Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0114
(650 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X iso... 159 1e-38
M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar prot... 159 1e-38
CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein. 159 1e-38
BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein. 159 1e-38
BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein. 159 1e-38
BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4, X... 159 1e-38
BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein. 159 1e-38
BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4, X... 159 1e-38
AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4, X... 159 1e-38
AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X ... 159 1e-38
M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y iso... 151 2e-36
BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein. 151 2e-36
BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4, Y... 151 2e-36
BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4, Y... 151 2e-36
AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4, Y... 151 2e-36
AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y ... 151 2e-36
AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4 pr... 146 8e-35
Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4 prot... 113 7e-25
AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein. 32 1.5
BC045609-1|AAH45609.1| 1208|Homo sapiens hypothetical protein FL... 32 2.0
AK023197-1|BAB14457.1| 766|Homo sapiens protein ( Homo sapiens ... 32 2.0
AB051523-1|BAB21827.1| 1244|Homo sapiens KIAA1736 protein protein. 32 2.0
AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens ... 31 3.6
AB076400-1|BAB86868.1| 1097|Homo sapiens fat3 protein. 30 6.2
AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta ch... 30 8.2
>M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X
isoform protein.
Length = 263
Score = 159 bits (385), Expect = 1e-38
Identities = 75/136 (55%), Positives = 89/136 (65%)
Frame = +2
Query: 242 CETTLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 421
C IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLC
Sbjct: 65 CMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLC 124
Query: 422 KVKRVATGPKNVPYLVTHDGRTIRYPDPLSKSTIPSS*TLQLRRLWTSSSLSPGTCV*SR 601
KV+++ G K +P+LVTHD RTIRYPDPL K L+ ++ G
Sbjct: 125 KVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVT 184
Query: 602 EAVTWGAVGTIVSRER 649
G +G I +RER
Sbjct: 185 GGANLGRIGVITNRER 200
Score = 127 bits (307), Expect = 3e-29
Identities = 58/68 (85%), Positives = 62/68 (91%)
Frame = +3
Query: 51 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 230
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 231 VLKIVKQR 254
V KI QR
Sbjct: 61 VKKICMQR 68
>M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar protein
mRNA, complete cds. ).
Length = 244
Score = 159 bits (385), Expect = 1e-38
Identities = 75/136 (55%), Positives = 89/136 (65%)
Frame = +2
Query: 242 CETTLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 421
C IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLC
Sbjct: 46 CMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLC 105
Query: 422 KVKRVATGPKNVPYLVTHDGRTIRYPDPLSKSTIPSS*TLQLRRLWTSSSLSPGTCV*SR 601
KV+++ G K +P+LVTHD RTIRYPDPL K L+ ++ G
Sbjct: 106 KVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVT 165
Query: 602 EAVTWGAVGTIVSRER 649
G +G I +RER
Sbjct: 166 GGANLGRIGVITNRER 181
Score = 87.8 bits (208), Expect = 3e-17
Identities = 42/50 (84%), Positives = 45/50 (90%)
Frame = +3
Query: 105 MLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 254
MLDKL GV+APRPS GPHKLRECLPL+IFLRNRLKYALTG+EV KI QR
Sbjct: 1 MLDKLTGVFAPRPS-GPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQR 49
>CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein.
