Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0119
         (661 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    25   0.55 
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   2.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.9  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   9.0  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 25.0 bits (52), Expect = 0.55
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 529 RKLHLLSIPITKSYLTDDIRCYV 597
           +KLHL + PI+K      + CY+
Sbjct: 506 KKLHLKNSPISKKVRPPQVLCYI 528


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 90  WEIL*ENRNLFRIFSNISISMFEI 161
           W I     N FR +SN S+ +F+I
Sbjct: 58  WSIF-NKWNQFRSYSNFSVFLFDI 80


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory
          receptor candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 32 CYNXKRIFHIVC 67
          CYN +RI++  C
Sbjct: 50 CYNLRRIYYFYC 61


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 657 HHLKNPQSI 631
           HHL NPQS+
Sbjct: 260 HHLVNPQSL 268


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,593
Number of Sequences: 336
Number of extensions: 2771
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)