Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0114
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    24   0.94 
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    24   0.94 
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    24   0.94 
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    24   0.94 
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    24   0.94 
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    24   0.94 
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    24   0.94 
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    24   0.94 
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     24   1.2  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   1.6  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    23   2.9  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    23   2.9  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   3.8  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   5.0  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   5.0  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   8.8  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   8.8  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   8.8  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   8.8  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 12/49 (24%), Positives = 21/49 (42%)
 Frame = +2

Query: 383 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLSKSTIPS 529
           H + P    Y   + +R+A+     P   TH   + +Y D  S + + S
Sbjct: 64  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVAS 112


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 12/49 (24%), Positives = 21/49 (42%)
 Frame = +2

Query: 383 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLSKSTIPS 529
           H + P    Y   + +R+A+     P   TH   + +Y D  S + + S
Sbjct: 64  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVAS 112


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 12/49 (24%), Positives = 21/49 (42%)
 Frame = +2

Query: 383 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLSKSTIPS 529
           H + P    Y   + +R+A+     P   TH   + +Y D  S + + S
Sbjct: 64  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVAS 112


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 12/49 (24%), Positives = 21/49 (42%)
 Frame = +2

Query: 383 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLSKSTIPS 529
           H + P    Y   + +R+A+     P   TH   + +Y D  S + + S
Sbjct: 64  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVAS 112


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 12/49 (24%), Positives = 21/49 (42%)
 Frame = +2

Query: 383 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLSKSTIPS 529
           H + P    Y   + +R+A+     P   TH   + +Y D  S + + S
Sbjct: 64  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVAS 112


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 12/49 (24%), Positives = 21/49 (42%)
 Frame = +2

Query: 383 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLSKSTIPS 529
           H + P    Y   + +R+A+     P   TH   + +Y D  S + + S
Sbjct: 20  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVAS 68


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 12/49 (24%), Positives = 21/49 (42%)
 Frame = +2

Query: 383 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLSKSTIPS 529
           H + P    Y   + +R+A+     P   TH   + +Y D  S + + S
Sbjct: 64  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVAS 112


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 12/49 (24%), Positives = 21/49 (42%)
 Frame = +2

Query: 383 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLSKSTIPS 529
           H + P    Y   + +R+A+     P   TH   + +Y D  S + + S
Sbjct: 64  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVAS 112


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -3

Query: 189 KSPGASTRATCGDRLTVSVHTHRQVCPTSMLW 94
           K PG S     GD + + V  H     T++ W
Sbjct: 104 KMPGPSVEVCLGDEVIIDVVNHLSSDSTTIHW 135


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/49 (24%), Positives = 20/49 (40%)
 Frame = +2

Query: 383 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLSKSTIPS 529
           H + P    Y   + +R+A      P   TH   + +Y D  S + + S
Sbjct: 64  HGLQPTMGDYTQLQPQRLAPTHLQSPNTQTHPSASCKYADSTSSTGVAS 112


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -1

Query: 635 RWCPRRPKLRPP 600
           +WCPRR    PP
Sbjct: 118 KWCPRREWSSPP 129


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -1

Query: 635 RWCPRRPKLRPP 600
           +WCPRR    PP
Sbjct: 274 KWCPRREWSSPP 285


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -1

Query: 596 IIHKFPDSNLMKSIIFVVAMSNWMESL 516
           II +F    L   +  VV +SNW E L
Sbjct: 239 IIARFNIERLCNGLKRVVKLSNWREPL 265


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = -3

Query: 183 PGASTRATCGDRLTVSVHTHRQVCPTSMLW 94
           PG S +   GD++ + V  H +    ++ W
Sbjct: 172 PGPSIQVCEGDKVVIDVENHIEGNEVTLHW 201



 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 51  MARGPKKHLKRLNAPKAWMLDKLG 122
           + R P +++K++N   A  LD+ G
Sbjct: 609 IGRSPDQNVKKINLKHALDLDRRG 632


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = -3

Query: 183 PGASTRATCGDRLTVSVHTHRQVCPTSMLW 94
           PG S +   GD++ + V  H +    ++ W
Sbjct: 172 PGPSIQVCEGDKVVIDVENHIEGNEVTLHW 201



 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 51  MARGPKKHLKRLNAPKAWMLDKLG 122
           + R P +++K++N   A  LD+ G
Sbjct: 609 IGRSPDQNVKKINLKHALDLDRQG 632


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +3

Query: 399 RRLSTSCVKSSVWRPDLRMFR 461
           R+++  C+KS  WR  L + +
Sbjct: 525 RKVTFQCLKSIAWRAFLAVLK 545


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +2

Query: 545 LRRLWTSSSLSPGTCV*SREAVTWGAVGT 631
           L+ ++  S  SP T + +   ++W AV T
Sbjct: 218 LQHIFVKSRPSPATIISNVTVISWQAVCT 246


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +2

Query: 545 LRRLWTSSSLSPGTCV*SREAVTWGAVGT 631
           L+ ++  S  SP T + +   ++W AV T
Sbjct: 218 LQHIFVKSRPSPATIISNVTVISWQAVCT 246


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +2

Query: 545 LRRLWTSSSLSPGTCV*SREAVTWGAVGT 631
           L+ ++  S  SP T + +   ++W AV T
Sbjct: 538 LQHIFVKSRPSPATIISNVTVISWQAVCT 566


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,006
Number of Sequences: 336
Number of extensions: 3426
Number of successful extensions: 22
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)