Length = 263
Score = 159 bits (385), Expect = 1e-38
Identities = 75/136 (55%), Positives = 89/136 (65%)
Frame = +2
Query: 242 CETTLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 421
C IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLC
Sbjct: 65 CMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLC 124
Query: 422 KVKRVATGPKNVPYLVTHDGRTIRYPDPLSKSTIPSS*TLQLRRLWTSSSLSPGTCV*SR 601
KV+++ G K +P+LVTHD RTIRYPDPL K L+ ++ G
Sbjct: 125 KVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVT 184
Query: 602 EAVTWGAVGTIVSRER 649
G +G I +RER
Sbjct: 185 GGANLGRIGVITNRER 200
Score = 127 bits (307), Expect = 3e-29
Identities = 58/68 (85%), Positives = 62/68 (91%)
Frame = +3
Query: 51 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 230
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 231 VLKIVKQR 254
V KI QR
Sbjct: 61 VKKICMQR 68
>BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 159 bits (385), Expect = 1e-38
Identities = 75/136 (55%), Positives = 89/136 (65%)
Frame = +2
Query: 242 CETTLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 421
C IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLC
Sbjct: 65 CMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLC 124
Query: 422 KVKRVATGPKNVPYLVTHDGRTIRYPDPLSKSTIPSS*TLQLRRLWTSSSLSPGTCV*SR 601
KV+++ G K +P+LVTHD RTIRYPDPL K L+ ++ G
Sbjct: 125 KVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVT 184
Query: 602 EAVTWGAVGTIVSRER 649
G +G I +RER
Sbjct: 185 GGANLGRIGVITNRER 200
Score = 127 bits (307), Expect = 3e-29
Identities = 58/68 (85%), Positives = 62/68 (91%)
Frame = +3
Query: 51 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 230
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 231 VLKIVKQR 254
V KI QR
Sbjct: 61 VKKICMQR 68
>BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 159 bits (385), Expect = 1e-38
Identities = 75/136 (55%), Positives = 89/136 (65%)
Frame = +2
Query: 242 CETTLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 421
C IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLC
Sbjct: 65 CMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLC 124
Query: 422 KVKRVATGPKNVPYLVTHDGRTIRYPDPLSKSTIPSS*TLQLRRLWTSSSLSPGTCV*SR 601
KV+++ G K +P+LVTHD RTIRYPDPL K L+ ++ G
Sbjct: 125 KVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVT 184
Query: 602 EAVTWGAVGTIVSRER 649
G +G I +RER
Sbjct: 185 GGANLGRIGVITNRER 200
Score = 127 bits (307), Expect = 3e-29
Identities = 58/68 (85%), Positives = 62/68 (91%)
Frame = +3
Query: 51 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 230
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 231 VLKIVKQR 254
V KI QR
Sbjct: 61 VKKICMQR 68
>BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 159 bits (385), Expect = 1e-38
Identities = 75/136 (55%), Positives = 89/136 (65%)
Frame = +2
Query: 242 CETTLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 421
C IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLC
Sbjct: 65 CMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLC 124
Query: 422 KVKRVATGPKNVPYLVTHDGRTIRYPDPLSKSTIPSS*TLQLRRLWTSSSLSPGTCV*SR 601
KV+++ G K +P+LVTHD RTIRYPDPL K L+ ++ G
Sbjct: 125 KVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVT 184
Query: 602 EAVTWGAVGTIVSRER 649
G +G I +RER
Sbjct: 185 GGANLGRIGVITNRER 200
Score = 127 bits (307), Expect = 3e-29
Identities = 58/68 (85%), Positives = 62/68 (91%)
Frame = +3
Query: 51 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 230
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 231 VLKIVKQR 254
V KI QR
Sbjct: 61 VKKICMQR 68
>BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein.
Length = 243
Score = 159 bits (385), Expect = 1e-38
Identities = 75/136 (55%), Positives = 89/136 (65%)
Frame = +2
Query: 242 CETTLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 421
C IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLC
Sbjct: 45 CMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLC 104
Query: 422 KVKRVATGPKNVPYLVTHDGRTIRYPDPLSKSTIPSS*TLQLRRLWTSSSLSPGTCV*SR 601
KV+++ G K +P+LVTHD RTIRYPDPL K L+ ++ G
Sbjct: 105 KVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVT 164
Query: 602 EAVTWGAVGTIVSRER 649
G +G I +RER
Sbjct: 165 GGANLGRIGVITNRER 180
Score = 90.6 bits (215), Expect = 4e-18
Identities = 41/48 (85%), Positives = 44/48 (91%)
Frame = +3
Query: 111 DKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQR 254
DKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR
Sbjct: 1 DKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQR 48
>BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 159 bits (385), Expect = 1e-38
Identities = 75/136 (55%), Positives = 89/136 (65%)
Frame = +2
Query: 242 CETTLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 421
C IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLC
Sbjct: 65 CMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLC 124
Query: 422 KVKRVATGPKNVPYLVTHDGRTIRYPDPLSKSTIPSS*TLQLRRLWTSSSLSPGTCV*SR 601
KV+++ G K +P+LVTHD RTIRYPDPL K L+ ++ G
Sbjct: 125 KVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVT 184
Query: 602 EAVTWGAVGTIVSRER 649
G +G I +RER
Sbjct: 185 GGANLGRIGVITNRER 200
Score = 127 bits (307), Expect = 3e-29
Identities = 58/68 (85%), Positives = 62/68 (91%)
Frame = +3
Query: 51 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 230
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 231 VLKIVKQR 254
V KI QR
Sbjct: 61 VKKICMQR 68
>AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4,
X-linked X isoform variant protein.
