKPEIRLLIEKCNTVKMWVQLLIPRIEDGNNFGVS 156
Query: 470 IQEDTLAEIQSGRSEAAAFFDQISRYFISRAKIVSKVAKYPHIDDYRRAVRELDEKEYLS 649
IQE+T+AE+++ SEAA++ DQISRY+I+RAK+VSK+AKYPH++DYRR V E+DEKEY+S
Sbjct: 157 IQEETVAELRTVESEAASYLDQISRYYITRAKLVSKIAKYPHVEDYRRTVTEIDEKEYIS 216
Query: 650 LWLVMCEIRN 679
L L++ E+RN
Sbjct: 217 LRLIISELRN 226
Score = 48.4 bits (110), Expect = 2e-05
Identities = 18/62 (29%), Positives = 38/62 (61%)
Frame = +3
Query: 45 KVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 224
KV +++ + +AE L+ FP+K+++L+ L+ +L+ +H D+N+P+P P +
Sbjct: 14 KVDSFRERITSEAEDLVANFFPKKLLELDSFLKEPILNIHDLTQIHSDMNLPVPDPILLT 73
Query: 225 NN 230
N+
Sbjct: 74 NS 75
>BC008020-1|AAH08020.1| 254|Homo sapiens proteasome (prosome,
macropain) activator subunit 3 (PA28 gamma; Ki) protein.
Length = 254
Score = 183 bits (446), Expect = 5e-46
Identities = 79/130 (60%), Positives = 109/130 (83%)
Frame = +2
Query: 290 EGTRVYVLPNGSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGVS 469
+GT+V+V+PNG + N+ L D+I VKP IR L+E N +KMW+ +IP+IEDGNNFGVS
Sbjct: 97 QGTKVFVMPNGMLKSNQQLVDIIEKVKPEIRLLIEKCNTVKMWVQLLIPRIEDGNNFGVS 156
Query: 470 IQEDTLAEIQSGRSEAAAFFDQISRYFISRAKIVSKVAKYPHIDDYRRAVRELDEKEYLS 649
IQE+T+AE+++ SEAA++ DQISRY+I+RAK+VSK+AKYPH++DYRR V E+DEKEY+S
Sbjct: 157 IQEETVAELRTVESEAASYLDQISRYYITRAKLVSKIAKYPHVEDYRRTVTEIDEKEYIS 216
Query: 650 LWLVMCEIRN 679
L L++ E+RN
Sbjct: 217 LRLIISELRN 226
Score = 48.4 bits (110), Expect = 2e-05
Identities = 18/62 (29%), Positives = 38/62 (61%)
Frame = +3
Query: 45 KVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 224
KV +++ + +AE L+ FP+K+++L+ L+ +L+ +H D+N+P+P P +
Sbjct: 14 KVDSFRERITSEAEDLVANFFPKKLLELDSFLKEPILNIHDLTQIHSDMNLPVPDPILLT 73
Query: 225 NN 230
N+
Sbjct: 74 NS 75
>BC002684-1|AAH02684.1| 254|Homo sapiens proteasome (prosome,
macropain) activator subunit 3 (PA28 gamma; Ki) protein.
Length = 254
Score = 183 bits (446), Expect = 5e-46
Identities = 79/130 (60%), Positives = 109/130 (83%)
Frame = +2
Query: 290 EGTRVYVLPNGSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGVS 469
+GT+V+V+PNG + N+ L D+I VKP IR L+E N +KMW+ +IP+IEDGNNFGVS
Sbjct: 97 QGTKVFVMPNGMLKSNQQLVDIIEKVKPEIRLLIEKCNTVKMWVQLLIPRIEDGNNFGVS 156
Query: 470 IQEDTLAEIQSGRSEAAAFFDQISRYFISRAKIVSKVAKYPHIDDYRRAVRELDEKEYLS 649
IQE+T+AE+++ SEAA++ DQISRY+I+RAK+VSK+AKYPH++DYRR V E+DEKEY+S
Sbjct: 157 IQEETVAELRTVESEAASYLDQISRYYITRAKLVSKIAKYPHVEDYRRTVTEIDEKEYIS 216
Query: 650 LWLVMCEIRN 679
L L++ E+RN
Sbjct: 217 LRLIISELRN 226
Score = 48.4 bits (110), Expect = 2e-05
Identities = 18/62 (29%), Positives = 38/62 (61%)
Frame = +3
Query: 45 KVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 224
KV +++ + +AE L+ FP+K+++L+ L+ +L+ +H D+N+P+P P +
Sbjct: 14 KVDSFRERITSEAEDLVANFFPKKLLELDSFLKEPILNIHDLTQIHSDMNLPVPDPILLT 73
Query: 225 NN 230
N+
Sbjct: 74 NS 75
>BC001423-1|AAH01423.1| 254|Homo sapiens proteasome (prosome,
macropain) activator subunit 3 (PA28 gamma; Ki) protein.