Length = 263
Score = 159 bits (385), Expect = 1e-38
Identities = 75/136 (55%), Positives = 89/136 (65%)
Frame = +2
Query: 242 CETTLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 421
C IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLC
Sbjct: 65 CMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLC 124
Query: 422 KVKRVATGPKNVPYLVTHDGRTIRYPDPLSKSTIPSS*TLQLRRLWTSSSLSPGTCV*SR 601
KV+++ G K +P+LVTHD RTIRYPDPL K L+ ++ G
Sbjct: 125 KVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVT 184
Query: 602 EAVTWGAVGTIVSRER 649
G +G I +RER
Sbjct: 185 GGANLGRIGVITNRER 200
Score = 125 bits (302), Expect = 1e-28
Identities = 57/68 (83%), Positives = 61/68 (89%)
Frame = +3
Query: 51 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 230
MARGPKKHLKR+ APK WMLDKL GV+AP PSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPHPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 231 VLKIVKQR 254
V KI QR
Sbjct: 61 VKKICMQR 68
>AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X
isoform protein.
Length = 263
Score = 159 bits (385), Expect = 1e-38
Identities = 75/136 (55%), Positives = 89/136 (65%)
Frame = +2
Query: 242 CETTLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 421
C IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLC
Sbjct: 65 CMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLC 124
Query: 422 KVKRVATGPKNVPYLVTHDGRTIRYPDPLSKSTIPSS*TLQLRRLWTSSSLSPGTCV*SR 601
KV+++ G K +P+LVTHD RTIRYPDPL K L+ ++ G
Sbjct: 125 KVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVT 184
Query: 602 EAVTWGAVGTIVSRER 649
G +G I +RER
Sbjct: 185 GGANLGRIGVITNRER 200
Score = 127 bits (307), Expect = 3e-29
Identities = 58/68 (85%), Positives = 62/68 (91%)
Frame = +3
Query: 51 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 230
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 231 VLKIVKQR 254
V KI QR
Sbjct: 61 VKKICMQR 68
>M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y
isoform protein.
Length = 263
Score = 151 bits (367), Expect = 2e-36
Identities = 73/136 (53%), Positives = 86/136 (63%)
Frame = +2
Query: 242 CETTLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 421
C IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLC
Sbjct: 65 CMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLC 124
Query: 422 KVKRVATGPKNVPYLVTHDGRTIRYPDPLSKSTIPSS*TLQLRRLWTSSSLSPGTCV*SR 601
KV+++ G K +P+LVTHD RTIRYPDP+ K L ++ G
Sbjct: 125 KVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVI 184
Query: 602 EAVTWGAVGTIVSRER 649
G VG I +RER
Sbjct: 185 GGANLGRVGVITNRER 200
Score = 127 bits (306), Expect = 4e-29
Identities = 57/68 (83%), Positives = 62/68 (91%)
Frame = +3
Query: 51 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 230
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 231 VLKIVKQR 254
V KI QR
Sbjct: 61 VKKICMQR 68
>BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein.
Length = 262
Score = 151 bits (367), Expect = 2e-36
Identities = 73/136 (53%), Positives = 86/136 (63%)
Frame = +2
Query: 242 CETTLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 421
C IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLC
Sbjct: 64 CMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLC 123
Query: 422 KVKRVATGPKNVPYLVTHDGRTIRYPDPLSKSTIPSS*TLQLRRLWTSSSLSPGTCV*SR 601
KV+++ G K +P+LVTHD RTIRYPDP+ K L ++ G
Sbjct: 124 KVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVI 183
Query: 602 EAVTWGAVGTIVSRER 649
G VG I +RER
Sbjct: 184 GGANLGRVGVITNRER 199
Score = 125 bits (301), Expect = 2e-28
Identities = 56/67 (83%), Positives = 61/67 (91%)
Frame = +3
Query: 54 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEV 233
ARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV
Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEV 60
Query: 234 LKIVKQR 254
KI QR
Sbjct: 61 KKICMQR 67
>BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 151 bits (367), Expect = 2e-36
Identities = 73/136 (53%), Positives = 86/136 (63%)
Frame = +2
Query: 242 CETTLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 421
C IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLC
Sbjct: 65 CMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLC 124
Query: 422 KVKRVATGPKNVPYLVTHDGRTIRYPDPLSKSTIPSS*TLQLRRLWTSSSLSPGTCV*SR 601