Length = 254
Score = 183 bits (446), Expect = 5e-46
Identities = 79/130 (60%), Positives = 109/130 (83%)
Frame = +2
Query: 290 EGTRVYVLPNGSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGVS 469
+GT+V+V+PNG + N+ L D+I VKP IR L+E N +KMW+ +IP+IEDGNNFGVS
Sbjct: 97 QGTKVFVMPNGMLKSNQQLVDIIEKVKPEIRLLIEKCNTVKMWVQLLIPRIEDGNNFGVS 156
Query: 470 IQEDTLAEIQSGRSEAAAFFDQISRYFISRAKIVSKVAKYPHIDDYRRAVRELDEKEYLS 649
IQE+T+AE+++ SEAA++ DQISRY+I+RAK+VSK+AKYPH++DYRR V E+DEKEY+S
Sbjct: 157 IQEETVAELRTVESEAASYLDQISRYYITRAKLVSKIAKYPHVEDYRRTVTEIDEKEYIS 216
Query: 650 LWLVMCEIRN 679
L L++ E+RN
Sbjct: 217 LRLIISELRN 226
Score = 48.4 bits (110), Expect = 2e-05
Identities = 18/62 (29%), Positives = 38/62 (61%)
Frame = +3
Query: 45 KVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 224
KV +++ + +AE L+ FP+K+++L+ L+ +L+ +H D+N+P+P P +
Sbjct: 14 KVDSFRERITSEAEDLVANFFPKKLLELDSFLKEPILNIHDLTQIHSDMNLPVPDPILLT 73
Query: 225 NN 230
N+
Sbjct: 74 NS 75
>U11292-1|AAB60335.1| 267|Homo sapiens Ki nuclear autoantigen
protein.
Length = 267
Score = 169 bits (411), Expect = 8e-42
Identities = 79/143 (55%), Positives = 109/143 (76%), Gaps = 13/143 (9%)
Frame = +2
Query: 290 EGTRVYVLPNGSVPCNKPLSDLIHLVKPHIRELVEDSNL-------------LKMWISFM 430
+GT+V+V+PNG + N+ L D+I VKP IR L+E N +KMW+ +
Sbjct: 97 QGTKVFVMPNGMLKSNQQLVDIIEKVKPEIRLLIEKCNTPSGKGPHICFDLQVKMWVQLL 156
Query: 431 IPKIEDGNNFGVSIQEDTLAEIQSGRSEAAAFFDQISRYFISRAKIVSKVAKYPHIDDYR 610
IP+IEDGNNFGVSIQE+T+AE+++ SEAA++ DQISRY+I+RAK+VSK+AKYPH++DYR
Sbjct: 157 IPRIEDGNNFGVSIQEETVAELRTVESEAASYLDQISRYYITRAKLVSKIAKYPHVEDYR 216
Query: 611 RAVRELDEKEYLSLWLVMCEIRN 679
R V E+DEKEY+SL L++ E+RN
Sbjct: 217 RTVTEIDEKEYISLRLIISELRN 239
Score = 50.0 bits (114), Expect = 8e-06
Identities = 19/62 (30%), Positives = 38/62 (61%)
Frame = +3
Query: 45 KVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 224
KV +++ + KAE L+ FP+K+++L+ L+ +L+ +H D+N+P+P P +
Sbjct: 14 KVDSFRERITSKAEDLVANFFPKKLLELDSFLKEPILNIHDLTQIHSDMNLPVPDPILLT 73
Query: 225 NN 230
N+
Sbjct: 74 NS 75
>CR541658-1|CAG46459.1| 249|Homo sapiens PSME1 protein.
Length = 249
Score = 121 bits (292), Expect = 2e-27
Identities = 55/122 (45%), Positives = 78/122 (63%)
Frame = +2
Query: 314 PNGSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGVSIQEDTLAE 493
P G V CN+ + L+ +KP I++++E NL+ W+ IP+IEDGNNFGV++QE
Sbjct: 100 PCGPVNCNEKIVVLLQRLKPEIKDVIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFEL 159
Query: 494 IQSGRSEAAAFFDQISRYFISRAKIVSKVAKYPHIDDYRRAVRELDEKEYLSLWLVMCEI 673
+ S ++ F QIS+YF R V+K AK PH+ DYR+ V ELDE EY + L++ EI
Sbjct: 160 MTSLHTKLEGFHSQISKYFSERGDAVTKAAKQPHVGDYRQLVHELDEAEYRDIRLMVMEI 219
Query: 674 RN 679
RN
Sbjct: 220 RN 221
Score = 46.0 bits (104), Expect = 1e-04
Identities = 23/69 (33%), Positives = 37/69 (53%)
Frame = +3
Query: 45 KVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 224
KV +++ L K E+L+ FP+KI +L+ L+ NLS++ L+IP+P P
Sbjct: 13 KVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPVKEK 72
Query: 225 NNEPNAKRQ 251
E K+Q
Sbjct: 73 EKEERKKQQ 81
>U10360-1|AAA53230.1| 249|Homo sapiens interferon-gamma protein.
Length = 249
Score = 121 bits (291), Expect = 3e-27
Identities = 55/122 (45%), Positives = 78/122 (63%)
Frame = +2
Query: 314 PNGSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGVSIQEDTLAE 493
P G V CN+ + L+ +KP I++++E NL+ W+ IP+IEDGNNFGV++QE
Sbjct: 100 PCGPVNCNEKIVVLLQRLKPEIKDVIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFEL 159
Query: 494 IQSGRSEAAAFFDQISRYFISRAKIVSKVAKYPHIDDYRRAVRELDEKEYLSLWLVMCEI 673
+ S ++ F QIS+YF R V+K AK PH+ DYR+ V ELDE EY + L++ EI
Sbjct: 160 MTSLHTKLEGFHTQISKYFSERGDAVTKAAKQPHVGDYRQLVHELDEAEYRDIRLMVMEI 219
Query: 674 RN 679
RN
Sbjct: 220 RN 221
Score = 46.0 bits (104), Expect = 1e-04
Identities = 23/69 (33%), Positives = 37/69 (53%)
Frame = +3
Query: 45 KVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 224
KV +++ L K E+L+ FP+KI +L+ L+ NLS++ L+IP+P P
Sbjct: 13 KVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPVKEK 72
Query: 225 NNEPNAKRQ 251
E K+Q
Sbjct: 73 EKEERKKQQ 81
>L07633-1|AAA16521.1| 249|Homo sapiens interferon-gamma protein.
Length = 249
Score = 121 bits (291), Expect = 3e-27
Identities = 55/122 (45%), Positives = 78/122 (63%)
Frame = +2
Query: 314 PNGSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGVSIQEDTLAE 493
P G V CN+ + L+ +KP I++++E NL+ W+ IP+IEDGNNFGV++QE
Sbjct: 100 PCGPVNCNEKIVVLLQRLKPEIKDVIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFEL 159
Query: 494 IQSGRSEAAAFFDQISRYFISRAKIVSKVAKYPHIDDYRRAVRELDEKEYLSLWLVMCEI 673
+ S ++ F QIS+YF R V+K AK PH+ DYR+ V ELDE EY + L++ EI
Sbjct: 160 MTSLHTKLEGFHTQISKYFSERGDAVTKAAKQPHVGDYRQLVHELDEAEYRDIRLMVMEI 219
Query: 674 RN 679
RN
Sbjct: 220 RN 221
Score = 46.0 bits (104), Expect = 1e-04
Identities = 23/69 (33%), Positives = 37/69 (53%)
Frame = +3
Query: 45 KVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 224
KV +++ L K E+L+ FP+KI +L+ L+ NLS++ L+IP+P P
Sbjct: 13 KVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPVKEK 72
Query: 225 NNEPNAKRQ 251
E K+Q
Sbjct: 73 EKEERKKQQ 81
>CR456780-1|CAG33061.1| 249|Homo sapiens PSME1 protein.
Length = 249
Score = 121 bits (291), Expect = 3e-27
Identities = 55/122 (45%), Positives = 78/122 (63%)
Frame = +2
Query: 314 PNGSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGVSIQEDTLAE 493
P G V CN+ + L+ +KP I++++E NL+ W+ IP+IEDGNNFGV++QE
Sbjct: 100 PCGPVNCNEKIVVLLQRLKPEIKDVIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFEL 159
Query: 494 IQSGRSEAAAFFDQISRYFISRAKIVSKVAKYPHIDDYRRAVRELDEKEYLSLWLVMCEI 673
+ S ++ F QIS+YF R V+K AK PH+ DYR+ V ELDE EY + L++ EI
Sbjct: 160 MTSLHTKLEGFHTQISKYFSERGDAVTKAAKQPHVGDYRQLVHELDEAEYRDIRLMVMEI 219
Query: 674 RN 679
RN
Sbjct: 220 RN 221
Score = 46.0 bits (104), Expect = 1e-04
Identities = 23/69 (33%), Positives = 37/69 (53%)
Frame = +3
Query: 45 KVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 224
KV +++ L K E+L+ FP+KI +L+ L+ NLS++ L+IP+P P
Sbjct: 13 KVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPVKEK 72
Query: 225 NNEPNAKRQ 251
E K+Q
Sbjct: 73 EKEERKKQQ 81
>BT019337-1|AAV38144.1| 249|Homo sapiens proteasome (prosome,
macropain) activator subunit 1 (PA28 alpha) protein.