KV+++ G K +P+LVTHD RTIRYPDP+ K L ++ G
Sbjct: 125 KVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVI 184
Query: 602 EAVTWGAVGTIVSRER 649
G VG I +RER
Sbjct: 185 GGANLGRVGVITNRER 200
Score = 127 bits (306), Expect = 4e-29
Identities = 57/68 (83%), Positives = 62/68 (91%)
Frame = +3
Query: 51 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 230
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 231 VLKIVKQR 254
V KI QR
Sbjct: 61 VKKICMQR 68
>BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 151 bits (367), Expect = 2e-36
Identities = 73/136 (53%), Positives = 86/136 (63%)
Frame = +2
Query: 242 CETTLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 421
C IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLC
Sbjct: 65 CMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLC 124
Query: 422 KVKRVATGPKNVPYLVTHDGRTIRYPDPLSKSTIPSS*TLQLRRLWTSSSLSPGTCV*SR 601
KV+++ G K +P+LVTHD RTIRYPDP+ K L ++ G
Sbjct: 125 KVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVI 184
Query: 602 EAVTWGAVGTIVSRER 649
G VG I +RER
Sbjct: 185 GGANLGRVGVITNRER 200
Score = 127 bits (306), Expect = 4e-29
Identities = 57/68 (83%), Positives = 62/68 (91%)
Frame = +3
Query: 51 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 230
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 231 VLKIVKQR 254
V KI QR
Sbjct: 61 VKKICMQR 68
>AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 Y isoform variant protein.
Length = 263
Score = 151 bits (367), Expect = 2e-36
Identities = 73/136 (53%), Positives = 86/136 (63%)
Frame = +2
Query: 242 CETTLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 421
C IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLC
Sbjct: 65 CMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLC 124
Query: 422 KVKRVATGPKNVPYLVTHDGRTIRYPDPLSKSTIPSS*TLQLRRLWTSSSLSPGTCV*SR 601
KV+++ G K +P+LVTHD RTIRYPDP+ K L ++ G
Sbjct: 125 KVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVI 184
Query: 602 EAVTWGAVGTIVSRER 649
G VG I +RER
Sbjct: 185 GGANLGRVGVITNRER 200
Score = 127 bits (306), Expect = 4e-29
Identities = 57/68 (83%), Positives = 62/68 (91%)
Frame = +3
Query: 51 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 230
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 231 VLKIVKQR 254
V KI QR
Sbjct: 61 VKKICMQR 68
>AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y
isoform protein.
Length = 263
Score = 151 bits (367), Expect = 2e-36
Identities = 73/136 (53%), Positives = 86/136 (63%)
Frame = +2
Query: 242 CETTLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 421
C IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLC
Sbjct: 65 CMQRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLC 124
Query: 422 KVKRVATGPKNVPYLVTHDGRTIRYPDPLSKSTIPSS*TLQLRRLWTSSSLSPGTCV*SR 601
KV+++ G K +P+LVTHD RTIRYPDP+ K L ++ G
Sbjct: 125 KVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVI 184
Query: 602 EAVTWGAVGTIVSRER 649
G VG I +RER
Sbjct: 185 GGANLGRVGVITNRER 200
Score = 127 bits (306), Expect = 4e-29
Identities = 57/68 (83%), Positives = 62/68 (91%)
Frame = +3
Query: 51 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 230
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 231 VLKIVKQR 254
V KI QR
Sbjct: 61 VKKICMQR 68
>AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4
protein.
Length = 263
Score = 146 bits (353), Expect = 8e-35
Identities = 70/136 (51%), Positives = 86/136 (63%)
Frame = +2
Query: 242 CETTLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 421
C +K+DGKVR D TYPAGF+DV+SIEKT E FRL+Y+ KG F +HRIT EEAKYKLC
Sbjct: 65 CMQHFLKIDGKVRVDITYPAGFIDVISIEKTGEHFRLVYNTKGCFAVHRITVEEAKYKLC 124
Query: 422 KVKRVATGPKNVPYLVTHDGRTIRYPDPLSKSTIPSS*TLQLRRLWTSSSLSPGTCV*SR 601
KV+++ G K +P+LVTHD RTIRYPDPL K L ++ + G
Sbjct: 125 KVRKITVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNVCMVI 184
Query: 602 EAVTWGAVGTIVSRER 649
G VG I +RER
Sbjct: 185 AGANLGRVGVITNRER 200
Score = 125 bits (301), Expect = 2e-28
Identities = 56/67 (83%), Positives = 61/67 (91%)
Frame = +3
Query: 51 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 230
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 231 VLKIVKQ 251
V KI Q
Sbjct: 61 VKKICMQ 67
>Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4
protein.