Length = 249
Score = 121 bits (291), Expect = 3e-27
Identities = 55/122 (45%), Positives = 78/122 (63%)
Frame = +2
Query: 314 PNGSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGVSIQEDTLAE 493
P G V CN+ + L+ +KP I++++E NL+ W+ IP+IEDGNNFGV++QE
Sbjct: 100 PCGPVNCNEKIVVLLQRLKPEIKDVIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFEL 159
Query: 494 IQSGRSEAAAFFDQISRYFISRAKIVSKVAKYPHIDDYRRAVRELDEKEYLSLWLVMCEI 673
+ S ++ F QIS+YF R V+K AK PH+ DYR+ V ELDE EY + L++ EI
Sbjct: 160 MTSLHTKLEGFHTQISKYFSERGDAVTKAAKQPHVGDYRQLVHELDEAEYRDIRLMVMEI 219
Query: 674 RN 679
RN
Sbjct: 220 RN 221
Score = 46.0 bits (104), Expect = 1e-04
Identities = 23/69 (33%), Positives = 37/69 (53%)
Frame = +3
Query: 45 KVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 224
KV +++ L K E+L+ FP+KI +L+ L+ NLS++ L+IP+P P
Sbjct: 13 KVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPVKEK 72
Query: 225 NNEPNAKRQ 251
E K+Q
Sbjct: 73 EKEERKKQQ 81
>BC007503-1|AAH07503.1| 249|Homo sapiens proteasome (prosome,
macropain) activator subunit 1 (PA28 alpha) protein.
Length = 249
Score = 121 bits (291), Expect = 3e-27
Identities = 55/122 (45%), Positives = 78/122 (63%)
Frame = +2
Query: 314 PNGSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGVSIQEDTLAE 493
P G V CN+ + L+ +KP I++++E NL+ W+ IP+IEDGNNFGV++QE
Sbjct: 100 PCGPVNCNEKIVVLLQRLKPEIKDVIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFEL 159
Query: 494 IQSGRSEAAAFFDQISRYFISRAKIVSKVAKYPHIDDYRRAVRELDEKEYLSLWLVMCEI 673
+ S ++ F QIS+YF R V+K AK PH+ DYR+ V ELDE EY + L++ EI
Sbjct: 160 MTSLHTKLEGFHTQISKYFSERGDAVTKAAKQPHVGDYRQLVHELDEAEYRDIRLMVMEI 219
Query: 674 RN 679
RN
Sbjct: 220 RN 221
Score = 46.0 bits (104), Expect = 1e-04
Identities = 23/69 (33%), Positives = 37/69 (53%)
Frame = +3
Query: 45 KVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 224
KV +++ L K E+L+ FP+KI +L+ L+ NLS++ L+IP+P P
Sbjct: 13 KVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPVKEK 72
Query: 225 NNEPNAKRQ 251
E K+Q
Sbjct: 73 EKEERKKQQ 81
>BC000352-1|AAH00352.1| 249|Homo sapiens proteasome (prosome,
macropain) activator subunit 1 (PA28 alpha) protein.
Length = 249
Score = 121 bits (291), Expect = 3e-27
Identities = 55/122 (45%), Positives = 78/122 (63%)
Frame = +2
Query: 314 PNGSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGVSIQEDTLAE 493
P G V CN+ + L+ +KP I++++E NL+ W+ IP+IEDGNNFGV++QE
Sbjct: 100 PCGPVNCNEKIVVLLQRLKPEIKDVIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFEL 159
Query: 494 IQSGRSEAAAFFDQISRYFISRAKIVSKVAKYPHIDDYRRAVRELDEKEYLSLWLVMCEI 673
+ S ++ F QIS+YF R V+K AK PH+ DYR+ V ELDE EY + L++ EI
Sbjct: 160 MTSLHTKLEGFHTQISKYFSERGDAVTKAAKQPHVGDYRQLVHELDEAEYRDIRLMVMEI 219
Query: 674 RN 679
RN
Sbjct: 220 RN 221
Score = 46.0 bits (104), Expect = 1e-04
Identities = 23/69 (33%), Positives = 37/69 (53%)
Frame = +3
Query: 45 KVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 224
KV +++ L K E+L+ FP+KI +L+ L+ NLS++ L+IP+P P
Sbjct: 13 KVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPVKEK 72
Query: 225 NNEPNAKRQ 251
E K+Q
Sbjct: 73 EKEERKKQQ 81
>AF078829-1|AAF02217.1| 249|Homo sapiens proteasome activator PA28
alpha protein.
Length = 249
Score = 121 bits (291), Expect = 3e-27
Identities = 55/122 (45%), Positives = 78/122 (63%)
Frame = +2
Query: 314 PNGSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGVSIQEDTLAE 493
P G V CN+ + L+ +KP I++++E NL+ W+ IP+IEDGNNFGV++QE
Sbjct: 100 PCGPVNCNEKIVVLLQRLKPEIKDVIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFEL 159
Query: 494 IQSGRSEAAAFFDQISRYFISRAKIVSKVAKYPHIDDYRRAVRELDEKEYLSLWLVMCEI 673
+ S ++ F QIS+YF R V+K AK PH+ DYR+ V ELDE EY + L++ EI
Sbjct: 160 MTSLHTKLEGFHTQISKYFSERGDAVTKAAKQPHVGDYRQLVHELDEAEYRDIRLMVMEI 219
Query: 674 RN 679
RN
Sbjct: 220 RN 221
Score = 46.0 bits (104), Expect = 1e-04
Identities = 23/69 (33%), Positives = 37/69 (53%)
Frame = +3
Query: 45 KVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 224
KV +++ L K E+L+ FP+KI +L+ L+ NLS++ L+IP+P P
Sbjct: 13 KVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPVKEK 72
Query: 225 NNEPNAKRQ 251
E K+Q
Sbjct: 73 EKEERKKQQ 81
>CR541743-1|CAG46543.1| 239|Homo sapiens PSME2 protein.
Length = 239
Score = 99.5 bits (237), Expect = 1e-20
Identities = 49/119 (41%), Positives = 72/119 (60%)
Frame = +2
Query: 320 GSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGVSIQEDTLAEIQ 499
G +P N+ + L+ LVKP + L E L+ WI +IPKIEDGN+FGV+IQE L +
Sbjct: 92 GFLPGNEKVLSLLALVKPEVWTLKEKCILVITWIQHLIPKIEDGNDFGVAIQEKVLERVN 151
Query: 500 SGRSEAAAFFDQISRYFISRAKIVSKVAKYPHIDDYRRAVRELDEKEYLSLWLVMCEIR 676
+ +++ AF IS+YF R V+K +K H+ DYR V E DE Y+ L ++ ++R
Sbjct: 152 AVKTKVEAFQTTISKYFSERGDAVAKASKETHVMDYRALVHERDEAAYVELRAMVLDLR 210
Score = 46.4 bits (105), Expect = 9e-05
Identities = 20/70 (28%), Positives = 41/70 (58%)
Frame = +3
Query: 45 KVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 224
+V+ ++ +L +AE + + P+KI+ LN+LL+ + +L+ + L+IPIP PP
Sbjct: 16 QVEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSLRAPLDIPIPDPPPKD 75
Query: 225 NNEPNAKRQR 254
+ K+++
Sbjct: 76 DEMETDKQEK 85
>D45248-1|BAA08205.1| 239|Homo sapiens proteasome activator hPA28
suunit beta protein.
Length = 239
Score = 97.5 bits (232), Expect = 4e-20
Identities = 49/119 (41%), Positives = 71/119 (59%)
Frame = +2
Query: 320 GSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGVSIQEDTLAEIQ 499
G +P N+ + L+ LVKP + L E L+ WI +IPKIEDGN+FGV+IQE L +
Sbjct: 92 GFLPGNEKVLSLLALVKPEVWTLKEKCILVITWIQHLIPKIEDGNDFGVAIQEKVLERVN 151
Query: 500 SGRSEAAAFFDQISRYFISRAKIVSKVAKYPHIDDYRRAVRELDEKEYLSLWLVMCEIR 676
+ +++ AF IS+YF R V+K +K H+ DYR V E DE Y L ++ ++R
Sbjct: 152 AVKTKVEAFQTTISKYFSERGDAVAKASKETHVMDYRALVHERDEAAYGELRAMVLDLR 210
Score = 46.4 bits (105), Expect = 9e-05
Identities = 20/70 (28%), Positives = 41/70 (58%)
Frame = +3
Query: 45 KVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 224
+V+ ++ +L +AE + + P+KI+ LN+LL+ + +L+ + L+IPIP PP
Sbjct: 16 QVEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSLRAPLDIPIPDPPPKD 75
Query: 225 NNEPNAKRQR 254
+ K+++
Sbjct: 76 DEMETDKQEK 85
>CR541657-1|CAG46458.1| 239|Homo sapiens PSME2 protein.