Length = 59
Score = 113 bits (271), Expect = 7e-25
Identities = 50/56 (89%), Positives = 53/56 (94%)
Frame = +3
Query: 51 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYAL 218
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYAL
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYAL 56
>AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein.
Length = 182
Score = 32.3 bits (70), Expect = 1.5
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 290 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 436
+YPA + D I + E+FRL+ + + RI + K C ++RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRRICASASAPKTCSIERV 144
>BC045609-1|AAH45609.1| 1208|Homo sapiens hypothetical protein
FLJ20294 protein.
Length = 1208
Score = 31.9 bits (69), Expect = 2.0
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 119 WRCVCTETVNRSPQVARVLAPGDFPEESSEVCFDRKRSPENCETTLIKVDGK-VRTDPTY 295
W + T++ +RS V++ D PEESSE R+R E+ +L + DG R P Y
Sbjct: 567 WERIYTQS-SRSGTVSQEALHQDMPEESSEEDSLRRRLLESSLISLSRYDGAGSREHPIY 625
Query: 296 P 298
P
Sbjct: 626 P 626
>AK023197-1|BAB14457.1| 766|Homo sapiens protein ( Homo sapiens
cDNA FLJ13135 fis, clone NT2RP3003078, highly similar to
Rattus norvegicus mRNA for ischemia related factor
NYW-1. ).
Length = 766
Score = 31.9 bits (69), Expect = 2.0
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 119 WRCVCTETVNRSPQVARVLAPGDFPEESSEVCFDRKRSPENCETTLIKVDGK-VRTDPTY 295
W + T++ +RS V++ D PEESSE R+R E+ +L + DG R P Y
Sbjct: 125 WERIYTQS-SRSGTVSQEALHQDMPEESSEEDSLRRRLLESSLISLSRYDGAGSREHPIY 183
Query: 296 P 298
P
Sbjct: 184 P 184
>AB051523-1|BAB21827.1| 1244|Homo sapiens KIAA1736 protein protein.
Length = 1244
Score = 31.9 bits (69), Expect = 2.0
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 119 WRCVCTETVNRSPQVARVLAPGDFPEESSEVCFDRKRSPENCETTLIKVDGK-VRTDPTY 295
W + T++ +RS V++ D PEESSE R+R E+ +L + DG R P Y
Sbjct: 663 WERIYTQS-SRSGTVSQEALHQDMPEESSEEDSLRRRLLESSLISLSRYDGAGSREHPIY 721
Query: 296 P 298
P
Sbjct: 722 P 722
>AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens
cDNA FLJ14103 fis, clone MAMMA1001073. ).
Length = 182
Score = 31.1 bits (67), Expect = 3.6
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +2
Query: 290 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 436
+YPA + D I + E+FRL+ + + +I + K C ++RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRKICASASAPKTCSIERV 144
>AB076400-1|BAB86868.1| 1097|Homo sapiens fat3 protein.
Length = 1097
Score = 30.3 bits (65), Expect = 6.2
Identities = 27/90 (30%), Positives = 38/90 (42%)
Frame = +2
Query: 68 EAFEALKRSQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESSEVCFDRKRSPENCE 247
+ +EAL SQ + + T C P ++ L P FP E+ D P +CE
Sbjct: 969 DQYEALPPSQPVSLASTLSPDCRRRPQFHP--SQYLPPHPFPNET-----DLVGPPASCE 1021
Query: 248 TTLIKVDGKVRTDPTYPAGFMDVVSIEKTN 337
+ V T+PT PA D VS+ N
Sbjct: 1022 FSTFAVSMNQGTEPTGPA---DSVSLSLHN 1048
>AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta chain
VJ region protein.
Length = 76
Score = 29.9 bits (64), Expect = 8.2
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 281 TDPTYPAGFM-DVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATG 445
++ TY +GF+ D I + N F + T+ ++PE++ LC V RV TG
Sbjct: 10 SEATYESGFVIDKFPISRPNLTFSTL-------TVSNMSPEDSSIYLCSVLRVVTG 58
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,425,714
Number of Sequences: 237096
Number of extensions: 2241558
Number of successful extensions: 14308
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 14067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14289
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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