Length = 239
Score = 97.5 bits (232), Expect = 4e-20
Identities = 49/119 (41%), Positives = 71/119 (59%)
Frame = +2
Query: 320 GSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGVSIQEDTLAEIQ 499
G +P N+ + L+ LVKP + L E L+ WI +IPKIEDGN+FGV+IQE L +
Sbjct: 92 GFLPGNEKVLSLLALVKPEVWTLKEKCILVITWIQHLIPKIEDGNDFGVAIQEKVLERVN 151
Query: 500 SGRSEAAAFFDQISRYFISRAKIVSKVAKYPHIDDYRRAVRELDEKEYLSLWLVMCEIR 676
+ +++ AF IS+YF R V+K +K H+ DYR V E DE Y L ++ ++R
Sbjct: 152 AVKTKVEAFQTTISKYFSERGDAVAKASKETHVMDYRALVHERDEAAYGELRAMVLDLR 210
Score = 46.4 bits (105), Expect = 9e-05
Identities = 20/70 (28%), Positives = 41/70 (58%)
Frame = +3
Query: 45 KVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 224
+V+ ++ +L +AE + + P+KI+ LN+LL+ + +L+ + L+IPIP PP
Sbjct: 16 QVEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSLRAPLDIPIPDPPPKD 75
Query: 225 NNEPNAKRQR 254
+ K+++
Sbjct: 76 DEMETDKQEK 85
>BC072025-1|AAH72025.1| 239|Homo sapiens proteasome (prosome,
macropain) activator subunit 2 (PA28 beta) protein.
Length = 239
Score = 97.5 bits (232), Expect = 4e-20
Identities = 49/119 (41%), Positives = 71/119 (59%)
Frame = +2
Query: 320 GSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGVSIQEDTLAEIQ 499
G +P N+ + L+ LVKP + L E L+ WI +IPKIEDGN+FGV+IQE L +
Sbjct: 92 GFLPGNEKVLSLLALVKPEVWTLKEKCILVITWIQHLIPKIEDGNDFGVAIQEKVLERVN 151
Query: 500 SGRSEAAAFFDQISRYFISRAKIVSKVAKYPHIDDYRRAVRELDEKEYLSLWLVMCEIR 676
+ +++ AF IS+YF R V+K +K H+ DYR V E DE Y L ++ ++R
Sbjct: 152 AVKTKVEAFQTTISKYFSERGDAVAKASKETHVMDYRALVHERDEAAYGELRAMVLDLR 210
Score = 46.4 bits (105), Expect = 9e-05
Identities = 20/70 (28%), Positives = 41/70 (58%)
Frame = +3
Query: 45 KVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 224
+V+ ++ +L +AE + + P+KI+ LN+LL+ + +L+ + L+IPIP PP
Sbjct: 16 QVEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSLRAPLDIPIPDPPPKD 75
Query: 225 NNEPNAKRQR 254
+ K+++
Sbjct: 76 DEMETDKQEK 85
>BC019885-1|AAH19885.1| 239|Homo sapiens proteasome (prosome,
macropain) activator subunit 2 (PA28 beta) protein.
Length = 239
Score = 97.5 bits (232), Expect = 4e-20
Identities = 49/119 (41%), Positives = 71/119 (59%)
Frame = +2
Query: 320 GSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGVSIQEDTLAEIQ 499
G +P N+ + L+ LVKP + L E L+ WI +IPKIEDGN+FGV+IQE L +
Sbjct: 92 GFLPGNEKVLSLLALVKPEVWTLKEKCILVITWIQHLIPKIEDGNDFGVAIQEKVLERVN 151
Query: 500 SGRSEAAAFFDQISRYFISRAKIVSKVAKYPHIDDYRRAVRELDEKEYLSLWLVMCEIR 676
+ +++ AF IS+YF R V+K +K H+ DYR V E DE Y L ++ ++R
Sbjct: 152 AVKTKVEAFQTTISKYFSERGDAVAKASKETHVMDYRALVHERDEAAYGELRAMVLDLR 210
Score = 46.4 bits (105), Expect = 9e-05
Identities = 20/70 (28%), Positives = 41/70 (58%)
Frame = +3
Query: 45 KVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 224
+V+ ++ +L +AE + + P+KI+ LN+LL+ + +L+ + L+IPIP PP
Sbjct: 16 QVEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSLRAPLDIPIPDPPPKD 75
Query: 225 NNEPNAKRQR 254
+ K+++
Sbjct: 76 DEMETDKQEK 85
>BC004368-1|AAH04368.1| 239|Homo sapiens proteasome (prosome,
macropain) activator subunit 2 (PA28 beta) protein.
Length = 239
Score = 97.5 bits (232), Expect = 4e-20
Identities = 49/119 (41%), Positives = 71/119 (59%)
Frame = +2
Query: 320 GSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGVSIQEDTLAEIQ 499
G +P N+ + L+ LVKP + L E L+ WI +IPKIEDGN+FGV+IQE L +
Sbjct: 92 GFLPGNEKVLSLLALVKPEVWTLKEKCILVITWIQHLIPKIEDGNDFGVAIQEKVLERVN 151
Query: 500 SGRSEAAAFFDQISRYFISRAKIVSKVAKYPHIDDYRRAVRELDEKEYLSLWLVMCEIR 676
+ +++ AF IS+YF R V+K +K H+ DYR V E DE Y L ++ ++R
Sbjct: 152 AVKTKVEAFQTTISKYFSERGDAVAKASKETHVMDYRALVHERDEAAYGELRAMVLDLR 210
Score = 46.4 bits (105), Expect = 9e-05
Identities = 20/70 (28%), Positives = 41/70 (58%)
Frame = +3
Query: 45 KVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 224
+V+ ++ +L +AE + + P+KI+ LN+LL+ + +L+ + L+IPIP PP
Sbjct: 16 QVEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSLRAPLDIPIPDPPPKD 75
Query: 225 NNEPNAKRQR 254
+ K+++
Sbjct: 76 DEMETDKQEK 85
>AY771595-1|AAX11425.1| 239|Homo sapiens cell migration-inducing
protein 22 protein.
Length = 239
Score = 97.5 bits (232), Expect = 4e-20
Identities = 49/119 (41%), Positives = 71/119 (59%)
Frame = +2
Query: 320 GSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGVSIQEDTLAEIQ 499
G +P N+ + L+ LVKP + L E L+ WI +IPKIEDGN+FGV+IQE L +
Sbjct: 92 GFLPGNEKVLSLLALVKPEVWTLKEKCILVITWIQHLIPKIEDGNDFGVAIQEKVLERVN 151
Query: 500 SGRSEAAAFFDQISRYFISRAKIVSKVAKYPHIDDYRRAVRELDEKEYLSLWLVMCEIR 676
+ +++ AF IS+YF R V+K +K H+ DYR V E DE Y L ++ ++R
Sbjct: 152 AVKTKVEAFQTTISKYFSERGDAVAKASKETHVMDYRALVHERDEAAYGELRAMVLDLR 210
Score = 46.4 bits (105), Expect = 9e-05
Identities = 20/70 (28%), Positives = 41/70 (58%)
Frame = +3
Query: 45 KVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 224
+V+ ++ +L +AE + + P+KI+ LN+LL+ + +L+ + L+IPIP PP
Sbjct: 16 QVEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSLRAPLDIPIPDPPPKD 75
Query: 225 NNEPNAKRQR 254
+ K+++
Sbjct: 76 DEMETDKQEK 85
>AF079558-1|AAF02218.1| 239|Homo sapiens proteasome activator PA28
beta protein.
Length = 239
Score = 97.5 bits (232), Expect = 4e-20
Identities = 49/119 (41%), Positives = 71/119 (59%)
Frame = +2
Query: 320 GSVPCNKPLSDLIHLVKPHIRELVEDSNLLKMWISFMIPKIEDGNNFGVSIQEDTLAEIQ 499
G +P N+ + L+ LVKP + L E L+ WI +IPKIEDGN+FGV+IQE L +
Sbjct: 92 GFLPGNEKVLSLLALVKPEVWTLKEKCILVITWIQHLIPKIEDGNDFGVAIQEKVLERVN 151
Query: 500 SGRSEAAAFFDQISRYFISRAKIVSKVAKYPHIDDYRRAVRELDEKEYLSLWLVMCEIR 676
+ +++ AF IS+YF R V+K +K H+ DYR V E DE Y L ++ ++R
Sbjct: 152 AVKTKVEAFQTTISKYFSERGDAVAKASKETHVMDYRALVHERDEAAYGELRAMVLDLR 210
Score = 46.4 bits (105), Expect = 9e-05
Identities = 20/70 (28%), Positives = 41/70 (58%)
Frame = +3
Query: 45 KVQDYKDSLKLKAEHLIIKGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATS 224
+V+ ++ +L +AE + + P+KI+ LN+LL+ + +L+ + L+IPIP PP
Sbjct: 16 QVEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSLRAPLDIPIPDPPPKD 75
Query: 225 NNEPNAKRQR 254
+ K+++
Sbjct: 76 DEMETDKQEK 85
>U25756-1|AAA93227.1| 54|Homo sapiens Ki nuclear autoantigen
protein.
Length = 54
Score = 44.8 bits (101), Expect = 3e-04
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +2
Query: 290 EGTRVYVLPNGSVPCNKPLSDLIHLVKPHIRELVEDSN 403
+GT+V+V+PNG + N+ L D+I VKP IR L+E N
Sbjct: 16 QGTKVFVMPNGMLKSNQQLVDIIEKVKPEIRLLIEKCN 53
>AB065599-1|BAC05827.1| 388|Homo sapiens seven transmembrane helix
receptor protein.
Length = 388
Score = 35.9 bits (79), Expect = 0.13
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = -1
Query: 353 DH*VACCRVLNHSAVHKP--VFLLWLSCWITPMSPSLTFSIWL 231
D +A CR L + A+ P +LL +CW+ + +L F+IWL
Sbjct: 130 DRFLAICRPLRYGAIMSPQLCYLLATTCWLAGIPVALVFTIWL 172
>BC142609-1|AAI42610.1| 658|Homo sapiens MYPN protein protein.
Length = 658
Score = 29.9 bits (64), Expect = 8.8
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +3
Query: 99 KGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSNNEPN 239
K K+ N++++ ++ +LS+ + ++PIP P T +NE N
Sbjct: 179 KNHKSKLESQNKVMQENSSSFSDLSERRERSSVPIPIPADTRDNEVN 225
>AL834247-1|CAD38923.2| 1391|Homo sapiens hypothetical protein
protein.
Length = 1391
Score = 29.9 bits (64), Expect = 8.8
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +3
Query: 99 KGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSNNEPN 239
K K+ N++++ ++ +LS+ + ++PIP P T +NE N
Sbjct: 250 KNHKSKLESQNKVMQENSSSFSDLSERRERSSVPIPIPADTRDNEVN 296
>AL832002-1|CAD89906.1| 1320|Homo sapiens hypothetical protein
protein.
Length = 1320
Score = 29.9 bits (64), Expect = 8.8
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +3
Query: 99 KGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSNNEPN 239
K K+ N++++ ++ +LS+ + ++PIP P T +NE N
Sbjct: 179 KNHKSKLESQNKVMQENSSSFSDLSERRERSSVPIPIPADTRDNEVN 225
>AL512429-2|CAH73748.1| 1320|Homo sapiens sarcomeric protein
myopalladin, 145 kDa (MYOP) protein.
Length = 1320
Score = 29.9 bits (64), Expect = 8.8
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +3
Query: 99 KGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSNNEPN 239
K K+ N++++ ++ +LS+ + ++PIP P T +NE N
Sbjct: 179 KNHKSKLESQNKVMQENSSSFSDLSERRERSSVPIPIPADTRDNEVN 225
>AK027343-1|BAB55048.1| 507|Homo sapiens .117). protein.
Length = 507
Score = 29.9 bits (64), Expect = 8.8
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +3
Query: 99 KGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSNNEPN 239
K K+ N++++ ++ +LS+ + ++PIP P T +NE N
Sbjct: 179 KNHKSKLESQNKVMQENSSSFSDLSERRERSSVPIPIPADTRDNEVN 225
>AF328296-1|AAK50625.1| 1320|Homo sapiens myopalladin protein.
Length = 1320
Score = 29.9 bits (64), Expect = 8.8
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +3
Query: 99 KGFPEKIVKLNELLETSNFQNRNLSDVHQDLNIPIPTPPATSNNEPN 239
K K+ N++++ ++ +LS+ + ++PIP P T +NE N
Sbjct: 179 KNHKSKLESQNKVMQENSSSFSDLSERRERSSVPIPIPADTRDNEVN 225
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,181,358
Number of Sequences: 237096
Number of extensions: 2009997
Number of successful extensions: 8806
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8805
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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